Pungitius pungitius (ninespine stickleback): 119195348
Help
Entry
119195348 CDS
T07626
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ppug04054
]
119195348
Pattern recognition receptors [BR:
ppug04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119195348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NLRC4_HD2
FISNA
NACHT
PYRIN
NOD2_WH
LRR_4
PRY
SPRY
MIB_HERC2
Ctf4_C
Motif
Other DBs
NCBI-GeneID:
119195348
NCBI-ProteinID:
XP_062415537
LinkDB
All DBs
Position
20:573919..591378
Genome browser
AA seq
1103 aa
AA seq
DB search
MEKVKKDILNILKDLKEEEFKEFKWHLENNPIPEDLRSIPPCDLHKADRMDTVDLMVRCY
DTDSVQVAVKVLEEMQMNNLAEKLSKMNFTGELNPGGGDRGQEIFTNCQRELKSNLKERF
QSVFEGIAEAGNSTLLNEIYTELYITKGGTAEVNQEHEVRQIETASWRPARPETTIRRED
LFKASAGRKKPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKDHQDIQFTFPFTFRELNVLK
KKFSLVGLVHEFFSETRAAGICRFKEYQVVFIFDGLDECRLPLDFHNNEILTDVTETSSV
DVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVGMVTEVRGFTDPQKEEYFKKRFRDE
EQASRIISHIKTSRSLHIMCHIPVFCWITATVLEEVLKTREGGELPNTLTEMYIHFLVVQ
SKLKEIKYDERAEKDPHWSPESRKMIESLGKLAFDQLQKGNLIFYESDLTECGIDIRAAS
VCSGVFTQIFRKEKGLSKEVFCFVHLSVQEFLAALHVHLTFISSGVNLLSTSLWFKVFRD
NPKPMCLYQSAVNEALKSPNGHLDLFLRFLLGLSLETNQTAVQGLLTQTGSCSQTNQETV
QYIKEKISENVSPEKSINLFHCLNELDDASLVEEIQQSLRSGRLSKELSPAQWSALAFIL
LSSQEDLEVFDLKKYSASEEVLLRLLPVVKASNKALLSRCNLSKRSCEVLSSVLSSQSSS
LRELDLSNNDLQDSGVKLLCDGLKSPHCHLETLRLSGCNLSKRSCEVLSSVLSSQSSSLR
ELDLSNNDLQDSGVKLLCDGLKNPHCDLKTLSLSSCLTTEEGCASLVSALRSNPSHLREL
DLSYNHPGDSGVKLLSDGVKDPHWRLETLRVEPAGVRWLTPGLEKYSCELTIDTNTVNRE
LKLSDNNRKVTRVKKEEYQSYPDHPDRFDSCRQLLCRTGLTGRCYWEVEWSGEIYVSVSY
RGIKRKGIFYDCWFGYNHQSWSLICSAEGYSVRHNNTETRITSSSFFSSLSSSSGRVAVY
VDCPAGSLTFYRVSSDTLIHLHTFSTTFTEPLYPGFGFGFAFSLRSIVRFFFSPGSVLGS
SVSLCPAGGEPSSLLTTYFSLYN
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagttaagaaggacatcctcaacattttaaaggatctcaaggaggaggagttc
aaagagttcaagtggcacctggaaaacaatccaatcccagaagacctccgatcaatccca
ccctgtgacctgcacaaagcagacaggatggacacagtggacctgatggttcggtgctac
gacacagactcggttcaggtggccgtgaaggttttggaagagatgcaaatgaacaatttg
gctgaaaaattatccaaaatgaactttacaggtgaactgaatcctgggggaggagatcga
ggtcaagagattttcaccaactgtcaacgtgaactcaaatccaacctgaaggagaggttc
cagtctgtgtttgagggcatcgctgaagcaggaaactcaacccttctgaatgagatctac
acagagctctacatcacaaagggagggactgcagaggtcaatcaagaacatgaggtcaga
cagattgaaacagcatcctggagaccagccagaccagaaacaaccatcagacgagaagac
ctcttcaaagcttcagctggaaggaagaaaccaatcagaacagtgatgactaagggagtg
gctggcattgggaaaacagtcttaacacagaagttcactctggactgggctgaagacaaa
gaccaccaggacatacagttcacatttccattcaccttcagagagctgaatgtgctgaag
aagaagttcagcttggtgggacttgttcatgagttcttcagtgaaaccagagcagcagga
atctgcaggtttaaagagtaccaggttgtgttcatctttgacggtctggatgagtgtcga
