Pungitius pungitius (ninespine stickleback): 119195787
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Entry
119195787 CDS
T07626
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
119195787 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119195787 (fan1)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
119195787 (fan1)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
119195787 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
SAP
Motif
Other DBs
NCBI-GeneID:
119195787
NCBI-ProteinID:
XP_037306935
LinkDB
All DBs
Position
6:14926415..14931786
Genome browser
AA seq
984 aa
AA seq
DB search
MTERTNKDKLTRSGPLSRSKKKDRVQATSSPITSFFNSRPPPKVACPLCGHFVPRFKINE
HIDLQCQNFERGDSSAASAGNSVAPSSQLSPSRNPPKPTKNQEALKETKTSPYFKKNNSE
QAPREAESTSGVRKNLGSLSSKLSSKCPTVPERTPTEDKHSLSSPEMKTYSSEALGSSQK
ENLQSLEDNKDCVTVIDLTETAVEDSSCSVEGPDLKRKASKLETVTKLPSSSSKLSKRKK
ETSAGKKEKKAKYEHSSGESHEVLSGESVAETPDADRLKAEAPSRTAWDGHLSSEDTCKR
GAAAAAAAAAAAINRDSQAESGHENAAGGETESSRPPQLPYYLRNFKSVLQAVLENDDDR
SLFNQEDLSLVQAFEKLSVMGQKLYVRLFQRKLKWLQVNKLDYEQISSDLAPVAEELVQG
GFLQAESDLQDLGEALDLLPAPELKTLAKTFHLGNSGTQKQQLVDGLLRLSRQKCLFSLT
PNIGPVILKRAKQLASSCVRLCRGPRAVFSRILLLFSLTDTMDEEEMAAGGQSQLFTILL
VNSGRLAFPDYTVQREAKVFQDRDDLIRYEASMRALQEVVSAMQGGQWEEAMELYAAAKK
IWQELRRNHDLSPQEELPVFLRSFTTGWAYTRILSRVVEILQRLRHYEEAVEELRGLLSQ
SVYCPDSRGRWWDRLALNLHQHLKKPEQAICAIREGLSDPLVRTGHKLSLHQRAVRMNES
ASMKKYRLQLKDLPAIQVQDVTHVTIRGQLFPHEGGTGKSKFLLPANEGDESAEATVICS
VEELSLAHYHQQGFDQGIHGEGSTFSTLFGLLLWDIIFMEGIPDVFRNSYQTCPLDLYTD
RFYENRKEAIDTRVRLLSESSVETLHDMLEDVWTSQEGKVCSLVSWERFASLQQAKSLVS
CLGGAFLGGIIRRMSKDYRHCRGGLPDLVVWNASNNSYKLVEVKGPTDRLSQKQQIWLDE
LKKLGADVEVCHVTATGARGARLE
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagagaaccaacaaggacaaactcacacgcagtgggccgttgtccaggagcaag
aagaaagaccgcgtccaagccacctcgtctccgatcacctcgttcttcaacagccggcct
ccgcctaaggtggcttgccccctctgtggccactttgtaccgaggttcaagatcaatgag
cacattgatttgcaatgtcagaactttgagaggggagacagtagtgccgcctcagcgggt
aatagtgttgcaccaagcagccagctgtcacccagcaggaatcccccaaaacccacaaag
aatcaagaggcgctcaaagagacgaagaccagcccgtatttcaaaaagaataactctgag
caggcaccacgggaggctgagagtacaagtggggtcaggaagaacttgggaagtctttcc
tccaagttatcttcaaaatgtcctacggtacctgagaggacacctacagaagacaaacat
tccctgtcgagtcctgaaatgaagacatattcttctgaggcgctcgggagctcacagaag
gaaaatcttcagagtttagaagacaacaaagattgtgtgacagttattgaccttacagaa
actgccgtggaagattcgtcatgttcagttgaaggacctgacctcaaaaggaaagcatct
aaattagagaccgtcacgaaattgccctcgtcttcttccaaactctcaaagagaaagaag
