Pungitius pungitius (ninespine stickleback): 119195647
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Entry
119195647 CDS
T07626
Symbol
nlrc5
Name
(RefSeq) NLR family, CARD domain containing 5
KO
K22615
NLR family CARD domain containing 5
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ppug04054
]
119195647 (nlrc5)
Pattern recognition receptors [BR:
ppug04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
119195647 (nlrc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
LRR_4
Atypical_Card
LRR_NXF1-5
LRR_8
AAA_30
AAA_22
ABC_tran
NOD2_WH
AAA_16
AAA_25
Motif
Other DBs
NCBI-GeneID:
119195647
NCBI-ProteinID:
XP_037306650
LinkDB
All DBs
Position
6:complement(5777827..5808395)
Genome browser
AA seq
1927 aa
AA seq
DB search
MDEGVDPDSENVNSVLAQESLELLNILSGQSPTVIMELCQMMPSDAGCNINQSSSNPSSA
AVTEHIKALLEYFRVANSADCRTFLQSMCLLCDNIPMHLESRLMSAAGYENSVFEQSNQN
VMGGKSSPPSEQLIKRPRIDYWMQYIAVVTHSLQRRWERVSEQLVSEVQLENVWVSLRTA
NRARDRPDQTPGPADKGARTPEPDWDYGSMDSRVTLENFLQGCTGKVTVLVGPAGSGKTL
LMSCLGKQWAHGLGPIPSSCLFVLLEFRQLNVLSRPLSLSELLLRHYVPVKESDHEKEAI
VHYLLSNPEQSCWVLDGYDEFHSKITKQDVQIELLDPEKPLPVADLISGLLNRQLLPGCT
LMVTCRVRDVLDLEGISDKVGQLLGWDCQEIKEYVDNYFGRKGHSANRAHGVKAAELLVS
NRHLLAMSSLPALCNISCICLEYLLLESRDPRRTPIPKERESETRLQAGEIEEKEPQIQE
RKIGKEDTEGGGYVQREDQGRKNEGILMDGTINRPPPPLPQGQIPSTLTQVYLTVLSAFL
SRDPGTRGNSDSLNNMKLPQSILRQHRSELGELSQLAWNSLEESKILFMKEDMPQDVLEF
SIRKGLFSQVELRCEDGTLVNSYCFTHLTLQEFLAALRIMTSDDVSDTQLKKRFSLRTRW
MTKSDQRTVFTDSLHLFVCGLASPNCTPALVQLARTTGGTGGQIWVKKRQTLVLNLLTKL
CQSNNLTGPKILELCHCVQESQDNQLAKQVVGARPTLELRNIRLLPNDIDAVAFVVNSVG
DNGIGLDFRACSMETECLDALPRCQHIHYLSFCSRKYGDKFAEKLSSILPEFKSLRKLEF
CGASLTSTGAASLASALPSCPEVTEINLSDNNLKDEGIKHITEIFTKHPKLLLVKLGRNN
SSLEALNFLIGKMSFLNIQQIHADGMKELTVTISQKSDSLDSHKTQSEPTISLLNLKWSR
PDMQKIANSLARCPALSILKFSGGHLDVDTLRMLIEFLPKFKITDKIIVNDSGLTVEGLV
SLTALLSDCPTVVELRIRLQSPAQVSIVFSGGRKNTKEISKVLCLRCCGLLPTHLERVGR
SLGTCPDLTFLDLSSNCLGNKGLRKLLDILPHLSGIQEINASNNRIGKERIVMLAGALCS
QNNLTEIHTSDGDGEQVILKFCPDERDEKHQKKMFRINNSSLLPSDMTTLCKRLVQCHCY
LELDLSHCSLTDKAIENLLKVLPKMTSLQRLNVSHSITSTTGALVLLRCLAVSQRVTSVE
LRAQAESFIKFDSVKAKETRCRLTHCSLQGDNLERLLEILQRGPQLSDLDLSSNQLEEEG
VKKFVDRLQKLKVTGYVNLSNNGLTQNGLLDVANTLCTCNNVSGVEISLNAEDRCVIWFT
PYEDCERTLSVTDSGLGRDHLVKLAEIISVTPSPTKLEFKNNLLQLDWIEEFLKLLNSSQ
RGFSVSIDERWIRSEEAVSLLCRCLHLSSNIHSIRVHHTTLHLSLMESTEVTSVSDDSAD
MTPLMAIKKIGLIDCAVEGHHLASMKSSIQRCPLLTELDFSHNSLGIEGAEFLCSVLPSL
PNLTSLSIGSKEASVVVVEKLSEALLQATAIECLNLSGHAVSDTAAKIVTRMLPRLRSLN
LSHCTWSACGGLQLIQTLGECVRLEDLCLDCLQLNEEIRMSLAQALRKINSIRSLRLNKI
ATAMGPSNSVLDLLAAMEGLTRIQDIELKGWRMADRGIEELTRLLPVWTELRKISLSKNL
ISDQLGELLLEALNSCTHLEELHLPSNSLGDVTAARMALVLPSLTNITVLDISENKIGYE
GSVSLSKAIMCMKKLTKIYLTAVGTSELCPVAASLAHCPLLQDVGLGWNNCGDKVALELV
RVMPLCQKLTRIDLESNAMTVSGAESLVKALQSCPALRIIRLWRNNVSLIEAQRLRQKER
RLNFSST
NT seq
5784 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaggcgttgatcctgatagtgaaaatgtgaactctgtattggctcaggaatca
ttggaactgctcaacatccttagtggtcaatcacccacagtcatcatggaactgtgccag
