Pungitius pungitius (ninespine stickleback): 119195668
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Entry
119195668 CDS
T07626
Symbol
cntn1a
Name
(RefSeq) contactin-1a
KO
K06759
contactin 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04514
Cell adhesion molecule (CAM) interaction
ppug04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119195668 (cntn1a)
04517 IgSF CAM signaling
119195668 (cntn1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119195668 (cntn1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ppug00537
]
119195668 (cntn1a)
Cell adhesion molecules [BR:
ppug04515
]
Immunoglobulin superfamily
Contactins
119195668 (cntn1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ppug00537
]
Others
119195668 (cntn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
FN3_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Fn3_VIN3
C2-set_2
Ig_4
Big_3_4
Motif
Other DBs
NCBI-GeneID:
119195668
NCBI-ProteinID:
XP_062418828
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All DBs
Position
6:17897884..17913890
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AA seq
944 aa
AA seq
DB search
MLDNVEIDLDTQSSHYDLVGGNLVISSPIKTKHVGQYFCLATNIYGTVVSREASVQFGYL
DLFSSEERESVYVKEGQGAVLLCAPPPHYPDELSFRWILNEFPTFIPLDKRRFVSQITGN
LYISKVDSSDSGNYSCIASSQSISKSVFSNYIPLVPLAERPIRKYPADLKVKFPDTTALV
GQNLTLECFALGNPVPEIRWKKLEGRLPPNHEVRMAGANLHLYNVQFEDAGSYQCEAVNS
RGKDYHAARVSVEAFPKWEEHISSTEKDLGRDYTMSCTASGKPEPRIRWLKNGQPSHRKE
MRFSSLTFDDSGMYQCIAESHHGLIYANAELRVYACAPTFEHNPVKRVLAPKNGRVVIEC
RPKAAPKPLFSWSKDTELLHNSSRLYIWEDGSLEILNLTRADEGRYTCFAENDRGKANST
GSLLVTDSTKITLAPSNADVKVGENTTMQCAASHDPSLDITFIWSLEGRVIDLHEESRHY
ERTLNGSSNGELLIKDLHLKHAGRYTCTAQTPIDNVTASAHLVVRGPPGAPGGVRVVKKA
DKNVTLQWSRGADNHNPISKYTIQYRDSFSKDVWKNATTSPPDVEGNTENATVVGLFPWT
EYEFRVIASSTLGKGEPSSPSPREKTLEAYPMVAPSDVGGGGGTSRELTITWTPVQPQYY
YGPDFGYIVAFKPQDESQWMRVTVADPQAKRYVHKDSSIPPMTQYHVKVKAFNRKGEGPF
SLTATIYSAQDALSEAPGRVDGRALSATDAIVWWLPLSQSNIDGYQVKYWKNKEDSEGGA
QRVVVPGSENHTRLEGMKPDSHYLVEVRGYNSAGYGPPSEHLQVHTKRPPPSRAPKIIGK
KWKVRSLNIAWEQVKPLANESPIDGYKVLLRQQGHSTTTLYTTNKQYIDIPIHTDGNYVV
EVRAHSEGGDGAVAQINITSGSVASAMRLGALSLLLVASLCLNL
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgctggacaacgtggaaatcgacttggatacacaaagcagccactacgatttagtagga
ggcaacttggtcatcagcagccccattaaaaccaaacacgtgggacagtacttctgtctg
gctaccaacatctacggcacagtggtcagccgagaggcctcagtgcagtttggatacctc
gacctcttctcgtcggaggagagggagtcggtgtacgtcaaggaaggacagggggccgtg
ctgctctgcgctcccccgccacactacccagacgagctgtcattccgatggatcctcaat
gaatttcccaccttcatcccgctggacaagaggcgtttcgtctcccagataacgggcaac