gaaacttccgctggcaagaaggaaaagaaagcaaagtatgagcacagcagcggggagtcg
catgaggtgttatcgggtgaaagcgtagcagagacgcctgatgcggaccggctaaaggcg
gaggcgccttctcgcaccgcctgggacggacatttgagttcagaggacacgtgcaagaga
ggtgcagcagcagcagcagcagcagcagcagcagctattaatcgtgattcgcaggccgag
tccggtcacgagaacgccgctggtggcgaaacggagagctctcggccgccccagcttccc
tactacctccgtaacttcaagagcgtactgcaagcggtgctggagaatgacgacgacagg
tcactgttcaaccaggaggatctgtcactcgtgcaggcatttgagaagctctcagtcatg
gggcagaagctgtatgtgagactatttcagcggaaactgaagtggctccaagtaaataaa
ctggattatgaacagatatccagtgatctggcgcctgttgctgaggagctggtccaaggc
ggtttcctgcaggcagagagtgaccttcaggatttgggggaggctctggatctcctgccg
gctcctgagctcaaaactctggctaagactttccatttgggcaattctgggactcagaag
cagcagctggtggacggactcctccgtctgagcaggcaaaagtgcctcttctctctgacc
cccaacatcgggcctgtcatcctcaaacgagcaaagcagctcgccagttcctgtgtgcgc
ctgtgtcgcggccctcgagccgtcttttctcgaatcctgctcctcttctccctgacggac
accatggatgaagaggagatggcggccggtgggcagagccagctcttcaccatcctgctg
gtcaactcgggacgcctggccttcccggactacacggtgcagcgtgaagccaaggtgttc
caggacagagacgatctcatcaggtacgaagcatcgatgcgagctctgcaagaagtagtc
tcagctatgcagggaggtcagtgggaagaagccatggagctttacgccgctgcgaaaaag
atctggcaggagttgaggagaaaccacgacctcagtccccaggaggagctgcctgtgttc
ctgcgcagcttcacgaccggctgggcttacacccggatcttatctagagtggtggagatc
ttgcaaaggctacgtcattacgaggaagcagtggaggagctgcggggtttactgtcgcag
tctgtttactgtcctgacagccgagggcgatggtgggacagactggcactaaaccttcac
cagcacctaaaaaaacctgagcaagctatttgtgctatcagagaagggctgtcggaccct
ctcgtgcgaactggacataaactttctctacaccagagagctgttaggatgaacgagtcc
gcgagcatgaagaagtatcgccttcaacttaaagacctgcccgctatccaagtccaagat
gtcacgcatgtgaccatccggggacagctgttcccccatgaggggggcacggggaaatcc
aagtttcttttaccagcaaatgaaggggacgagagtgccgaggccaccgtaatatgctcc
gtggaggagctgtctttagcacattaccaccaacaaggctttgaccaagggatccatgga
gagggctcaacgttctcaacattgtttggtcttctgctttgggacatcatttttatggag
ggcattccagatgttttcaggaattcttaccagacatgtcctctggatctttacactgac
cgtttctatgagaacagaaaagaagcaattgacactcgtgtgcggctgcttagtgagtcc
tcagtggagactctgcatgacatgttggaagatgtttggacctcccaggagggcaaagtg
tgttccctggtcagctgggagcgtttcgcatcacttcaacaggcaaagtctctcgtgtcc
tgcctgggtggagctttcttaggagggataataagacgaatgtccaaagactacagacac
tgccgcgggggtttgcctgatctggtggtgtggaacgcctcaaacaacagctacaagctg
gtagaggtgaaggggcccactgaccggctttcacagaaacagcaaatatggctggatgag
ctgaagaagctgggggcggacgtggaggtgtgtcacgtgacggcaactggagccagagga
gctcgtctggaatga
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integrated database retrieval system
