Pungitius pungitius (ninespine stickleback): 119196104
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Entry
119196104 CDS
T07626
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119196104
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
119196104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_9
Ig_2
LRR_Zer-1
LRR_RPS2
Ig_C17orf99
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
119196104
NCBI-ProteinID:
XP_037307438
LinkDB
All DBs
Position
4:complement(22948059..22970011)
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AA seq
623 aa
AA seq
DB search
MTVLVRSRMVLGEAGGHSYLVACWQPILILMLGTVLSGSTTGCPSRCDCNGQERSVVCHR
RRLAALPEGIPTETRLLDLSKNRLRTVGTEEFIDYPQLEELQLNENTISSIEPGAFGNLM
NLRTLGLRNNQLKLIQLGVFTGLTNLTQLDISENKIVILLDYMFQELYNLRALEVGDNDL
VFISPRSFHGLSNLESLNIEGCNLASVPTDALSHLHNLLSLRLRYLNVTVIKDYSFKRLY
RLRVLEISQMPALETMTGKCLFGLNLTSLSVTNCSLSGIPYQAVSHLRYLRLLNLSFNPI
RTVEGNKLFNLQKLQAFHLAGGRLDAIEPYSFRGLNHLRVLNVSGNSLSTLEESVFHSVG
NLETLALYENPLACDCRLLWVFRRRWRLNFNRQQPMCASPEVVQGKEFKDFPDILPSDYF
ICQKSKIVDYKVQESHVDDGTTVHFTCQAEGDPVPVIMWLSPKKDYITTKTAGSRLSVSG
EGTLEVRYAQIQDNGTYLCIASNAAGNDTKAAHLFVHSYSPNWPHQPNKTFAFISNQPSD
EGANVTRASVPFPFDVKTLIIATTMGFISFLGVVLFCLVILFLWSRGKQNRTTSIEVEYV
PPKEEPEEASPTEAPVQFNMKIM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctggtgagaagcaggatggtgttgggggaggcaggagggcacagctacttg
gtggcatgctggcagcccatcctgatcctcatgcttggcaccgtcctttctggatccacc
accggctgcccctcccgctgcgactgcaacggccaggagcgctccgtcgtgtgccaccga
cggaggctggcagccctccccgagggcatacccaccgaaaccaggctgctcgacctgagc
aagaaccgcctgagaaccgtgggcaccgaggagttcatcgactaccctcagctggaggag
ctgcagctcaacgagaacactatttcatccatcgagcccggggccttcggcaacctgatg
aacctccggactctgggtctgcgcaacaaccagctcaagctcatccagctgggggtgttc
acaggcctaaccaacctcacgcagctggatataagcgaaaacaaaattgtcatactcctt
gattatatgttccaggagctgtacaacctgagggccctagaggtcggtgacaacgacctg
gtattcatctcgcctcgatcatttcacggcctgagcaaccttgaaagcctcaacattgag
gggtgcaatctggcctcagtgcccactgacgccctcagccatctgcataacctgctgtcg
cttcgactacgctatctcaacgtcaccgtcataaaggattactcctttaagaggctttat
cggctcagagtgctcgagatttcccaaatgcccgctctggagaccatgaccggaaaatgc
ttgtttgggctcaacctcacatcattgtccgtcacaaactgcagcctctccggcatcccc
taccaagccgtcagccacctccgatatcttcgccttttgaatttgtctttcaatcccatt
cgtactgtggaagggaacaaactgttcaatctccagaagcttcaggcttttcatttggcg
ggtgggcgattggatgccattgagccctactcattccggggactcaaccacctccgtgtg
ctcaacgtatccggcaacagcctgagcaccctggaggagtctgtcttccactcggtgggg
aacctggagacgctggcgttgtacgaaaacccgttggcgtgcgactgccgcttgctctgg
gtcttccgccggcggtggaggctcaactttaacagacagcagcccatgtgcgcttcacca
gaggtcgttcaaggaaaagagttcaaggacttcccggacattctcccttctgactatttc
atctgccagaaatcaaagatcgtggattataaggtccaagaaagccacgtggacgacgga
acaacggttcatttcacttgccaagctgagggcgatccagtccccgtgataatgtggcta
tcccccaagaaggactacatcacgaccaagactgcggggtcaagactttctgtgtctggc
gagggcacgttggaggttcgctacgcccagatccaagacaacggtacctacttgtgcatc
gcaagcaacgcggcaggcaacgacaccaaagccgctcacctttttgtgcacagctactcc
cccaactggccccaccagccgaacaagacattcgccttcatctcaaaccagcccagcgac
gaaggtgcaaatgtgacccgggcctcagttccattcccgtttgatgtaaagaccctcatt
atcgcaaccaccatgggatttatctctttcctgggagtcgtcctcttctgtcttgtgata
ttgttcctctggagtcgagggaaacaaaatagaacaacaagtatagaggttgagtacgtg
ccgcctaaggaggagccagaggaggccagtccgaccgaggcacccgtacaattcaacatg
aaaatcatgtga
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