Pungitius pungitius (ninespine stickleback): 119195808
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Entry
119195808 CDS
T07626
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119195808
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Other basic domains
RF-X
119195808
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
WHD_Cdc6
Motif
Other DBs
NCBI-GeneID:
119195808
NCBI-ProteinID:
XP_062418832
LinkDB
All DBs
Position
6:14976230..14990033
Genome browser
AA seq
1492 aa
AA seq
DB search
MADDQQQPGPKPASGLGSLPALVPGLQGPEANALQFKIKNSICKSVQSKVDGILQDVEKF
TDIEKLYLYLKLPSGPSNGNDKRTENERGSSTPGLCDQSSMSSSRTQQMYAFNWIRNHLE
EHPETSLPKQEVYDEYKSYCDNLGYNPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCYS
GLRKKAFVHMPSLPNLDLQKSGDGCELMEPTGQSPSAEDEMRSAACGLVCEWAQKVLSRQ
FDHVEDLARFLLNSHYIGTKSMAALTVMTGTPTGMKTPTPASAFVPTAEANSFQPQVKTL
PSPSVDAKQQLQRKIQKKQQEQKLHSPLPSEAQVKRTEASTPGPTIPCGSPALLSPQPTI
GIVVAAVPSPVTVQRGRQLMTSPSPVGTSEGKVLPVNFQVVTQSLKQSPKHPQNISASPV
SDRLARHGTRYAQILPKPSATSAITLRSPPTLLITNSPIKTVMPTPHVSSVNVVKMTAIA
LAPSSSSGASVRPASAGVNTIASLDDSQHPHGGSSFAPQSPAIRPGPLVSTHILSSDIKV
VSEAGNDSTFAAGAKEGGMAKFRAASEPSFLIKCSPGPDRGSRTKSDPTPPPTSVAVAGT
LDSNSINCHGSTLYLTVDNQNAIGNTSSNGSSALTPTSKDPCLDAKSPRKRTGPGGEAHV
IPVKRVFISQQPLAFIDNPKPGVSAALKRIPRPGTPARPESAPCKATVKHNSTGPSQILA
LSDSPLTHNEGSQTVVKPQALLMKREDHSLGADARAAGNSTPDQGLLRQITRDSLTIPAN
SGAHDASVMRDLKSTIWEEGQLDELRKQAFAQQMPAEPKQAPSDQLSIIAQPAEASGQLS
LAQEMVDFAGSQPNMDYFPFNDDDMTQDSIVEELVQMEEQMKLKGLFGSCVDVSIQGQSA
TSQGSILNSHQAGSTFFHSAHSSTTPVQTPTPTPTPTPTPTPTSEMTLGHSMARESPCSR
MAPITPVDGAMGRHTPISTPLSNCGSSVPPSPVECRNPFAFTPINSSITGYHDASIVSSS
PVKPMQRPMATHPDKAKLEWINNRYNSNSAGPLPNHSIGLLPSYQDLVDDQFRKPHAFAI
PGQSFQAQSRQDAAHFGRLTPISPVQQQQLVTGVSTPTKQESFAVPAPLDNKASTSSASG
TFRCRSVSPAVRQRNPSGNNNPLTTTNTTNDNTTTTTTTTTPRAVVSPFNSPITSEVLSI
LSNSQTVSSMHSMVQRSQSVPLSIMMQSEMLPLQGQSNAKITNVLLSKMESDGDDSVRGL
GINNLASNYTARMNLTQILETTPGYAGGAAHQTQLPVCSSPAAFELQQHGYLTTGSGEQV
GFSAGDSQAQAGTGDQDQHHHQQQQQQQQQQLCENPVQTQPQLLLQSTQQPEAEDEQQQL
DFNNTVKDLLGDDGLNPSSQLVGQVASELNAVASDFSNDIRLTSDLSSSITDLNTLDTNL
LFDPNQQQEQYEDSTLEELKNDPLFQQICSDTVNSFDWLESKDQPTTVEMLG
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatcaacaacaaccgggtccgaagcctgcctcgggactaggctctcttcca
gccctggtgccggggctccaggggcccgaggccaacgcgctgcagttcaaaataaagaac
tcgatctgcaaatctgtacaatcaaaagtggacggcatattgcaagatgttgagaagttt
acagacatcgaaaaactctacctctacctgaagttgccttctggtcccagcaatggcaat
gataaaaggactgagaatgagcgggggtcctccactcctggattatgtgaccagagttcc
atgtcgtcaagccgcacgcaacagatgtatgcattcaactggatacggaatcacctagaa
gagcacccagagacctccctcccaaagcaagaggtgtatgatgaatacaagagctattgt
gacaatctcggctacaatccactgagtgcagcagactttggaaagatcatgaagaatgtt
tttcctaacatgaaagcacgtcgactgggcatgaggggaaaatccaaatactgttatagt
gggttaaggaagaaagcttttgttcacatgccgtccttacctaacctggatctgcagaaa
tctggtgatgggtgtgagctgatggagccgacgggccagtccccgagtgctgaagatgaa
atgagatctgccgcttgcggactggtgtgtgagtgggcccaaaaggtcctgagtcgtcag
tttgaccacgtggaggacctggcccgcttcctgctcaatagccactacattggtactaag
tccatggctgcgctcactgttatgaccggaacccccacaggaatgaagacgccaacccca
gcgtctgcgttcgtgcccaccgctgaggcgaactctttccagccccaggtgaagaccctg
ccttctccctcggttgatgcaaagcagcagctgcagcgcaagatccagaagaagcagcag
gagcagaagctccactcgccgctgcccagcgaggcccaggtcaagagaacggaggccagc
actcccggccccaccatcccctgtggcagccccgctctgctctcccctcagcccaccata
ggcatcgtggtagcagctgtccccagcccggtcacggtgcagcgaggccggcagctgatg
acctcacccagccccgtggggacttccgaagggaaagtgttgcccgtgaacttccaagtg
gtcactcagtccctgaaacagtcccccaaacatcctcagaatatctcagccagtcccgtg