atgatgccaagtgatgctggttgcaacatcaaccagtcgtcctctaacccctcttcagca
gcagtaacagaacacattaaagccctgttggagtacttccgggtggccaactctgcggat
tgccgcactttccttcagagcatgtgtctcctctgtgacaacatccccatgcacctggag
tcaaggctcatgtcagctgctggatatgaaaatagtgtttttgaacaatccaatcagaat
gtcatgggtgggaagtcttcgccaccttcggagcagctcatcaaacgcccacggattgat
tactggatgcagtacattgctgtagtgacacattcgctgcagaggaggtgggagcgagtc
agcgagcagctggtgagtgaggtccagctggagaatgtgtgggttagcctaagaacggct
aacagagccagggatagacctgatcaaacccctggaccagcggacaaaggtgccagaaca
ccagagcctgattgggattatgggtctatggattcccgagttacattggagaacttcctc
cagggatgtacagggaaggtgacagttcttgttggcccggctggatcaggaaaaactctg
ctgatgtcgtgcttaggaaaacagtgggcacatggactaggccctattccttcatcttgc
ctgtttgtcctgctggagtttcgtcagctcaacgtgctgtcccgccctctctccctgtct
gagctgctgcttcgacactacgtccctgtgaaagagagtgaccacgaaaaggaagccatt
gtgcattacctcctctccaatccagaacagagctgttgggtgctggatggctatgacgaa
tttcacagcaaaatcactaaacaagatgtgcagatagagcttttggacccagaaaaacct
ttgcctgtagcagacctcatatctggcctgttaaatcgtcaacttctcccaggatgtact
ttgatggtcacctgtcgtgtacgtgatgtactcgatttggaaggcatatcagataaagtt
gggcagctgctgggttgggactgtcaggagatcaaagagtatgtggataactattttgga
agaaaaggtcactcagcaaacagagctcatggggtgaaggcagcagaactccttgtttca
aatcggcacctactcgccatgtcatccctccctgctctctgcaacatcagctgcatctgt
ctggagtatttactactggaaagtagagatccaagaaggacgccgatacctaaagaaaga
gaaagtgagacgaggctacaagccggagaaattgaagaaaaagaaccacagattcaagaa
cgaaaaattggaaaagaagacactgaaggagggggttacgtgcaaagagaagatcaaggc
agaaaaaatgaaggaatactgatggatggaacaatcaatagacctccgccacctcttcca
caaggccaaataccctccaccctcacccaggtctacctaactgttctcagtgcctttctg
agccgtgaccccggtacaagaggaaacagtgactcgctcaataacatgaaacttccacaa
agcattctgaggcagcatcgatcggagttgggtgagctcagtcagctggcctggaacagc
ttagaggaaagcaagatcctcttcatgaaagaagacatgcctcaggatgttttagagttt
tcaatcaggaaagggctcttctcacaggtggagctcagatgtgaggatgggacccttgtc
aactcctactgcttcactcatctaactttacaggagtttttggctgcactcagaatcatg
acgagtgatgatgtcagtgacacacagcttaagaagagattcagtctgagaactcgctgg
atgaccaagtctgaccagaggacagtcttcactgactccctgcacctgtttgtatgtgga
ctggcctctccgaactgcactccagccttagttcaattagccaggaccactggtggaaca
ggagggcaaatttgggtaaaaaaaagacaaactctggttttgaacctgctaacaaaactt
tgtcaaagcaacaatctgacaggaccaaagatattggagctttgccactgtgttcaggag
agccaggacaaccaactagctaagcaggttgttggtgcgcgacccaccttggaactgcgc
aacatccggctactaccgaatgatattgatgctgtggcttttgtagttaactcagtaggt
gataatggcattggattggactttagagcatgctcaatggagacagagtgtttagatgcc
cttcctagatgtcagcacattcactacctcagtttttgcagccgcaagtatggcgacaag
tttgctgagaagttgtcctccattttgccagaattcaagtccctgaggaagctagagttt
tgtggtgccagtctgacttccacaggagcggcaagtttggcctctgctctaccgagttgt
ccagaagtcactgaaatcaacctgagtgacaacaatctgaaagacgaaggaatcaaacac
ataactgagatttttaccaaacacccaaaactgcttttagtgaagctgggtcgaaacaac
agctctttggaagcactcaactttctcatcgggaaaatgtctttcttgaacatccagcag
attcatgcagatgggatgaaggaattgacagtcactatctctcaaaagtcggacagtttg
gacagccataaaactcagtccgaaccaacaatcagcttgctgaacctaaaatggagcagg
cctgatatgcaaaaaattgcaaattcactggcacgttgcccagccttgtccattctgaag
ttttctggaggccacttggatgttgacactctgaggatgctgattgagttcttgcccaag
