Pungitius pungitius (ninespine stickleback): 119196130
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Entry
119196130 CDS
T07626
Symbol
nup160
Name
(RefSeq) nuclear pore complex protein Nup160
KO
K14303
nuclear pore complex protein Nup160
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119196130 (nup160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119196130 (nup160)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119196130 (nup160)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119196130 (nup160)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119196130 (nup160)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NUP160_120_M
Beta-prop_Nup120_160
TPR_Nup160_C
NUP160_helical
HEAT_Nup120
TPR_1
TPR_2
DUF3471
Motif
Other DBs
NCBI-GeneID:
119196130
NCBI-ProteinID:
XP_037307486
LinkDB
All DBs
Position
6:complement(22517768..22528160)
Genome browser
AA seq
1390 aa
AA seq
DB search
MAAVLERSFIEICGFERETQHRFRDVTVNLPGVSALPGGQKFPDSGGAFHYEESGKLLSV
TSNRFIHWCTAGDSVQLVEQSLDTNLLNNAVRLQLSHCSVLPGGVVVQETLSNVIILVST
NQSVHRLVLPHPTRMYRSELVTELHMQSIFTDVGKLSLHEPSHSALIPSVLGQNGSPSTS
TAWLSESGEAHYALASPAGGIRVVSLPPLGTQGSVSVVELKRSSMMQRLSGWMPSSIRGE
QSPADLALSLAVRELEEDTFIFALCQDHKLRMWSIREQACLLEADMLDYMPSCRGLKRQS
GTAHRLRVSSSLSGLCVGVYLSVPQRGQFTVLQLVATDNNRYSLDHVSSLFTTQETLVDF
SLTSTDIWAVWVDESNNTVVKYINFEHNTAGQWNQVFVQPAPEEEVHIGVDQDPRETYLD
VIFSPLHFTSSAIVKALQIYRRGSQRIIDPSWDNLKKEVTVAVESELQSSVTEFEFSQEE
YRQLQVEFWSKFYACCLQYQEVQSLPVGLSVSYSTGLVCLLKKGFVSFLLPCFAVDHLYL
SSDEYLFSEEETPITEDPDLGRDLLQLVQCLRLVSDAVSGGMAYEMEKALEHLESPERAA
ELVLENLLSNDEENVIEDIQNKLQDIRNPMAAMMVLLREMDLETDSDVGVDGLVLPGLNL
RISLSQQLGSSSAVSVVCQAVCHLAMTRTLFCRDLLILQKLYLRFGDNMFLGGGAQLLQL
QQDLIPRSSNLLSSYYLLKHVSQSLASSVPIDIIDANLQHLTVLELSDAPTLAASRAASS
PQTVLELFYQTAARKLIISQIYSQQQSSSVLLWSHMISNVVILLAQLLWPSNSGFQFPEC
LMGNCQYTQLQEYVRLIGPWCQVNIGSCRFMLGQCYLANGEGHKALQCFQEAATEVEKEE
FLIRLTGTEEEEAASTPRLQYYNKVLRLLEDVGLPELVIQLASLAITEAVSDINSQAALW
TRIFKHHLDLGHNSEAYEALTQNPDSSMQQDCLRQLVVVLCERSQLQDLVQFSYVNLHDE
VVGIIESRARGLDLLAHNYYELLYAFHINRHNFRKAGSVMFELGMRLGREVRTRLGLQKQ
VNCYLAALNCLRLIRPEYAWIVQPVSGAMYERPGASPKRNSDGDFSSEPVQRQVDILELK
DLEKEYVVSRSRLTLAQHHPPSAAIAGSASAEEMVTLLVQTGLFDSALSICQTFKLNLTS
VFEGLTFKCIKLQFGGEETQNEAWSWLAANQLSSVVNTKESSATDEAWQLLASYLDRYPS
ANARHHRCVISKLLSHGVPLPDWLIKSYKEVDAASLLRLYLNFDLLDAAAELVLEYVDAL
LGRGHQYFGIERPLSATSSSVWLPYTSIDQLLHTLNETQTNSSVYNKVRDKLEDYHKLVE
QTTKRRLVTQ
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgttggagcggagcttcatagagatctgcggatttgagagagaaactcag
cacaggttccgagatgtgaccgtaaacctccccggtgtgagtgctcttcctggaggacag
aagtttcctgacagcgggggtgcgttccattatgaagagagtgggaagctgctgtctgtc
accagtaacagattcattcactggtgcactgctggtgacagcgttcagctggtggaacag
tctctggacaccaacttgctgaacaatgcggtcaggctgcagctgagtcactgcagcgtt
ctacctgggggagtcgtggtccaggaaaccctcagcaacgtcatcatcctggtctccacc
aatcagagcgtccacaggctggtgctgccccaccccacccgcatgtaccgcagtgagctg
gtaacggagctccacatgcagtcaatcttcacggacgtggggaagctgagtctgcatgaa
ccttctcacagcgccctcatccccagcgtactgggccagaatgggagtcccagcacctcc
acagcctggctcagtgagtccggggaggcccactacgctctggcttcacctgccggaggc
atcagggtggtctctctgccccctctcggcacacaaggcagcgtgtcggtggtggagctg
aaaaggagctccatgatgcagaggttgtcgggctggatgccctcatccatccggggggag
cagagtccagctgacctggccctcagtctggctgtcagggagctggaggaggacaccttc
atctttgctctctgtcaggaccacaagctgcgcatgtggtccatcagggagcaggcgtgt
ctgctggaggcggacatgctggactacatgccgtcctgcagaggactgaagcgtcagtct
ggcacggctcaccgcctgagggtctcgtcctccttgtccggcctctgtgtcggcgtctac