agtgaccggctggcgcggcacggcacgcgctacgcacaaattctgcccaagccctctgcc
accagtgccatcacgctgcgctcgccccccaccctgctcatcaccaacagccccataaaa
actgtgatgccgactccccacgtcagctcggttaacgtggtgaagatgacggccatcgct
ctggctcccagcagcagcagcggcgccagcgtgcgccccgcctcggcgggcgtgaatacc
atcgcttctctggacgactctcagcacccgcacggcggcagctcctttgccccccagtct
cctgcaatcagaccgggtcccctggtctccacccacatcctgtcctccgacatcaaagtg
gtgtccgaagccggaaatgacagtaccttcgctgccggggccaaagagggaggaatggct
aagttccgggcggccagcgagccgagcttcctgattaagtgctctcccggacccgaccga
gggtcacggacgaaaagtgaccctacaccccctcccacctcggtagctgtagctgggacc
ctagacagcaatagcataaactgccatggcagcactttgtacttgactgttgataatcag
aacgccattggcaacacgtcatccaacggctcctccgctcttaccccgacatcgaaggac
ccctgcctcgatgccaagagcccgagaaagcgcacgggccccggtggggaggcccacgtc
attcctgtgaagagggtgttcatttcccagcagccactggcttttatcgataatcctaaa
cctggagtcagtgctgctctgaagcggatccctagaccgggaaccccagccaggccagag
agcgccccctgcaaagccactgtgaaacacaactccacggggccctcgcagatcctcgcc
ctctctgactcaccgctcacacacaacgagggctcgcagactgttgtcaaaccccaggcc
ctgctgatgaaacgcgaggatcactctctcggcgctgacgcaagagccgctggaaacagc
acgccagatcaggggttgctaaggcagatcaccagggactctctcaccataccagccaac
tcaggagcacacgacgcctctgtgatgagggacttaaagagcacaatatgggaggaggga
cagctcgacgagcttcggaagcaggcgtttgcgcagcagatgccagcagaacccaagcaa
gccccttctgaccaactttccatcatagctcaacccgccgaggcctcgggccagctgagc
ctcgcgcaggagatggttgactttgcaggttctcagcccaacatggactacttcccattc
aacgacgatgacatgacccaggacagcatcgtggaggagctggtgcaaatggaggagcag
atgaagctgaagggtctgttcgggagctgcgtggatgtgtccatacaaggccagtcggcc
accagtcaaggctccatcctgaattcccaccaggccggctctactttcttccactcggcc
cacagcagcaccactccggtgcaaactcccactccgacgccgactccgacgccgacgccc
acccccacctcggagatgacgcttggtcacagcatggcgagagagagcccctgttcccgc
atggctcccatcaccccggtggacggagccatgggtcgccacacgcccatcagcacgccg
ctgtccaactgcggcagcagcgttcccccgagcccggtggagtgcaggaaccccttcgcg
ttcacgccgatcaactcgagcatcacagggtatcacgatgccagcattgtctccagcagc
cccgttaagcccatgcagaggcccatggcaacgcaccccgacaaggccaagctggagtgg
atcaacaaccgctacaacagcaactcggcaggtcctttgccaaaccacagcattggcctc
ctgcccagctaccaagacctggtagatgaccagtttcgtaagccacatgcctttgcgatc
ccaggccagtcattccaggctcagtcgaggcaggatgccgctcactttggccgtttgacc
cccatatcgccggtgcagcagcagcagctggtaactggtgttagtacacccactaaacag
gagagttttgctgtgcctgcaccgttagacaacaaggcatcaacctcatctgcgtccggc
actttccgttgccgcagcgtgagtcccgcagtgcgccagaggaaccccagtggcaacaac
aaccctctaaccaccaccaacaccaccaacgacaataccaccaccaccaccaccaccacc
accccccgggctgtggtttccccctttaactcccccatcacctccgaggtgctcagcatc
ctgtccaacagtcagacggtgagctccatgcacagcatggtccagcggagccaatctgtg
cccctgagcatcatgatgcagagtgagatgctgcccctgcagggccagagcaacgccaaa
atcaccaacgtccttctcagcaagatggagtccgacggcgacgactctgtccgcggcctg
ggcataaacaacctcgcctccaactacacggcccgcatgaacctcacgcagatcctggag
accacgcctggctacgctggaggagccgctcaccagacccagctgccggtttgctccagc
ccggctgcctttgagctccagcagcacggctacctgaccacaggcagtggagaacaggtg
ggtttctccgctggggacagccaagcacaagcgggtactggtgaccaagaccaacatcat
catcagcagcagcagcagcagcagcagcagcagctctgtgagaatcccgtgcaaacgcaa
ccgcagctcctcctccagagcacacagcagccagaggcagaggacgagcaacaacagctg
gatttcaacaacactgtcaaggacctgctgggggacgacggcctcaatcccagttcccag
ttggtgggtcaggtagcttcggagctcaacgccgtggcgtctgacttttccaacgacatc
agactgacctccgatctgtccagtagcatcactgaccttaacacgttggacaccaacctg
ctgtttgatcccaatcagcagcaggaacaatacgaagactcaacactggaagagctgaag
aacgacccgctgtttcagcaaatatgcagtgatactgtgaactcctttgactggctagaa
agcaaagaccagcctactacagtagagatgctgggctga
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integrated database retrieval system
