Pungitius pungitius (ninespine stickleback): 119195744
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Entry
119195744 CDS
T07626
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119195744 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119195744 (cnot2)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119195744 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119195744 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
119195744
NCBI-ProteinID:
XP_037306840
LinkDB
All DBs
Position
6:complement(3163538..3170612)
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AA seq
531 aa
AA seq
DB search
MFGARKKFVEFVEVVDNDFTDESMYYSQPSMFPHRSDKDSSNVFLQMLSSPSPSSSSGQL
SQLGASLYGPQSALGFSVRGIGNSTPQLNRNLTQGTQLPSHITPTTGVPTMSLHTPPSPS
RGTLPMNTRNMLNHSQVGQGIGMSGRTNSMGSSGLGSPNRSSPSIICMPKQQPARQPFTI
NSMSGFGMNRNQGFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRSRREGTGNPTPV
LNPLAGRAPYVGMVTKPSTEQTQDFSIHNEDFPALPGPNYKDPTLNNDDSKTNLNSTSKS
TSNADGPKFPGDKTTTAQNNNQKKGIQVLPDGRVTNIPSGMVTDQFGMIGLLTFIRAAET
DPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRD
KLAAIKLARYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTL
KTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctagaaagaaatttgtagagtttgtcgaggtagtcgataatgacttcact
gatgaaagcatgtactacagccagccgtcgatgttcccacatcggtcggacaaagattct
tcaaatgttttccttcagatgctgtcgtctccctcgccgtcgtcgtcgtcgggtcagctg
tcgcagcttggtgcaagtttgtacggcccacaaagtgcacttggcttctcggtaaggggc
atcgggaacagtacgcctcagttaaatcgaaatctaacacaaggcacgcagctaccaagt
catatcaccccaacaacgggggtccccaccatgtctctccatacccctccatcaccaagc
agggggacattgccgatgaacacgaggaacatgttgaaccactctcaggtcggtcaaggc
attggaatgagtggcaggaccaatagtatgggcagctcggggcttggcagccccaaccgc
agctcgcccagtatcatctgcatgcccaaacagcagccagcacgccagcccttcaccata
aacagcatgtcagggttcggtatgaatcgcaatcaggggtttgggatgaacaactcgtta
tcaagcaacatcttcaacggcacagatgggagtgaaaatgtaacgggactggatctgtca
gacttccctgcgttagcagacaggagtcggagagaagggactggaaacccaacaccggtg
ctcaacccactggctggacgggctccttatgttggcatggtgacaaagccgtcgactgaa
caaacacaggatttctctatccataacgaggactttcctgcactgcctgggccaaactac
aaggaccccacgttgaacaacgacgacagcaaaactaacttgaattccacaagcaagagc
acatccaatgcagatgggccaaagttccccggagacaagacgaccacagcacagaacaac
aaccagaagaaagggatccaggtgttgcccgatggtcgggtgacgaacatcccctcagga
atggtgacggaccaattcggcatgattggcctgctgacgtttatccgggcagcagagacc
gatccggggatggtacatctggcgctcggaagtgacctcacaacactgggactcaactta
aactcaccagaaaacctgtaccccaagtttgcctctccttgggcttcatcgccatgtcga
cctcaagacatcgacttccacgttccgtctgaatacttaaccaacatccacataagggac
aagctggctgcaattaaactggcacgatacggcgaagacctgttgttctacctgtactac
atgaatgggggagacctgctacagcttctggcggcagtagagcttttcaaccgggactgg
aggtaccataaagaagagcgggtttggataacgagggcgcccggcatggagcctacactg
aagaccaacacctacgagaggggaacctactacttttttgattgtctcaactggaggaaa
gtagccaaggaattccatctggagtatgataagcttgaagagaggcctcacgtgccaacg
acattcaactacaacccagcccagcaggccttctaa
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