KEGG   Pungitius pungitius (ninespine stickleback): 119195922
Entry
119195922         CDS       T07626                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    119195922
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ppug01009]
    119195922
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppug03021]
    119195922
Protein phosphatases and associated proteins [BR:ppug01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     119195922
Transcription machinery [BR:ppug03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     119195922
    Little elongation complex (LEC)
     119195922
SSDB
Motif
Pfam: ELL Occludin_ELL DUF4028
Other DBs
NCBI-GeneID: 119195922
NCBI-ProteinID: XP_037307142
LinkDB
Position
6:12337457..12364345
AA seq 599 aa
MAALRQEHRYGLSCGQINKNNPNQTLFHVKLTDTAIRTLEAYQNLKASLSNQPAICFKGS
QGYVKIPAPTPESPDEFRVFSFYLSSDSKDKPQSSFDCIHQYVSGEGRDHLEGQGSIQDK
ITVCATDDSYQATRERMSQVEKDIWSRSAIEIKPGPSKCVKVQRKQGLVSGSDSNNKHSP
SNKRNLVPSPVAHRPLRDRIIHLLALKPYRKPELLLWLERERSSPKDKADLTSVLDEVGK
LIPKDQSYSLKDELYRNVQREWPGYLEEEKQLIHRLLLRKLQPLGNSQLRSPQSNHSLLK
TPGDSPSHLSPAKSLPVKRPLPSDSSNCQTPKKQRLLDQCLPLYSPSHAEYGTNGALSSS
SHGNSRVQIKLEFDKTSNHLQGSPNGLYSPHKLSGSSAIPKLERTGPAPTTTSPKPPQTD
SSLCTDQQPTNGQHKKKRSKKHKDKERERLKPDWIEKSPNLKQNRENLKDQEREKTPVNR
TSAEELPDYLIKYSAIKALEQRQEYKDDFCAEYDEYRALHDRIGAITEMFVQLGSKINTL
SPGTQEYKLMEVQILQKYRKYKKRFPGYREEKKRCEFLHQKLSHIKGLITDYDQAQGLS
NT seq 1800 nt   +upstreamnt  +downstreamnt
atggcagcgttgagacaggagcatcggtatgggctctcctgtggccaaatcaacaaaaac
aacccgaatcaaactctttttcacgtcaaactcacggacactgccatccggaccctcgaa
gcctaccagaacctcaaggcatcactatcaaatcagccagcgatttgcttcaaggggagc
caggggtacgttaagatcccggcgccgacaccagagtctcctgatgaattcagagtcttc
tcgttctacctttccagcgacagcaaagacaaacctcagtccagcttcgactgcattcac
cagtatgtctcaggggagggcagggatcatctggagggccagggcagcattcaggataag
atcacagtgtgtgccaccgatgactcctaccaggcgacccgggagcgcatgtctcaggtg
gagaaggacatttggagccgctcagcaattgagataaagccgggaccaagtaagtgcgtg
aaggtccagaggaaacagggtttggtatcaggctcagatagcaacaacaagcactccccc
agcaataagaggaacctggttcccagccctgtggcacaccggcccttaagggatcgcatc
attcatctcttggccttaaagccctacaggaaacctgagctgctactgtggttggagagg
gagcgctccagtccaaaggacaaggctgacctgacctccgtgctggatgaggttggtaag
ctaatccctaaagaccaaagctactccctcaaggatgagctctacagaaacgtccagaga
gaatggcccggatatctagaggaggagaagcaactcatccataggctcttgctcaggaaa
cttcagccactcggcaatagccagttgaggagtccccagtccaaccattcactcctcaaa
actcccggggactctccttcacatcttagtcctgccaagagtctccccgtgaaacgtcca
ttgccctcagattcatccaactgccagacccccaaaaaacaaagactattagaccagtgt
ttgcctctgtattcgccgtctcatgcagagtacggcaccaatggggctcttagttcctcc
agtcatggaaactctagagtacagattaaactggagttcgacaaaaccagcaatcatctc
caggggagtccaaacggtctgtactcgccacacaaactcagcgggtcatctgctattccc
aaactggagaggacagggccagctcctactacaacaagccctaagcccccacaaactgac
tcgtccctttgcactgatcaacaacctaccaacggacaacataagaagaagaggtccaaa
aagcacaaagacaaagaacgagagcgcttaaaaccagactggattgagaaaagcccgaac
ctgaagcagaaccgagaaaatcttaaagaccaggaaagagagaaaacacctgtcaatcgg
acctccgcagaggaacttcccgactatttaataaaatacagcgccataaaagcactggag
cagcgccaagagtataaagacgacttctgtgcagagtatgacgaatacagagctctccat
gatcggattggggcgatcacagaaatgtttgttcagttgggctcaaagatcaacaccctc
tctccaggaacacaagagtacaagcttatggaggtccaaatactacaaaagtaccgcaag
tataagaaaaggtttcctggctatcgggaagagaagaagcgatgcgagttcctccatcag
aaactgtcgcatatcaaaggcctgatcacagattacgaccaagcacagggactctcctag

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