Pungitius pungitius (ninespine stickleback): 119195592
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Entry
119195592 CDS
T07626
Symbol
zgc:173742
Name
(RefSeq) DNA topoisomerase I, mitochondrial isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppug03032
]
119195592 (zgc:173742)
Enzymes [BR:
ppug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
119195592 (zgc:173742)
DNA replication proteins [BR:
ppug03032
]
Eukaryotic type
DNA Topoisomerases
119195592 (zgc:173742)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
SesA
Motif
Other DBs
NCBI-GeneID:
119195592
NCBI-ProteinID:
XP_037306527
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Position
6:complement(4125246..4147468)
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AA seq
735 aa
AA seq
DB search
MGREKAKENGKAKLNAKTLKKRRAKANPVSIENGTRNTAMSTKATPKPERRKPQKKVKTP
KTETLESAISCGESEQIEEDEDFVVEKQGIKRKRVKEEPTDGPSHSTASPSSKKKSAKEE
NEENKLNGGEKKEEEEELIMKRKRARMPKKASEEARLLKIKKKEEEEQSRWRWWEEEKYE
DGVKWKFLEHNGPYFPPDYRPLPDNVHFLYDGKEVKLSLAAEEVAFFFGQMLDHEYTTKK
VFQDNYFKDWRREMTHEERLLITDLDKCDFREIHAMHKAKVEARKNFTKEEKLALKEANQ
KILDEYGYCLLDNHKERIGNFKIEPPGLFRGRGEHPKQGMLKKRIQPEDVIINCSRESRV
PVPPAGHSWKEVRHDNSVTWLASWTENVQGAIKYIMLNANSKLKAEKDWEKYEIARKLKL
CVEDIRNQYNQDFKSKEMVTRQRAVALYFIDKLALRAGNEKDEGETADTVGCCSLRMEHI
TLHENLEGNKYVVEFDFLGKDCIRYYNKVPVIKKVFKNLNVFLENKNPKDDLFDLLNTGM
LNKHLSSLMTGLTAKVFRTYNASITLQQQLKELTNKSANEFEKLLSYNRANRAVAILCNH
QRAPPKTFDQSMANLQAKIDGAKENLALAKTTLKQAKKEAKTKGISNAKLQILVESKKAA
VKRSEEKLLKLELQAMDKEENKQIALGTSKLNYLDPRISVAWCKNMGVKIEKIYNKSQRD
KFAWAINMTEDDFEF
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgggaagagagaaggctaaagaaaacgggaaggccaagctcaacgcgaagacgctgaaa
aagcgcagagccaaagcaaaccccgtttccattgagaatgggaccaggaacactgccatg
tcaactaaagctacaccgaaacctgaaagacgaaagccgcagaaaaaggtcaagacaccc
aagactgaaaccctggagtcagccatcagttgcggtgagtcggaacagatcgaagaggat
gaggacttcgtggtagaaaagcaaggaataaaaaggaaaagagtaaaggaagagcccaca
gacggcccttcacactccactgcttcaccttcgtcaaagaagaaaagtgcaaaagaggaa
aatgaggaaaataagttgaatggaggagaaaagaaggaagaggaagaagagcttataatg
aagagaaagcgcgcaaggatgccaaaaaaggcttctgaggaggcaagactgctgaagatc
aaaaagaaggaagaggaggagcagagtcgatggagatggtgggaggaggagaagtatgaa
gatggggtgaaatggaagtttctggaacacaatggaccctatttccctcccgactaccgg
cctctgccagacaacgttcacttcctctatgatggtaaggaggtgaagctgagcctcgcc
gctgaagaggtggcgtttttctttggccagatgttggaccatgagtacaccaccaagaag
gtgttccaggataactactttaaagattggaggagggaaatgacccacgaggagaggttg
ctgattacagatctggacaaatgtgactttagggagatccatgccatgcacaaagccaag
gtggaggccaggaaaaacttcaccaaagaggagaaactggccttgaaagaggccaaccag
aagattttggatgaatatggctactgtctgctggacaaccacaaagagcgcattggcaac
ttcaagattgagcctccggggctgttccggggtcgcggcgagcatcccaagcagggaatg
ctgaagaaaaggatccaaccagaggacgtcatcatcaactgcagcagagaatccagagtt
cccgtgccgcctgctggtcacagctggaaggaggttcgccatgacaactctgtgacatgg
ctggcaagctggactgagaacgtccagggtgccattaaatacatcatgctgaacgccaac
tccaaactcaaggcagagaaggactgggagaaatacgagattgcccggaagctgaagttg
tgtgtagaagacatccgtaaccagtacaaccaggatttcaaatcgaaagagatggtcaca
cgacaaagagccgtggccctctacttcatagacaagctggcactgagagctggtaatgag
aaggatgagggagagacggcagacacagtcggttgctgctcgctacgcatggagcacatc
acccttcatgagaacctggaaggcaacaaatatgtggtggagtttgacttcctgggtaaa
gattgcatccgttactacaacaaggttccggtcatcaagaaggtttttaagaatcttaat
gtgttcctggagaacaaaaatcccaaagatgacctctttgacctcctcaatactggcatg
ctgaacaagcacctgagctctctaatgaccggtctgaccgccaaggtcttcaggacgtac
aacgcttccatcaccctacagcagcagctcaaagagctgacaaacaagtcagccaacgag
tttgagaagctgctgtcctacaacagggcgaacagagcagttgccattctatgtaaccac
cagcgggcgccgccaaagaccttcgaccagtctatggctaaccttcaggccaagattgat
ggtgcaaaggaaaatctggccctcgcaaagacgacgctcaaacaggccaagaaggaggcg
aagaccaaagggatctccaacgccaagctgcagattctggtggagagcaagaaggcagcg
gtgaagcgctcagaggagaagctgctgaagctggagctccaggcgatggacaaagaggaa
aacaaacagattgcacttggaacctcaaagctcaactacctggacccgcgcataagcgtg
gcctggtgcaagaacatgggggtaaaaatagaaaaaatctacaataagagccaaagggac
aaatttgcctgggccatcaacatgacggaggatgactttgagttctaa
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