Pungitius pungitius (ninespine stickleback): 119196052
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Entry
119196052 CDS
T07626
Symbol
ambra1b
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1B
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04137
Mitophagy - animal
ppug04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119196052 (ambra1b)
04137 Mitophagy - animal
119196052 (ambra1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119196052 (ambra1b)
03029 Mitochondrial biogenesis [BR:
ppug03029
]
119196052 (ambra1b)
Membrane trafficking [BR:
ppug04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
119196052 (ambra1b)
Mitochondrial biogenesis [BR:
ppug03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
119196052 (ambra1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WDR55
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
119196052
NCBI-ProteinID:
XP_037307328
LinkDB
All DBs
Position
6:complement(22339000..22353321)
Genome browser
AA seq
1335 aa
AA seq
DB search
MASRQRNSVRILLSRERGSQTFGSQRLLQLLVEEKIRWMKWQSQKVELPDSPRSTFLLAF
SPDRTLMASTHVNHNIYITEVKTGKCLHSLVGHRRTPWCVTFHPTIPGLVASGCLDGEVR
IWDLHGGSENWFTESNVAIASLAFHPTAQLLLIATNNELHFWDWSRPEPFAVVKTASDTE
RVRLVRFDPLGHNLLTATVNPSNQQSEEDSEVPMDSVEMPHFRQRSFLPSQPVRRTPILH
NFLHILSSRSPGAPPGVEQPRPPGEGGGVGEPPGVPLAQYTGAERAPPFLGCTQHLGMVC
LCSRCAAGRSADAPQPDAPPHDAPPPSTFSSARTEPRQPSERPSAFTSVYYSAGASLNPP
APSSGEAHAAPRPGPDWTRNLLSMREGGVGPGMLPPRTSSSSISLLSVLRQQDGSSHSPV
YTSASEGRGFPPQQGDPGGRDAAGTSSGHHPFWDGSRGNTASFRNVLQCNLSRYFMEFDR
MQDLEPPLGGGSMGEGGPEQSPELLNNNMDPERPGPSSSSSTSSPTIIHYQPPLPPPPVP
HNLENSAPPPASRGHLNRCRACHNLLTFNHDSQRWERTNQASSTSASALEPPSSSSSTFP
SSSSSSWQPEEGRRTLEAPPSESEVPPEPSEQPPTTLRGGGSVAFPIAPTPTRSGEQTVG
LVYNQDTAQWERVYRQAAAGRPLEPPEALSQEMPVDPPDEDSLRRRLLESSLLSLSRYDM
SGSRDHPIYPDPARLSPAAYYAQRMIQYLSRRDSIRQRSLRYQQNRLRAMSSSSDSPVSN
PPGAMDNSDVDFEELDDNGERARHRTTRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHER
GQPGLATHSSVNRVLAGASIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLV
PNCKIYNDASCDISADGQLLAVFIPSSQRGFPDEGILAIYSLAPHNLGEMLYTKRFGPNA
ISVSLSPMGCYVMVGLASRRILLHPTTDHMVAQVFRLQQPHGGETSIRMVFNVVYPMAPD
QRRHVSINSARWLPDPGMGLAYGTNKGDLVICRPVFYRSDGESPAESSSEPLFSVNNGGT
RPRGSERPGPNRPGWRLDRDMGLMNAIGLQPRHPAPSVTSQGTQTPIIQLQNAETQTERE
LAEPRTMQPATNVPPATPSTSHAAGGGEAAPPSGRALEGGVLGEVALAEATTSTAGESPD
SGSGEDALARIRRLIAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRGSQTAAGASR
PPDPLLLAQTHGPPPQAQQPAPWAPRPPALDSVPGPSSSLLLSSPSPPPSSSRSPAPSGG
GGNSSNSYPGDPYSR
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccgtcagaggaactcggtgcgcatcctgttgagccgggagcgaggctcccag
accttcggctcccagaggctcctgcagctgctggtggaggagaagatccgctggatgaag
tggcagagtcagaaagtggagctgcctgacagcccccgctccaccttcctgttggccttc
agccccgacagaaccctgatggcctccacccacgtcaaccacaacatttacataacggag
gtgaagaccggaaagtgcctgcactccctggtgggccaccggaggaccccctggtgcgtg
acctttcaccccaccatcccaggcctggtggcatctggctgcctggacggggaggtccgg
atctgggacctgcatggcggcagcgagaactggttcacagagagcaacgtggccatcgcc
tcgctggccttccaccccacggcccagctgctcctcatcgccaccaacaacgagctccac
ttctgggactggagccgccccgagcccttcgccgtggtgaagaccgccagcgacaccgag
agagtccggttggtcaggttcgaccctcttggtcacaacctgctgacggccaccgtgaac
ccgtccaaccagcagagcgaggaggactcggaggttcccatggacagcgtggagatgcct
catttccgtcagcgctccttcctgccctcccagccggtgcgccgcacccccatcctgcac
aacttcctccacatcctgtcgtcccgctcgccgggggccccgccgggggttgagcagccg
cgacctccgggggaaggggggggcgtgggagagcctcccggcgtgcccctggcccagtac