ctctacatctccaaggtggactcctccgacagcggcaactactcctgcatcgcgtccagc
caatccatttccaagagcgtcttctccaactacatccccctcgtcccgctggccgaacgt
ccgatcaggaaataccctgccgacctcaaagtgaagttcccagataccacggctctggtc
gggcagaatctcaccttggaatgctttgctctggggaatcccgtacccgagatccgctgg
aagaagctggagggaagacttccacccaaccacgaggtgcggatggcgggtgctaatctg
cacctgtacaacgttcagtttgaagacgcgggcagctaccagtgtgaggcggtgaactcc
agggggaaggactaccacgctgcgcgcgtgtccgtagaagctttccccaagtgggaggag
cacatcagcagcacagagaaggacctgggcagagattacacgatgtcctgcacagccagc
ggcaaacccgagccacgcatccgctggctaaaaaatggacaaccgtctcaccggaaagag
atgaggttcagcagcctgacgtttgacgattcggggatgtaccagtgcatcgcagagagt
caccacgggctcatatatgccaacgcagagctgcgtgtttacgcctgtgcccccacgttt
gaacacaaccccgtgaagagagtgctggcacctaaaaacggccgggtggtgatcgaatgt
cgacccaaggccgctccgaagccgctcttctcctggagcaaggacaccgagctgctccac
aactccagcaggctgtacatctgggaggacgggagcctggagatcctcaacctgacgcgc
gcagacgagggcaggtacacctgcttcgccgagaacgaccggggcaaggccaacagcacc
ggctctctgttggtcacagattccacaaagatcaccttggcgccgtccaatgctgacgtc
aaagtgggtgagaacaccacgatgcagtgtgccgcgtcacatgacccctccctggacatc
accttcatctggtccctggagggccgagtcatcgacctgcacgaggagagtcgccactac
gaacgcaccctgaacggaagctcaaacggcgagctcctgattaaggacctccacctgaag
cacgccggacgctacacctgcactgcacagacgcccattgacaacgttaccgcctccgcc
cacctggttgtcaggggtccccccggtgccccaggtggggtgcgggtagtgaagaaagct
gacaagaatgtaacattgcagtggagccgcggagcagacaaccacaaccccatctccaaa
tataccatccagtaccgggactccttctcaaaggacgtctggaagaatgccactacatct
cccccagacgtcgaggggaacacagagaatgccacggtggtgggattgttcccctggacg
gaatacgagttcagagtgattgccagcagcactctgggcaaaggagagccgagcagcccg
tcgccgagggagaagaccctggaagcatatcccatggtggcgccctcggacgtcggtggc
ggtggaggaacgagcagagaactgaccatcacgtggacgcctgtgcagccacagtactac
tatggccccgattttggctacattgtggccttcaaaccacaagatgagtcccagtggatg
agggtgactgtagctgacccccaggccaagcgctacgtccacaaggactcgtccatccct
ccgatgacacagtatcacgtcaaagtcaaggccttcaacagaaaaggagaggggcccttc
agcctgacggccaccatttattcggctcaggacgctctatctgaagcccctggacgggtt
gacggaagagctctctccgccacggacgccatcgtgtggtggctgcctctttcacaaagc
aacatagacgggtaccaggtgaagtactggaagaataaggaagacagtgaagggggggcc
cagagggtggtcgttcccggcagcgagaaccacaccaggctggagggcatgaagcccgac
tcccactacctcgtcgaggtccgtggctacaactcggcgggctacgggccgcccagcgaa
cacctccaggtccacaccaagagaccccctccaagtcgagctcccaaaataatcggtaaa
aagtggaaggtccggtcattgaatatcgcctgggagcaggtaaaacctctcgctaacgag
tcgccaatagacggctacaaggtgctgttaaggcagcagggccactccaccaccactctg
tacaccaccaacaagcagtacatcgacattcccatccacaccgatggaaactacgtggtg
gaggtccgggcgcactccgagggcggagacggggctgtggcacaaatcaacatcacaagt
ggaagtgtcgcgtccgccatgcgtctcggcgcgctctccctgctcctcgtggcgtccctc
tgcctgaacctctga
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