Pungitius pungitius (ninespine stickleback): 119195675
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Entry
119195675 CDS
T07626
Symbol
utp4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119195675 (utp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppug03009
]
119195675 (utp4)
Ribosome biogenesis [BR:
ppug03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119195675 (utp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
PROPPIN
CPSF_A
Motif
Other DBs
NCBI-GeneID:
119195675
NCBI-ProteinID:
XP_037306702
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MGEFKVHRVRFFDYMPSAIRAMAFSTRTERLALARADGALEIFNFSDNYFQEKVLPGQDG
RAVEALCWVGPRLFSAGLNGEITEYDLENLRPRYTVEGYGGPIWTIGVNNQGTLLAVGCE
DGTVKMFEVLKERIQFQRNLERQKGRIISLSWHPSGTLIAAGMMDMIRIFDAETGHATHR
LLVDRGAAASKSKEVVVWSLAFLSNNTIISSDSAGKVQIWDGLKGTLIRTHLITKWDVLT
LSVSQDESSLVAGTSEGTVVQFQFISSTVDRQDKDWVRTRTFKNHSHDVRALAHTETAVV
SGGMDTQLVVRPLLDKVEKNTRESAMRKVSFPHRSLVCCAKKAGLLLFQFPDHLELWRLG
ESDGYGKPGGSLPVKRGPEKLIQLKRKGEDHICCSALSPCGGWLAYSTVTSFRLYRLQNG
SICISKVSKLPKDLRSAHQLCFSTDSSKLFASSSNSSVVLVSLNEPQCKYLGTLGANYGS
RQPVHLLSASDDGKWLATANTDCEVHVYNLDKLKLHCTVPVYGSCPTAMAIHPTTSHLVV
VHADQQIFEYSLVKKEYTEWSRRLQKQGLHPLWLERDTPITNVAFNPKNPAHIIVHDMFM
FCIIDQSLPLPEAKNVLYNQMTLRSLPEPDRVIHSHGFKISKDFQHLLCVSLLEDHSLVV
VERPLLDIISQLPAPVRQKKFAT
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagtttaaagtgcaccgagtccgcttcttcgactacatgccctcggccatcaga
gccatggcattcagcacgcgcacggaacggctcgcgctggcccgggctgacggtgctctg
gagatcttcaacttctctgacaactacttccaagaaaaggtcctcccgggtcaggacggc
agggctgtggaggctctgtgttgggtaggcccacgtctattcagtgctggattgaatgga
gagatcacagagtacgacctggagaacctgaggcccaggtatacagtggagggctatggg
ggacccatctggaccataggcgtcaacaaccagggaacactgttagcggtgggttgtgag
gatgggacagtgaagatgtttgaagtattgaaggagaggattcagtttcagagaaacctt
gaaaggcaaaaaggtcgcattatatctctctcctggcatccgtctggtacgctgattgct
gcgggcatgatggacatgatccgaatctttgatgctgagacgggccacgccacacacagg
ctgctggtggacagaggtgcagcagcatctaagagcaaagaggtggtggtttggagcctt
gccttcctttctaacaacaccatcattagcagtgactctgcaggaaaggtccagatctgg
gatgggctcaaaggaactctgatcagaactcacctgattaccaagtgggacgttctcact
ctttctgtttcccaggatgagagtagcctggtagctggaacgtcagagggcacagtcgtc
cagtttcagttcatctcctctactgtggaccggcaggataaagattgggtccgaacaagg
acctttaaaaaccactcacatgatgtcagggcactcgcccatactgaaactgctgtggtg
tctggaggtatggatacccagctggttgtgcgccccctgttggacaaggtggagaagaac
acgcgggagtcggccatgcgcaaagtgtcttttccacacagaagcctggtctgttgtgca
aagaaagccggactactgctcttccagttccctgatcatttagagctgtggagactaggg
gaaagtgatggatatggaaagcctggcggcagtcttcctgtgaagaggggaccagagaaa
ctgatccagctaaagaggaagggagaggatcacatctgctgcagtgctttgtctccttgc
ggtggctggctggcatactctactgtcaccagtttccgtctctacagactacagaatggc
agcatttgcatcagcaaggtatccaaactaccaaaggacctacgttctgcccaccagctg
tgcttctccaccgactcctccaaattgtttgcgtcctccagcaattcctccgtcgttctt
gtttcccttaatgagccgcagtgcaaatacctcggtaccctcggcgccaattacggctcc
agacagccggtccacctgctgtctgccagtgatgacggcaaatggctcgctacagctaac
accgactgtgaggtccatgtctacaacctcgacaagctcaagcttcattgcacagtcccc
gtgtacggctcgtgtcccactgccatggccatccaccctacaaccagccacctggtagtg
gtgcatgctgaccagcagatctttgagtactctctggtgaagaaggagtacacagaatgg
agtcgtaggctgcagaaacaaggactgcaccccttgtggctggagagggacactcccatc
accaacgtcgccttcaatcctaaaaatccagctcacatcattgtgcacgacatgtttatg
ttctgtatcatcgaccagagtctgcccctccctgaagctaagaatgtgctctacaatcaa
atgacactgaggagtctgcctgagccagatagggtcatacacagccatggctttaagata
agcaaagatttccagcacctcctgtgtgtgagtctgttggaggaccattctctggtagtg
gtggagcgccccctgctggacatcatttctcagctgcctgctcctgttcgccagaagaag
tttgccacatag
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