cttcctctggacttccacaacaatgagatcctgactgatgtcacagagacctcctcagtg
gatgtgctcctcacaaacctcatcagggggaagctgcttccttctgctcgcctctggata
accacacgacctgcagcagccaatcagatccctcctgagtgtgttggcatggtgacagag
gtaagagggttcactgacccccagaaggaggagtacttcaagaagaggttcagggatgag
gagcaggccagcaggatcatctctcacatcaagacctcacgaagcctccacattatgtgc
cacatcccagtcttctgctggatcactgctacagttctggaggaggtgttgaagaccaga
gagggaggagagctgcccaacaccctgactgagatgtacatccacttcctggtggtccag
tccaaactgaaggagatcaagtacgatgaaagagctgagaaggatccacactggagtcct
gagagcaggaagatgatcgagtctctgggaaaactggcctttgatcagctgcagaaagga
aacctgatcttctatgaatccgacctgacagagtgtggcatcgatatcagagcagcctca
gtgtgctcaggagtgttcactcagatctttagaaaggagaaaggactgtccaaggaggtg
ttctgcttcgtccatctgagtgttcaggagtttctggcagctcttcatgtacatctgacc
ttcatcagctctggtgtcaatctgctgtccacctccctgtggtttaaagtctttagagac
aaccccaaaccaatgtgtctttaccagagtgctgtgaacgaggccttaaagagtcctaat
ggacacctggacttgttcctccgcttcctcctgggtctttccctagagaccaatcagact
gccgtacaaggtctgctgacacagacaggaagttgctcacagaccaatcaggagacagtc
cagtacatcaaggagaagatcagtgagaatgtgtctccagagaaaagcatcaatctgttc
cactgtctgaatgaactagatgatgcttctctagtggaggagatccaacagtcccttaga
tcaggacgtctctcaaaggaactgtctccagctcagtggtcagctctggccttcatctta
ctgtcatcacaagaagatctggaggtgtttgacctgaagaaatactctgcttcagaggag
gttcttctgaggctgctgccagtggtcaaagcctccaacaaagctctactgagtcgctgt
aacctctcaaagagaagctgtgaagttctgtcctcagtcctcagctcccagtcctctagt
ctgagagaactggatctgagtaacaacgacctgcaggattcaggagtgaagctgctgtgt
gatggactgaagagtccacactgtcacctggagactctcagactgagtggctgtaacctc
tcaaagagaagctgtgaagttctgtcctcagtcctcagctcccagtcctctagtctgaga
gaactggatctgagtaacaacgacctgcaggattcaggagtgaagctgctgtgtgatgga
ctgaagaatccacactgtgacctgaagactctcagcctgtcaagctgtctgaccacagag
gaaggctgtgcttctctggtctcagctctgagatccaacccctcccacctgagagagctg
gacctgagctacaaccatccaggagactcaggagtaaagctgctgtctgatggagtgaag
gatcctcactggagactggagactctcagggtggagcctgctggagtccgatggttgaca
ccaggtctggagaagtattcctgtgaactcacaatcgacacaaacacagtaaacagagaa
ctcaaactgtctgacaacaacaggaaggtgacacgtgtgaagaaggaggagtatcagtca
tatcctgatcatccagacagatttgactcctgtcgtcagctgctgtgtagaactggtctg
actggtcgctgttactgggaggtcgagtggagcggagaaatttatgtatcagtgagttac
agaggaatcaagaggaaaggaattttttatgactgttggtttggatacaatcatcagtcc
tggagtctgatctgctctgctgaaggttactctgtccgtcacaataacacagaaacacgc
atcacctcctcctccttcttctcttccttgtcctcctcctctggtagagtagcagtgtat
gtggactgtcctgctggctctctgaccttctacagagtctcctctgacacactgatccac
ctccacaccttcagcaccacattcactgaacctctttatcctgggtttgggtttgggttt
gctttcagcttgaggtctattgtcaggttctttttctctcctggttctgtccttggttcc
tcagtgtctctgtgtcctgctggtggagaaccttcctctctgctcaccacatatttcagt
ctgtacaactga
DBGET
integrated database retrieval system
