Pungitius pungitius (ninespine stickleback): 119195938
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Entry
119195938 CDS
T07626
Symbol
cdhr5b
Name
(RefSeq) cadherin-related family member 5 isoform X2
KO
K16505
cadherin-related family member 5
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119195938 (cdhr5b)
Cell adhesion molecules [BR:
ppug04515
]
Cadherins
Cadherin related
119195938 (cdhr5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
119195938
NCBI-ProteinID:
XP_037307167
LinkDB
All DBs
Position
6:complement(21406879..21414693)
Genome browser
AA seq
744 aa
AA seq
DB search
MEAIHPGFTSFCWLLLILLPTSDAQICSAKSQVEFTENNVVGAPVLEITIEENVILGFKA
PVSPDNPFSLEGTRLIANRKLDYETERTYAVNIICTKTTTGEEFPLTIIVLLVNLNDNLP
LFDQDSYSVSVNELSPVGTTVGRFAATDLDGQQLSYSLTPESKGFKLKSQTNPDLLVEMP
LNYEKDPTVHLVLTAVEAPLGGVSHSATTTINLSILDGDNRPPWFQPCSKYEVGGAVVCQ
NNGYSGRVVMNEREPGALPLDPGPLYAIDGDAGIGDEVAYSILSGDNGNLFEINPDSGNI
TMKKAADQLGTIGLTVLAVQKTNSYQFATTSVTISVQVKSLHQPEFQRLQYEGVVSGVGV
MATELNTKDEPLRILATDDDYSGGINPYISYFVTGSSDFAIVGGYLFLTKAHADGPLSLQ
LRAVDTTNNEEASASLFVEVISGLTTTSLPPNTTNTTSSTVSMTSEEVFTSDPTASTSIS
LSTASTSLSTASTSLSTATTTNPTAVAPGAPGAFGVVDMAALGATLAVLLLVCLAAIVAL
VFRIRKADANGKKVFEASVFQSSLGKGGPKGGIQFTNEAFQHDEDGDNLGSGSPAATHFE
ESDDLPVKSSVPLRSVPHGGGDDDDDDGSQAGSDSGDSVGKDVKPILTKERRVDDGYKSV
WFKEDIDPDAKDEVVIIPDSEEEEEEDEDQKPPSGSREEDEDEGPRVRTRRVGFNDTDLD
SGLGVKMDDPEDDSEGDEDINNYL
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgattcatcctggcttcacgtccttctgctggcttcttctgattctgcttcca
acgtccgacgcacaaatctgctctgcaaagtcacaggtggaattcacagaaaacaacgta
gtgggagctccggtcttggagatcaccatcgaagaaaacgtgatcctcgggttcaaagct
cctgtaagcccagacaacccgttcagcttggaaggaacccgtctgatagctaacaggaag
ctggactatgagaccgaaagaacttatgcagtcaatatcatctgcactaagacgaccacc
ggcgaggagttccctctcaccatcattgtacttttggtcaatttgaatgataaccttccg
ttgtttgaccaggactcgtacagcgtgagcgtcaatgagttgtctcctgtaggcacaact
gtgggccgcttcgctgctaccgacttggatggacaacaactctcctactcgctgacgcct
gaatctaagggcttcaagcttaagtcacagaccaacccagatctcctggttgagatgcct
cttaactacgagaaagacccaactgtccatctggtattaaccgctgtggaggcgccgctg
ggcggtgtttcacacagtgctacaaccaccatcaacctctccatcttagacggggacaac
aggccgccgtggttccagccctgcagcaaatacgaggtcgggggggcagttgtctgccag
aacaacggctacagcggcagagttgtcatgaacgaacgagagcccggagcgctgcctctg
gatcccgggccgctgtacgccatcgacggagacgcggggatcggagacgaggtggcctac
tccatcttaagcggagacaacggcaatctgttcgagatcaaccccgactcggggaacatc
accatgaagaaggcggccgaccagctggggacgatcggactgacggttctggctgttcaa
aagacaaacagctaccagtttgccaccacctccgtcacaatcagcgtgcaggtgaagagc
ctccaccagcccgagtttcagaggttgcagtacgaaggcgtcgtctccggggtgggcgtc
atggcgacggagctcaacaccaaggacgagccgctgcggatcctcgccacggacgacgac
tactccgggggcataaatccctacatctcctactttgttaccgggagcagtgattttgcc
atcgtcggcggctatttgttcctgacaaaggcccacgcggacggcccattgtctctgcag
ctgagggccgtggacaccaccaacaatgaagaagcttcggcgtcgctgtttgtggaggtg
atttcaggtctaaccaccaccagtttgcctccgaacaccacaaacacaacgtcctccacc
gtcagcatgacctcagaggaagtgttcacctccgacccaacggcctccacctccatcagc
ctctcaaccgcctccaccagcctctcaaccgcctccaccagcctctcaacggccaccacc
actaatccaacagctgttgccccgggcgccccgggcgcctttggggtggtggacatggcg
gcgctcggggccacgctggccgtcctgctgctcgtctgcctggcggccatcgtggcgctc
gtgtttcgcatccggaaggcggacgcgaacgggaagaaggtcttcgaagccagcgtcttc
cagagctcgctgggtaaaggcggtccgaaggggggcatccagttcaccaacgaggccttc
caacacgatgaagatggagataacctgggctccgggagcccggcggcgacacacttcgaa
gagtcggatgaccttccagtgaagtcttcagtgccgctgcgttctgtcccgcacggtggt
ggtgatgatgatgatgatgatggcagccaggcgggctcggacagcggcgacagcgtgggg
aaggatgtgaaacccatcctgaccaaggagaggcgcgtggacgacgggtacaagtccgtc
tggttcaaggaggacatcgaccccgacgccaaggacgaggtggtcatcatcccggacagc
gaggaggaggaggaggaggacgaggaccagaagccgccgtccggtagcagagaggaagat
gaagacgaaggcccgcgggtgagaacccggagggtcggctttaacgacaccgatctggac
agcggactcggggtgaagatggatgatccagaagatgactcagagggtgacgaagacatt
aacaattatctgtga
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