Pungitius pungitius (ninespine stickleback): 119195986
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Entry
119195986 CDS
T07626
Name
(RefSeq) lymphocyte-specific protein 1-like isoform X1
KO
K12327
caldesmon
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
119195986
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119195986
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
119195986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
119195986
NCBI-ProteinID:
XP_037307244
LinkDB
All DBs
Position
4:24126358..24145792
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AA seq
615 aa
AA seq
DB search
MSESMRRKSSSRQLLQNLISVTAERSQEDAEEVERERRRRARETQRGEGGPSRREPPQHD
ELRAHGAQLDEELKPRCNLVQEEDEGFSDWSHKLENRGEQEVQDVSRRPSTRRKPEPGEE
KQQKGEEEEEKEVKEGCEPERSSRSKEASSRPPQKMTCAREEVRMSYSSTVFVSQDARLQ
HTDRTSYLVAGTMRPRRGACRVDGEVEQEEQKEEVQAALQRESAETQRSSRDEEDHEDEL
SFRREEEECLYLRGEEEKEEHRMLDKSWMKSRRGEEARRRSEEARSEETRKSEEASRRSE
EARSEEARRRSEEARSEETRKSEEASRRSEEARSEEARRRSEEARSEETRKSEEASRRSE
EARSEEARRRSEEARSEEPCRRSDETRKSEEASRRSEEARSEEASRRSAASLCCSSDGEE
SLNYGPMSPTFKKLLIQFYPDEVNSRVSTDGKCSIMERTESLRKSTSHIKKTPSPVAVSK
IDKKLELYAQALEVSSKDGRPGGQAPTDLTSPAEPVSSRKSLFEAGDTWRHDAPPGAPSK
DADGLKVGVANLINQWVRGSEGGSRCSSPCRPAENSSGKRSKFVVTGHGKYEKVPVEDCR
EEAPCPPGGHFYEDL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtccatgaggaggaagagctccagcagacagctgctgcagaacctcatcagc
gtgacggcggagcgcagccaggaggacgccgaggaggtggagcgggagaggaggaggaga
gccagggagacgcagagaggagagggggggccctcccggcgggagcccccccagcacgac
gagctcagagcacacggcgcacagttggacgaggagctgaagcccaggtgcaacctggtc
caggaggaggacgagggcttcagcgactggagccacaagttggagaaccgcggtgagcag
gaggtgcaagatgtctccaggagaccttcaaccaggcgcaaaccagagcccggagaggag
aaacagcagaagggtgaagaagaggaggagaaagaagtgaaggagggatgcgagccagag
aggagcagtcggtccaaggaagcttcctcaagacctccacagaagatgacctgcgccaga
gaggaggtcaggatgtcctacagctccacggtcttcgtgtcccaggacgcccggctgcag
cacaccgacaggacgtcctacctggtggcgggaaccatgaggcctcgcagaggcgcctgc
agggtggacggggaggtggagcaggaggagcagaaggaggaggtgcaggctgctctgcag
agggagtcagcagaaacccaacggagctccagagatgaagaagatcatgaagatgaactg
agcttcaggcgtgaagaggaggaatgcctctatctgcgaggggaggaggagaaggaggag
cacaggatgttagacaagagctggatgaagagcaggaggggggaggaggcccgcaggagg
agcgaggaggcgaggagtgaggagaccagaaagagtgaggaggccagcaggcggagcgag
gaggcgaggagtgaggaggcccgcaggaggagcgaggaggcgaggagtgaggagaccaga
aagagtgaggaggccagcaggcggagcgaggaggcgaggagtgaggaggcccgcaggagg
agtgaggaggcgaggagtgaggagaccagaaagagtgaggaggccagcaggaggagcgag
gaggcgaggagtgaggaggcccgcaggagaagtgaggaggcgaggagtgaggagccctgc
aggaggagtgatgagaccagaaagagtgaggaggccagcaggaggagcgaggaggcgagg
agtgaggaggccagcaggagatctgcagcctccctttgctgcagcagtgatggcgaggag
tcgttaaactacggccccatgagccccacgtttaagaaactcctgatccagttctacccg
gacgaggtgaacagcagggtctcaacagacggtaaatgctcgatcatggagaggaccgag
tctctgaggaaaagcaccagtcacatcaagaagactccgtcaccggttgccgtctcgaag
attgacaagaagctggagctatacgcacaagccctcgaggtctcctcaaaggacggccgg
ccggggggtcaggcgccgacggacctgacgagtcccgccgagcccgtctcctccaggaag
agcctgtttgaggccggagacacctggagacacgacgcccccccgggcgccccatcgaag
gatgcagacggattgaaagtgggtgtggctaatctcattaaccagtgggtgagaggaagc
gaaggcgggagcaggtgcagctcgccatgcagaccagcggagaactcctccggcaaaagg
tccaagttcgtggtgacgggtcacggaaagtacgagaaggttcctgtggaggactgcaga
gaggaggccccctgcccgccaggtggacatttctacgaggatctgtga
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