Pungitius pungitius (ninespine stickleback): 119195528
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Entry
119195528 CDS
T07626
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03020
RNA polymerase
ppug04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119195528 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
119195528 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119195528 (polr3b)
Enzymes [BR:
ppug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119195528 (polr3b)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
119195528 (polr3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
119195528
NCBI-ProteinID:
XP_037306399
LinkDB
All DBs
Position
6:complement(583032..600931)
Genome browser
AA seq
1132 aa
AA seq
DB search
MEVLGAEFNDLTPQELAAPVNTVAEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPMEVSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLKHNTLSEDAPIAIIF
KGMGVESDQEIVQMIGTEEHVMASFAPSLEECQKAQIFTQTQALRYLGNKVRRQRMWGGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGGNKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNSELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFLVFL
NGNILGVIRDHRKLISTFRLMRRAGFITEFVSISTNLTDRCVYISSDGGRLCRPYIIVKR
GQPMVKNKHIEDLSQGYRTFEDFLHEGLVEYLDVNEENDCHIALYEHMISKDTTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQRPMVT
TKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALILNKASLDRGFGRCLVYKNAKCTLRR
YTNQTFDKVMGPMLDAATRKPIWRHNILDADGICSPGEKVENKQVLVNKSMPTVTQTPLE
GSTQPGQPQYRDVPISYKGSTDSYIEKVMISSNAEDAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDTGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDGRFHYG
TAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSRYND
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgctcggagcggagtttaacgacttgactcctcaggagctcgcggctcctgtc
aacactgtggcggaaaaatggaaactgttaccagcttttctaaaggtgaaaggactggtg
aaacagcacatcgactcgtttaactatttcatcaatgttgagataaagaaaataatgaaa
gcaaacgagaagatcacaagtgatgctgatccaatgtggtacctcaaatacctcaatatc
tacgttggcatgcctgatgtggaagaaagcttcaacgtaaccagaccagtatctcctcat
gagtgccgtctgagagacatgacctattcagcgcccatcacagtggacatagagtacact
cgtggcagtcagagaatcatccgcaatgcactgcccatcggaaggatgccgattatgctg
cggagctcaaactgtgttctaacgggaaagacgcccatggaggtttctaaactcaatgaa
tgtcctctggatccaggggggtattttattgtaaagggtcaggagaaagtgattctgatc
caggaacagctgtccaagaatcggatcattgtggagcaggacaggaagggagccgtggga
gcctcagtgaccagctccactcatgagaagaaaagcagaacaaatatgattgtcaaacaa
gggaggttctacctgaagcacaacacgctgtcagaagacgcccccatcgccatcattttc
aagggtatgggcgtagagagcgaccaggagatcgtgcagatgatcggtacagaggagcac
gtcatggccagcttcgcccccagcctggaggagtgccagaaggctcagatcttcactcag
actcaggccctgcgctacctcgggaataaagtgcgccgacagcgcatgtggggaggcccc
aagaagaccaagatggaggaggccagagagcttttagcatctcttatcctcacacatgtg
cctgtcaaagagtttaactttcgagcaaagtgcatttacctggctgttatggttcggagg
gtgatcctggctcaagggggcaacaaggtggacgacagagattactatggcaacaaacgt
cttgagttggctgggcagctcctgtctctgctgtttgaagacctgtttaagaagttcaac
tctgagctgaagaaaattgccgaccagatcatccccaagcagagagccgctcagtttgat
gtggtgaagcacatgcggcaggatcagatcaccaacggcatggtcaatgccatctccact
ggcaactggtctctgaagagattcaagatggaccgtcagggtgtcacccaggtcttgtct
cgtctctcttttatttcggctctcggcatgatgacgagaatctcctcgcagtttgagaag
accaggaaggtcagcgggccgcgctccctgcagccgtcccagtggggcatgctgtgcccg
tccgacacacctgagggagaggcttgtggtctagtgaagaacttggcgctgatgacccac
atcaccaccgacatggaggatggtcccatcatcaaactggccttcaacctgggagtagaa
gacgtcaacctgctgtgtggagaggagctctcctatccaagcgtcttcctcgtcttcctc
aacggtaacattctcggtgtgattcgggaccatcgcaagctcatcagcaccttcagactg
atgcgcagggcaggttttatcacagagtttgtgtcaatctccaccaacttgaccgaccgc
tgcgtctacatctcttctgatgggggacgtctgtgcaggccgtacatcatagtgaagagg
ggacaacccatggtgaaaaacaaacacattgaagacctgtcacagggctacagaaccttt
gaagactttctgcacgagggcctggtggagtatctggacgtcaacgaggagaatgactgt
cacattgccctctatgaacacatgattagcaaagacacaacacatttggagattgagccc
ttcacgttgctcggggtgtgcgccggcctcattccttaccctcaccacaaccagtcaccc
aggaacacttaccagtgtgctatgggcaagcaggccatgggtactattggctacaaccag
aggaaccgcatcgacactctgatgtacctgctggcgtaccctcagaggcccatggtcaca
accaaaaccatcgagctgatcgactttgagaagctgcctgctggtcagaacgccactgtg
gccgtgatgagctacagcggctacgacattgaggacgctctaatcctcaacaaagcctcg
ctggacagaggatttggccggtgcctcgtctataaaaacgctaagtgcaccctgcggcgt
tacaccaaccagacctttgacaaggtgatggggcccatgctggatgctgcaacgcggaag
ccaatctggaggcacaacatcctggacgctgatggcatctgttcccccggtgagaaagtg
gagaacaagcaggtgttggtgaacaagtccatgccaactgtcacccagacaccactggag
ggcagtacccagccaggccagccccagtacagagatgtgcccatcagctacaagggctcg
acagactcgtacatcgagaaggttatgatttcatccaacgctgaagatgctttcctcatc
aagatcctcctcaggcagaccaggaggccagagattggagacaaattcagcagtcgccac
ggacagaaaggtgtttgtggcctcatagtgccgcaggaggacatgccgttctgtgacacg
ggcatctgtcccgacatcatcatgaaccctcatggatatccctccagaatgacggtgggg
aagttgattgagctgctggccgggaaggccggagtcctggacggccggtttcactacggc
acggcgttcggaggcagcaaggtgaaggatgtgtgcgaggatctcatccgctatggatac
aactaccagggcaaagactacgtcacctcaggaatcactggggaacctctggaggcttac
atctacttcggacccgtctattatcagaagttgaagcacatggtgcttgacaaaatgcac
gccagagcccgaggccccagagccgttctcaccaggcagcccacggagggccgctccaga
gacggaggcctgcgtctgggtgagatggagcgcgactgtctgatcggctacggagcgagc
atgttgcttctggagcgcctcatgatctccagcgacgccttcgaggtggacgtgtgcgga
caatgcggccttctgggatactccggctggtgtcactactgtaagtcctcgtgccacgtt
tcctctctgcgaatcccgtacgcctgcaagctgctgttccaggagctgcagtccatgaac
atcatcccccgactcaaactgtcgcgctacaacgactga
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