actggcgctgagcgcgccccccccttcctgggatgcacccagcacctgggcatggtgtgc
ctgtgcagccgctgcgctgcaggacgcagtgccgacgccccccagcccgacgcccccccc
cacgacgcccccccgccctccaccttctcctcggcgcgcacggagcccaggcagccgtca
gagcgcccctcggccttcacctccgtctactacagcgccggcgcctcccttaaccccccc
gcgcccagcagcggggaggcgcacgctgcccccagaccaggacccgactggacccgcaac
ctgctgagtatgagggaggggggggtcggccctggaatgctgccccccaggacttcctcc
tcctccatcagcctgctgtcggtgctgcgtcagcaggacggctcctcccactcccctgtc
tacacctccgcatccgaggggcggggtttccccccccagcagggagaccccggggggcgg
gatgccgccggcaccagcagcgggcaccaccccttctgggacggctcccgtggcaacacg
gcctccttccgcaatgtgctgcagtgcaacctgagccgctacttcatggagtttgaccgc
atgcaggacctggagcccccactgggggggggcagcatgggcgagggggggccggagcag
agcccagagctgttgaacaacaacatggacccagaaaggcctgggccttcctcctcttcc
tccacctcctcgcccacaatcatccactaccagcctcctctccctcctccccccgtcccc
cacaacctggagaacagtgccccccccccggcctccaggggccacctgaaccgctgccgg
gcctgccacaacctgctgaccttcaaccacgactcccagcgttgggagcggaccaaccag
gcctcctcaacctctgcctccgctctggagccgccctcctcttcctcctccaccttccct
tcgtcatcctcctcctcctggcagcccgaggagggcaggaggacactagaagccccgccc
tcggagagcgaggttcccccggagcccagcgagcagccccctaccaccctcaggggcgga
ggctccgtggccttccccattgctccgacccccacccggagtggggagcagaccgtgggc
ctggtgtacaaccaggacacggcgcagtgggagcgggtctacaggcaggctgcagccggc
aggccgctggagcccccggaggccctgagccaggagatgcccgtggacccccctgacgag
gactccctgaggaggcgcctcctggaatcctccctgttatcgttgtctcgctacgacatg
tcgggatccagagaccaccccatctaccccgacccagccagactctcccccgctgcgtac
tacgctcagaggatgatccagtacctttcgaggagggacagcatccgtcagcggtccctt
cggtaccagcagaaccgcctgcgggcgatgtcgtcctcctccgacagtccggtcagcaac
ccgcccggcgccatggacaacagtgacgtggactttgaggagctggatgataacggggag
cgagcgaggcaccggaccactcgtaacgccaggatgtcggctccttctttgggtcgcttt
gtcccgcggcgcttcctgctccccgagtaccttccctacgccgggatcttccacgagaga
gggcagcccggcctggcgactcactcctccgtcaacagagtgctggctggtgcgtcgata
ggagacggtcagtccgcggtggccagcaacatcgccaacaccacctaccgtctgcagtgg
tgggacttcaccaaatttgatctgccggagatcagcaacgcctcggtcaacgtcctggtg
ccaaactgtaagatctacaacgacgccagctgcgacatctctgcggacggccagctgctg
gcggtcttcattcccagcagccagcggggcttccctgacgagggcatcctggccatctac
tcgctggctcctcacaacctgggggagatgctctacaccaagagatttggccccaatgct
atctccgttagcctgtctccgatgggttgctacgtcatggtggggctggcctctcgcagg
atcctgctgcaccccaccaccgaccacatggtggcgcaagtcttccgcctgcagcagcct
cacggaggagagacctccatcaggatggtgttcaacgtggtctaccccatggctccagac
cagcggcgccacgtcagcatcaactcggcccgctggctccccgacccggggatgggtttg
gcttacggcaccaacaagggagacctggtgatctgccggcccgtgttctaccggagcgac
ggggagagtccggccgagtccagcagcgagccgctgttctccgtcaacaacggaggaacc
cgcccccgagggtcagagcgcccggggcccaaccgccccggctggaggctggaccgggac
atgggcctgatgaacgccatcggccttcagccccgacaccccgccccttcagtgacatca
cagggaacgcagacgccaatcatccagctgcagaatgccgagacccagacggagagggag
ctggcagagccccggaccatgcagcccgcaaccaatgttcctcctgcgactccgtccacg
agccatgcagctggcgggggggaggctgcgcctccgagcggcagagcgttggagggcggg
gtcctgggtgaagtggccttggcggaggccaccacctccacagccggcgagtctcctgac
tcgggctccggtgaagacgcgctggctcggatccgccggctgatagccgagggcgggatg
accgccgtggtgcagcgggagcagagcaccaccatggcgtccatggggggcttcggcaac
aacatcatcgtcagccaccggatccaccgcggctcccagaccgccgccggggcctccagg
cccccggaccccctcctcctggcccagacccacggcccgcccccccaggcccagcagccg
gccccctgggccccccggccccctgccctggactctgtgccgggcccctcctcctccctc
ctgctctcgtccccctcgccccccccctcctcctctcgcagccctgcccccagcggtggg
gggggcaactcctccaacagttacccgggcgacccgtacagccggtag
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