ctgtccgtccctcagagaggacagttcacagtcctgcagctggtcgccaccgacaacaac
cgctacagcctggaccacgtctcctctctgttcaccacacaggagacactggtggacttc
tctctgacctccacagacatctgggccgtctgggtggacgaatccaacaacactgtggtc
aaatatatcaactttgaacataacacagcaggtcagtggaatcaggtgtttgttcagcct
gcacctgaagaagaagtccatattggagtggaccaggacccccgagagacgtacctggac
gtgatcttctctcctctgcacttcacttcttcagcaatagttaaagctctgcagatatac
cgtcgaggctcgcagaggatcattgatccgtcctgggacaatctgaagaaggaggtgacc
gtggccgtggagagtgagctccagagcagtgtgacagagtttgagttttctcaggaggag
taccgtcaacttcaggtggagttctggtccaagttctatgcctgctgtcttcagtaccag
gaggtccagtccctccctgtgggtctcagtgtgagctacagcactgggctggtgtgcctg
ctgaagaagggcttcgtttcgttcctcctgccttgtttcgctgtggatcatctctacttg
tcttctgatgagtacttgttctctgaggaggagacgcccataaccgaagaccctgatcta
ggccgggaccttctgcagctggttcagtgtctgcggctggtcagtgatgcggtttctgga
gggatggcctatgagatggagaaagctctggaacaccttgagtcacctgagagggcagct
gaactggttctggagaacctgctctccaatgacgaagagaacgtgattgaggacatccag
aacaaactgcaggacatccggaaccctatggcagctatgatggttctgctgagggagatg
gacctggagacggactcggacgtgggcgtagatggactcgtcctccctggtctcaacctg
aggatcagcctgtctcaacagttgggaagcagctctgcggtttctgtggtctgtcaggcc
gtgtgtcacttggccatgaccagaacccttttctgtagagacctgctgatcctgcagaaa
ctctacctgcgctttggagacaacatgtttctgggcgggggggctcagctgctgcagctc
cagcaggacttaatccctcggagctccaaccttctctcctcttattacctcctcaaacac
gtcagtcagagcctggcctcctctgtgcccatcgacatcatagacgcaaacttgcagcac
ctcaccgtgttggagctgtcggacgccccgacgctcgccgccagccgagcagcgtcgagt
cctcagaccgtgctggagctcttctatcagactgcagccaggaagctgatcatctctcag
atctactctcagcagcagagcagctcggttctcctctggagtcacatgatctccaacgtg
gtcatcctcctggcacagctgctttggcccagtaactctgggttccagttcccagagtgc
ctgatgggtaactgccagtatactcagctccaggagtacgtgcgtctcattggtccctgg
tgtcaggtgaacatcggctcctgtcgcttcatgctgggtcagtgttacctggccaacggg
gaggggcacaaggccttgcagtgtttccaggaggcagcaacagaggtggagaaggaggag
ttcctcatcagactgacaggcaccgaggaggaggaagccgcctccacacccagattacag
tactacaacaaggtgctgcgcctgctggaggatgtcggtctgcctgagctggtcatccag
ttggcctctctggccatcacggaggccgtgagcgacatcaacagtcaggcggctctttgg
acccgaatattcaaacatcatttggacctgggacacaacagtgaagcatatgaagctctg
acccagaaccccgacagcagcatgcagcaggattgtctccgtcagctggtcgtagttctt
tgtgaacgttctcagctccaagacttggtccagttctcctacgtcaacctgcacgatgag
gtcgttggtatcattgagtctcgagcccgaggtttggaccttctggctcataactactac
gagctgctttacgcctttcacatcaacagacacaacttcaggaaagcgggttccgtgatg
tttgagttggggatgcgtctcggtcgagaggttcggacgcgtctgggtctccagaagcag
gtcaactgctacctggctgctctgaactgtctccgtctcatcagacccgagtacgcttgg
atcgtccaacccgtgtctggagccatgtacgagagaccaggagcttctccaaagaggaac
tctgatggagacttctcttctgaaccagtccaacgtcaggtcgacatcctggaactcaaa
gacctggagaaggaatacgtggtgtcacgtagccggctgaccctcgcccagcaccacccg
ccctctgctgccatcgctggaagtgcctcagcagaggagatggtgacgctgttggttcaa
acaggtttgtttgactcggctttgtccatctgtcaaaccttcaaactgaacctgacctca
gtgttcgagggtctgaccttcaagtgcattaaactgcagtttgggggggaggagactcag
aatgaagcttggagctggttggctgctaatcagctgtcttctgtcgtcaacaccaaagag
tccagtgcgacagacgaggcgtggcagctgctcgcctcttacctggacaggtacccttct
gccaacgcacgccaccaccgctgtgttatcagcaagctgctgtcacacggcgtgcctctg
cctgattggctcatcaagtcctacaaggaagtggacgctgcctctctgctgcgtctctac
ctaaactttgacctcctggatgctgcagccgagctggtgttggagtacgtggacgctctg
ctcggcagaggacaccagtactttggaatcgagagacctttgtcggccacttcttcctcc
gtgtggctcccgtacacctccatcgatcagctgctgcacaccctgaacgagacgcagacc
aacagcagcgtttataacaaagtccgagacaaactggaggattatcacaaactggtggag
cagacgaccaaacggaggctggtcactcagtga
DBGET
integrated database retrieval system
