Pungitius pungitius (ninespine stickleback): 119195529
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Entry
119195529 CDS
T07626
Symbol
ppfibp1b
Name
(RefSeq) liprin-beta-1b isoform X1
KO
K27096
liprin-beta
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119195529 (ppfibp1b)
Membrane trafficking [BR:
ppug04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119195529 (ppfibp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
PUMA_CC
COG3_N
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
119195529
NCBI-ProteinID:
XP_037306400
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All DBs
Position
6:complement(604482..621896)
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AA seq
955 aa
AA seq
DB search
MMADASDMLAAALEQMDGIIAGSKALDYSNGMYDCQSPTSPFMGSLRALHLLEDLRSVLE
LMDTEERESLRCQIPDSTADSLVEWLHGHLSNGHMSLSGSDHYQERLSRIECDKESLVLQ
VSVLTDQVEAQGEKIRDLDSCLDEHRDKLNATEEMLQQEILCRTTLETQKLELISEVSNL
RLKQNTMEKDTLDFDDRFRDSEDLILEINELRYRLSELESEKLQYEKKLKSTKEELATMR
WQLEGKDGEMRRLQEETGFKAMASSSSDPTERVSHPDETLRKRLKEKHVEVQRMKKAVES
LMAANEEKDRKIDELKQSLLRYKKVQEMVMSVQGKKEKNKDTEHMGSNGDESIAFFSNMP
VFTESEKYDVTDVDQLKSRSPDELEILNGLNDEPSPTPSPSDPEGVSEAAPDVESCQEAA
QTGSHEHLERSNNKNASAETGAKPPTGPSASTEDESFGSRKARSSFGKGFFKLRGGKKTT
STPNLDRSRSASAPLLAEMERQGTDHLDLAGLPQRSANSDSTNTLSTTPESRKKSKGIKK
LFGKLKRSQSTTFNLDDNLPEGDFRRGGVRATAGPRLGWSRDLKTANNDVDAPFARWSKD
QVCDWLQGQGLGLHVNMARGWISSGQTLLQASQQDLERELGIKHPLHRKKLQLALQALGS
EEEDNKGKLDYHWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDDLLSLKVGSVLHHL
SIKRAIQVLRLNNYEPNCLRRRPSDENNISPAEISQWTNHRVMEWLRSADLAEYAPNLRG
SGVHGGLMVLEPRFNVETMALLLNIPPNKTLLRRHLGTHFNLLIGLEAQQLKQECLENPD
YTLLTATTKVKPRKLSFGNFGSLRRKKQDETEEYVCPMDVEMPKGRSFQKGFELQIYEDD
LDRLEQMEDSEGTVRQIGAFSEGIQNLTSMLKDDEFFNEASNSPNPSVTDEDSNA
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgatgccagcgacatgttggcagccgccttggagcagatggatggcattata
gcaggctccaaggctctggactattccaatgggatgtacgactgtcagtcccccacctct
cctttcatgggcagcctgcgggcgctgcaccttctggaagaccttcggagcgtcctggag
ttgatggacacggaggaacgggagagtctgcgctgccagatccctgactcaacagctgac
agtctggtcgagtggctccatggtcacttgtccaacgggcacatgtctctgagcggctct
gaccactaccaggagaggctttcccgaatagagtgtgataaggagtcactggttctgcag
gtgagcgtgctgacggaccaggtggaggctcagggagaaaagattcgagacctggactcg
tgcttggatgagcacagggacaaacttaacgccactgaggagatgctacaacaggagatt
ctgtgcagaactacactggagacccagaagctagaactgatctccgaagtgtccaacctg
aggctgaagcagaataccatggagaaggacacacttgatttcgatgatagatttagagat
agtgaggatttgattcttgaaatcaatgaactgcggtacagattgagcgagctggagagt
gaaaaactacagtatgaaaagaaacttaaatccacaaaggaggagctggccacgatgagg
tggcagctggagggcaaagacggagagatgaggagactacaggaagagacgggcttcaaa
gccatggcctcgagcagttcagatcccacggagagagtctctcatccagatgaaactctt
agaaagaggctgaaagaaaaacatgtggaagtgcagagaatgaaaaaggccgttgagtcg
ttgatggcagccaatgaagaaaaggatcgtaagattgatgaacttaagcagtcgctgctg
cgttataagaaagttcaagagatggtgatgtcagtgcaagggaagaaagagaaaaacaaa
gatactgaacacatgggcagtaatggtgatgagtccattgcattcttctcaaacatgcct
gtgttcacggagtcagaaaagtatgacgttacagatgtggatcaactgaagagtaggagc
ccagatgagttggagatcctcaatggactgaatgacgagccttcccccacaccgagccct
tcagacccagaaggagtatcggaggcagcgccagatgtagaaagctgccaggaagctgca
cagactggcagccacgagcatctggagaggagcaacaataagaatgccagtgcagagact
ggtgcaaagccgcccacgggtccctccgccagcacagaggatgaaagctttggttcgaga
aaggctcgttcatcctttggaaagggcttcttcaagctccgtgggggaaagaaaacaacc
agtacccctaacctcgaccgcagccggagtgcaagtgcgcctttgctagctgaaatggag
cgccagggcaccgaccatctggatctggccgggctgccacagaggtcggctaacagcgac
agcaccaacacactgtctacgactccagagagcaggaagaaatcaaaggggataaagaaa
ctctttgggaagctaaaaaggagtcagtctaccacatttaacctggatgacaacctacca
gaaggtgacttcaggagaggcggagttcgagccacagcaggacccagattgggttggtct
cgtgacctcaaaacagcaaacaacgatgtcgatgctccctttgcacgctggtccaaggac
caggtgtgtgactggctgcaggggcagggcctgggccttcatgtcaacatggctcgggga
tggatctcctctgggcagacgctgctgcaggcctcacagcaggacctggagagggagctg
ggcatcaaacacccgttgcacagaaagaagctgcagctggctctgcaggccctgggctca
gaggaggaggacaataagggaaagctggactaccactgggtgacgagatggctggatgac
attggtttgcctcagtacaagacccaatttgatgaggggagggtggatggtcgcatgctg
cactacatgacagtggatgacctgctctctctgaaagtggggagcgtcctgcatcacctc
agcatcaagagagccatccaagtgctccgactcaacaactatgagcccaactgcttgcgt
cgtaggccgtctgacgagaacaatatttctccagcggagatttcccagtggaccaaccac
agggtgatggagtggctgcggtctgcagacctggccgaatacgctcccaacctgagaggc
agcggcgtgcacggcggcctgatggttctggagccacggttcaacgtggagaccatggct
ttgctgctgaacatcccccccaacaagacgttgctgcgccgtcacctgggcacacatttc
aacctgctcattggcttagaggcccagcagctcaaacaggagtgtctagaaaacccggac
tacactctgctgacggccaccactaaggtcaagccaagaaaactatcatttggtaacttc
ggcagtctgaggagaaaaaagcaggatgagacggaggagtatgtgtgtccgatggatgtg
gagatgccgaagggacgaagctttcagaaaggctttgaactccaaatctacgaggatgac
cttgacagactagagcagatggaggactctgaaggaactgtgagacagatcggagcgttc
tctgagggcattcaaaacctcacgagcatgctgaaagatgatgaattcttcaatgaggct
tcaaattcaccaaaccccagtgtaacggacgaggactccaacgcatga
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