Pungitius pungitius (ninespine stickleback): 119195853
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Entry
119195853 CDS
T07626
Symbol
phaf1
Name
(RefSeq) UPF0183 protein C16orf70 homolog isoform X1
KO
K27411
phagosome assembly factor 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119195853 (phaf1)
Membrane trafficking [BR:
ppug04131
]
Autophagy
Other autophagy associated proteins
Others
119195853 (phaf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAF1
Motif
Other DBs
NCBI-GeneID:
119195853
NCBI-ProteinID:
XP_037307050
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All DBs
Position
6:complement(4955542..4965904)
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AA seq
427 aa
AA seq
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MLDLEVVPERSLGNEQWEFALGMPLAQAIAILQKHCRIIKNVQVLYSEQTPLSHDLILNL
TQDGIKLLFDATNQRLKVIEVYDLSKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHPGVY
NAAEQLFHLNFRGLSFSFQLDSWNEAPKYEPNFAMGLASLQIPHGAMVKRMHIYTGNNLQ
ETRAPVMPLACFLGNIFAESVDVLRDAAGPLGLKLRLLTAGCGPGVMADSKVRSLERSIY
FGDSCQDVLGALGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDSA
TNLVKKFVLHTNYPGHYNFNIYHRCDFKIPLIIKKEGADAQTEDCLLTTNSKWDHIQELL
GHPMEKPVVLHRSSSANNTNPFGSTFCFGLQRMIFEVMQNNHIASVTLYGAHRTASQTRP
ESSSSSH
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgctggaccttgaggtggtgcctgagagatcactgggaaatgagcaatgggaattcgct
ttagggatgccattggcccaggccatcgctattctgcagaaacactgccgcatcatcaaa
aatgtccaggtgctttacagtgaacagacaccactcagccatgacctcatactgaacttg
actcaggatgggattaaactgctctttgacgccacaaatcagagactcaaggtgattgaa
gtgtacgacctgagcaaagtcaagttgaaatactgtggagtccatttcaactctcaggcc
attgcccccacaattgagcaaatcgaccagtcatttggagctacgcaccccggagtttac
aatgctgcagaacagttgttccatctcaactttcgaggcctgtccttttcctttcaactg
gactcatggaatgaagctccaaaatacgagcctaactttgccatgggtttggcctccctg
cagattccacatggggccatggtcaagaggatgcacatctacactggcaacaacctgcaa
gaaaccagggctcctgtgatgccgttggcttgtttcctggggaacatctttgcagaaagt
gttgatgtcctgagagatgctgcagggcctctggggcttaaactccgccttctcactgca
ggctgtggtccaggtgtgatggctgattcaaaagtgagatccctggaaaggagcatctac
tttggagattcgtgtcaagatgtactgggtgctctgggctcgccacataaagtcttctac
aagtccgaggacaagatgaagatccactctccgtcacctcacaagcaggtcccttcaaaa
tgtaacgactacttcttcaactacttcacccttggagtggatatcctgtttgattcagcg
actaacctggttaagaagtttgttctacataccaactaccccggccattacaacttcaac
atatatcatcgatgtgactttaagattccactcatcattaagaaagaaggagccgatgct
cagacggaggactgcctgttaacaaccaacagcaagtgggatcacattcaggaactgctc
ggtcacccgatggagaaacctgtcgtgctccacaggtcctcgtcagccaataacaccaac
ccgttcggctctacgttctgctttggactgcagaggatgatctttgaggtgatgcagaat
aaccacatagcatcagtgaccctttatggtgctcatcggaccgcaagtcaaacccgaccc
gagtccagcagtagttcccactga
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