tttaaaatcaccgacaagatcattgtgaatgacagtggcttaacagtggagggtttggtg
agtctcactgctctgctgtctgattgtccaactgtggtggagcttcgtatcagattacag
agccctgctcaggtgtctatagtgttttctggagggagaaaaaacactaaggagatatcc
aaagtgctctgcctccgctgctgcggtctactgccgactcatctggagagagtggggagg
agtttgggtacctgccctgatctcactttcctggatctgtccagtaattgtttaggcaac
aaaggtctgaggaaactgttggacatcctgccccatctcagtggcatccaggaaataaat
gccagtaacaataggattggcaaggaaagaattgtgatgctggctggtgctttgtgctcc
caaaacaacttaacagaaattcacaccagtgatggagatggagagcaggtgatcctgaag
ttctgcccagatgaaagggatgaaaaacaccagaaaaagatgttcaggataaacaacagc
agcctcctaccatctgacatgaccaccctctgtaaaagattggtccagtgtcactgctat
ttggagttggatttatctcactgctcattgacggacaaggctattgagaacctgctgaag
gtcctgcccaagatgacgtcactgcagagactcaatgtcagccacagcatcacttccaca
acgggagccctggtgctgctccgatgtttggctgtcagtcagcgagtcacctcagtggag
ctcagggctcaagctgaatccttcattaagtttgacagtgtgaaggccaaagaaaccaga
tgcaggttaactcattgtagcttgcaaggtgacaacttggagagactccttgagatcctg
caacgaggtcctcaactgtctgacctggatttatcaagtaaccagctggaagaggaagga
gtgaagaagtttgtggatcgtctccaaaagcttaaagtcaccggctacgttaatttgagc
aacaacggcctgactcagaatgggcttttggatgtggccaacacactgtgcacctgtaac
aacgtctctggcgtagaaatcagtttgaacgcagaggacaggtgtgtaatctggttcaca
ccatatgaagattgtgagagaacgctgagtgtgacagatagtggtttgggacgtgaccat
ctggtcaaattagcagagatcatctccgtcactccaagtccaaccaaactagagtttaag
aacaatttgcttcagttggattggattgaagagtttctgaaactcttaaacagcagtcag
agaggatttagcgtgagtattgatgaacgttggatcagatccgaggaagccgttagtttg
ttgtgccgttgtcttcatctcagcagcaacatacactccatcagggttcaccacacgact
cttcatctgtctctgatggagtccactgaagtgacctcagtcagtgatgactctgcagat
atgactccattaatggccataaagaaaattggcctcatagactgcgcagtagagggacat
caccttgcatctatgaagagcagcatccagaggtgtcctttactgacagagctggatttt
tcccacaacagcctgggcatagaaggcgccgagttcctctgttctgtgcttccctcgctg
ccaaatctcacttctctcagcattggttccaaagaggcttctgtggttgtggttgagaag
ctgtcagaggccttgctgcaggctacagccattgagtgcttaaatctgtcaggtcatgcg
gttagtgacacggcagcaaagatcgtgaccagaatgttgcctcgcctaagatcactcaat
ctgtctcattgtacgtggtctgcgtgtggagggctgcagctcatccaaacactgggagaa
tgcgtcaggctggaggacctttgtctggactgcctgcagctgaatgaggagatcaggatg
tccctggcgcaggcactgaggaaaatcaactccatacgcagtctcagactaaataagatt
gccacagcaatgggaccatcaaacagtgtgctagatctcctagctgctatggagggactc
acacggatccaggatatagagttgaagggatggaggatggctgatagaggaatagaagag
ctgaccagactccttccggtctggacggagcttcgaaaaatcagtctttcaaagaacctc
atcagcgaccaattgggagaattgctactggaggctttaaacagctgtactcatctggaa
gagctccatctgcctagcaacagtcttggtgatgtcactgccgctaggatggcccttgtt
ctcccgtcactgacaaacatcactgtgcttgatatttcagaaaacaagattggatatgaa
ggatcagtgagtctgtccaaagcaataatgtgcatgaagaagctcaccaagatctatctg
accgctgttgggacgtcagagctgtgtccagtagctgccagtctggcccactgtcccctc
ctacaggatgtgggtctgggatggaataattgtggggacaaagtggccctggagctggtc
agagttatgcctctctgtcagaagctgacgagaatagatctggagtcaaacgccatgact
gtctctggagcggagtccttggttaaagccctacagtcgtgtcctgctctgcggatcatc
agattgtggaggaacaacgtctctcttattgaggcccagaggctcaggcagaaggaaagg
agactgaacttctcgtccacctaa
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