Pungitius pungitius (ninespine stickleback): 119196094
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Entry
119196094 CDS
T07626
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03420
Nucleotide excision repair
ppug04115
p53 signaling pathway
ppug04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119196094 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
119196094 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
119196094 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119196094 (ddb2)
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119196094 (ddb2)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119196094 (ddb2)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
119196094 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
119196094
NCBI-ProteinID:
XP_037307414
LinkDB
All DBs
Position
6:complement(15618987..15622612)
Genome browser
AA seq
489 aa
AA seq
DB search
MKTRQAKSADAPESKAKPKKATGGSSGPTLSKKIRNRKHGETSKRGPPAGVQRRGGYSSI
LHYIYKSSLGETLHSQMRRCLQQPFVRSLSSYHFHGATSPFNRRITCLEWHPAHPTTLAM
GSKGGDIYLWDFEVPTKKVFLQGSGAGDYIGGMKFCPTDLSRVYVASGEGTLTTQSFEGG
RTPTILSRTQDCGHDHHNVCYWYCCVDVSISRRMLVTGDNVGQLVLLGLDGQKIFSNKLH
KAKVTHAEFNSCCDWLLATASVDHTVKLWDLRNIKDKKSFLHEMPHEKAVNSAYFNPLDC
SKLLTTDQYDEIRVYSSPDWSKPQHVIQHPHRQFQHLTPIKATWHPIYDLIVAGRYPDDR
VFPGDQRTIDVYDANTSELVCQLQDPSAPGIKSINKFNPMGDVIGTGMGVTALVWNRDMS
LIGEQPKEQEDSSTSADSLRGQQRSRQRSSRDGKAPAMDAKLKKKLASLEESETTTVCTK
QKPTRMRKK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaagacaggcgaagtccgcagatgcaccggaatccaaggctaaaccgaagaaa
gcaacagggggaagttcaggtccaacgctctccaaaaaaatacgaaacagaaaacatgga
gaaacatccaaacgaggtcctcctgcaggggttcagaggagaggagggtacagcagcatc
ctgcactacatttacaagagcagtctgggagaaacccttcactcccagatgaggcggtgt
ctgcagcaaccctttgtccgctcgctgtcgtcctatcacttccacggtgccaccagcccc
tttaaccggagaatcacctgtctggagtggcaccccgctcatcccaccacactggccatg
ggctccaaaggcggtgacatatatctgtgggattttgaggtgcccactaaaaaagtcttt
cttcaagggagcggagcgggagactatattggagggatgaaattttgcccgacggacctt
tcccgggtctacgtggcctctggcgagggcacgttgaccacgcagagcttcgaggggggc
cgcacgcccaccattctgtccagaactcaagactgtggccacgatcaccacaatgtttgt
tactggtactgctgcgtggatgtgtctataagtcggaggatgctcgtgacaggggacaac
gtgggacagcttgtactcctgggtttggatggccaaaagattttcagtaacaagctgcac
aaagccaaagtgacccacgcagagttcaactcctgctgtgactggttgttggcaacggcc
tcagtcgaccacactgtgaaactttgggatctgagaaacatcaaagataagaagagcttc
ctccatgagatgcctcacgagaaagctgtgaactcggcctatttcaacccgttggactgc
tccaagctgctcaccaccgatcagtacgacgagatccgggtctactcttctcctgattgg
tcgaagcctcaacatgtcatccaacatccacacagacagttccagcatctcacgcccatc
aaggccacatggcaccctatctatgacctcatcgtggctggccgctaccctgatgaccgg
gttttccctggagaccagaggaccatcgacgtctatgatgccaacacgtccgaacttgtg
tgtcagctgcaagatcccagcgctccaggaatcaaatctatcaacaaattcaatccaatg
ggtgatgttattggaactggaatgggtgtgacggcgctggtgtggaacagagacatgtcg
ttgatcggtgaacagcccaaagagcaggaggactcttctacatctgcggacagtttaaga
gggcagcagaggagtcggcagcgctccagcagggacgggaaagctcccgctatggatgca
aagctcaagaagaaactagcttctctggaggaatcggagaccacgaccgtgtgcaccaaa
caaaaaccaacacggatgaggaagaagtga
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