Pungitius pungitius (ninespine stickleback): 119196069
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Entry
119196069 CDS
T07626
Symbol
lsp1a
Name
(RefSeq) non-muscle caldesmon isoform X4
KO
K12327
caldesmon
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
119196069 (lsp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119196069 (lsp1a)
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
119196069 (lsp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
119196069
NCBI-ProteinID:
XP_037307366
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Position
6:complement(22001043..22018033)
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AA seq
532 aa
AA seq
DB search
MSHALLRRNSNKQGLQTLMRLTAQRSVEDAEELEREQRRRARETSRPGEASPEDRTPAED
GMSHGDPKPSRSLALDEDEGFSDWTQRRERQRQQRLQELSQGGEEDEDEYAVDGVRASDP
LQRQERLEGDGPGGELERRKDREEKAIGAERMRREEEEDMRKREEVMIGRKEESQRPNTE
VERRKEVQISYTSKVVLHHEPKSANGDATKEEVTSHKNIKTQRSSRAVESEEADTILETE
RRLEKIRQGLQQKGNQELEQLRHRQAEAEQELEQLKRRREERRRARAEEQRRREEEEQQR
LAREEEERRRMKEDMERRRMEAAERMKSLSTSSVDGDEVFSPFGPKTPTNKISERTESLS
RALKKSHSFKKTLVLLPKMDDKMEQYAHAVENSQEVRAVKASLADLPSSPVVVSSKKNLF
EAGEAWSQGPPRGPTCKDAEGLKVGVANRITQWALGPCDGGRQSPGKPTDVKPGDVMQKK
NMWEGIGDSTGRPDQTAKSSAAGKKYKFVVTGHGKYEKMAVNGADGSYLDDY
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacgctctgcttaggaggaactccaacaaacagggtcttcagaccctcatgagg
ctgacggctcagaggagcgtggaggacgccgaggagctggagcgcgagcagcgccgcaga
gctcgggagacatcgcggcccggagaggcgtccccggaggacaggacgccggcggaggac
ggcatgtcccacggcgacccgaagcccagccgctctttggctctggacgaggacgaaggc
ttcagcgactggacgcagcgccgagagagacagaggcagcagcgtctgcaggagctcagc
cagggaggcgaggaggacgaggacgagtacgccgttgacggagtccgggcctctgacccg
ctccagaggcaggagcgcttggaaggagacggacccgggggggagctggagaggaggaag
gatcgggaggagaaagccattggagctgagaggatgaggagggaggaagaggaggacatg
aggaagagagaggaggtgatgatcgggaggaaggaggagagtcaaaggccgaacacagag
gtggagagaagaaaagaggttcagatctcctacacatccaaggttgttcttcaccatgag
ccaaaatccgccaacggagacgccaccaaggaggaagtgacatcgcacaagaacatcaag
acgcaaaggtcctccagagccgtggagtcagaggaggcggataccatcctggagacggag
cgccggctggagaagatccggcagggcctccagcagaagggcaaccaggagctggagcag
ctgaggcaccggcaggccgaggccgagcaggagctggagcagctgaagaggaggcgcgag
gagcggcggagggcccgggccgaggagcagcggcggagggaggaggaggagcagcagcgg
ctggcccgggaggaggaggaaaggaggcgcatgaaggaggacatggagaggaggaggatg
gaggcggcggagaggatgaagtccctgagcacgtccagcgtggacggagacgaggtcttc
agtcccttcggccccaagactccaaccaacaagatctcagagagaacggagtcgctgagc
cgcgcgctgaagaaaagtcacagcttcaagaagacgctcgttctgctgccaaagatggac
gacaagatggagcagtacgcacacgccgtggagaactcccaggaggtgcgtgcagtgaag
gcatcgctggccgacctgcccagctcacctgtagtcgtctcctccaagaagaacctgttt
gaggcgggtgaagcctggagccaggggccccccaggggccccacctgtaaggacgccgag
gggctgaaagtgggcgtggccaaccggatcacccaatgggcgctgggtccatgtgacggc
ggtcggcagtcgccgggcaaaccgacagatgtgaagcccggagacgtgatgcagaaaaag
aacatgtgggaaggtatcggagactcgaccggacgaccggaccaaacagccaagagctca
gcagccggtaaaaagtacaaatttgtggtcaccggccacggaaaatacgagaagatggcg
gtgaacggagcggacggttcatatcttgatgattactaa
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