Pungitius pungitius (ninespine stickleback): 119195455
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Entry
119195455 CDS
T07626
Symbol
arih1
Name
(RefSeq) E3 ubiquitin-protein ligase arih1 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119195455 (arih1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119195455 (arih1)
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
119195455 (arih1)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
119195455 (arih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
Rcat_RNF216
zf-C3HC4
zf-RING_2
zf-RING_14
zf-RING_5
zf-RING_UBOX
RING_XB3-XBAT31
UBA_ARIH2_N
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
119195455
NCBI-ProteinID:
XP_037306274
LinkDB
All DBs
Position
6:complement(16064433..16077834)
Genome browser
AA seq
536 aa
AA seq
DB search
MDSDEGYNYEYDDEEEECSEDSAEEEPEDDTLELGEVELVDPVVAGGERDECGETGGGGH
GPGEEEEEDYRFEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMERY
FDGNLDKLFSECHVINPSKKPRIRPPINTRSSAQDMPCQICYLNFPNSYFTGLECGHKFC
MQCWGDYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITDSKVKLKYQHLITNSFVE
CNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLRKWIKKCD
DDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYN
CNRYNEDDAKAARDAQEFNALLLQRSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQK
MEEMQQHNMSWIEVQFLKKAVDVLCQCRSTLMFTYVFAFYLKKNNQSIIFENNQADLENA
TEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggactcagacgagggttataactatgaatacgacgacgaagaggaggaatgtagcgag
gatagcgccgaagaggagcccgaggacgacaccctggagctgggagaggtggagttggtc
gatcccgttgtggccggtggagagcgagacgagtgcggggagactggtggaggtggtcac
ggtcctggcgaggaagaggaagaggactaccgcttcgaggttttgactgccgagcagatt
ctccagcatatggtggagtgtatcagggaggtcaacgaggtcatccagaatcctgcgaca
ataacgcgcatacttctcagtcacttcaactgggataaagaaaagctcatggaaaggtat
tttgatgggaatctggacaagcttttctctgagtgtcatgtcattaaccccagtaagaag
cctcgcatccgtcctccaatcaacactagatcgtcggcacaagacatgccatgtcagatc
tgctacctgaacttccccaactcttattttacaggcctggagtgtggacacaagttctgc
atgcagtgctggggagattacctgaccaccaaaatcatagaagaaggaatgggacagacc
atttcttgccctgcccatagttgtgacattttggtcgatgacaacacagtcatgcgcctc
ataacagattctaaagtgaagttgaagtaccagcatttaattacaaatagttttgtagag
tgcaatcgactgttaaagtggtgccctgcaccagactgccatcatgttgtcaaagtccag
tacccagatgccaagccagtgaggtgcaagtgtggccgtcagttctgcttcaactgtgga
gagaactggcatgaccccgtcaagtgtaagtggttgagaaaatggataaagaaatgtgat
gacgacagtgaaacttcaaactggattgcagcaaacactaaggagtgtccaaaatgccac
gtgaccattgaaaaagatggtggctgcaatcacatggtttgtcggaaccagaactgcaaa
gctgagttctgctgggtgtgtctgggtccatgggagccccacggctcagcctggtacaac
tgcaatcgctacaatgaagatgatgcgaaggcagccagagatgctcaagagttcaatgct
ttgttactgcagcgctccagggccgccctgcaaaggtacctgttctactgcaaccgctac
atgaaccacatgcagagcctgcgctttgagcacaagctctacgctcaggtcaagcagaaa
atggaggagatgcagcagcacaacatgtcctggatcgaggtgcagttcctgaagaaggcc
gtggatgtgctgtgccagtgccgctcaacactcatgttcacttatgtctttgccttctac
ctcaagaagaacaaccagtccattatttttgagaataaccaggcagacctggaaaatgcc
accgaggtactctctggctacctagagcgggatatctcccaggattccttgcaggacatc
aagcagaaagtacaagataagtacagatactgtgagagcaggcgaagagtgctgctacag
catgtgcatgaaggctatgagaaggacctgtgggagtacattgaagattga
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