Pungitius pungitius (ninespine stickleback): 119196162
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Entry
119196162 CDS
T07626
Symbol
slc24a1
Name
(RefSeq) sodium/potassium/calcium exchanger 1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
119196162 (slc24a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppug02000
]
119196162 (slc24a1)
Transporters [BR:
ppug02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
119196162 (slc24a1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
DUF8142
MCCD1
Motif
Other DBs
NCBI-GeneID:
119196162
NCBI-ProteinID:
XP_037307544
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All DBs
Position
6:complement(16028734..16033932)
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AA seq
711 aa
AA seq
DB search
MHCTRRKRLQLRRVLFLLSGVFLCTLYQLTIRTRLYEPVQLSQIGGDFGEGSTEGIEEET
VETRGPREPFTAKHGLEPTDQTTSEIQVAHRSDTTSDLKAMIPTESPPSPSTKRTIVHCI
YVAPEPPRQTPTPAPAPAPPAATITPASPGEAPHIKGEYPEDIFSIDDRRRGWVILHIFG
MLYMFISLAIVCDEFFVPALGVITDKLAISDDVAGATFMAAGGSAPELFTSLIGVFIAHS
NVGIGTIVGSAVFNILFVIGMCALFSREVLHLTWWPLFRDVSFYIIGLILLIIFFLDNVI
MWWESTMLMACYTLYVIFMKFNVQLEEIFKSLLLKNKNIVRIIAMEEPEKTNVEAEDNAK
PAPEDKNLLKLKPSLQRGGSSTSLHNSTMRNTIFQLMIHTLDPLGEGKFVDKAETLKDVA
RRTAESKTQDKSEDGGGKTEPVKEPQAAAAAETQKTEQLEDKKEDVPAGDDGSGGSSSSE
GSDEDSDESSEGDEDDEDEDEGENEDEPLSLEWPDTQRKQATFLFLLPIIFPLWLTVPDV
RNQKSRKLFAFTFLGSILWIAVFSYLMMWWAHQVGETIGISEEIMGLTILAAGTSIPDLI
TSVIVARKGLGDMAVSSSVGSNIFDITVGLPVPWLLFSCFNDFAPVPVSSNGLFCAIVLL
FIMLLFVIMSIAVCKWKMNKLLGFSMFLLYFIFLVLSVMLEDRIIICPISI
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtacgagaaggaagcgactgcagctgcgccgggtcttgtttctgctttccggg
gtttttctctgtaccctgtaccagctgaccatccgtaccagactgtacgagccggtacaa
ttgtctcaaattggaggagattttggggaaggttcaactgagggtattgaagaggagaca
gtggagactcgggggccgcgggaacctttcactgccaagcatggattggagcccacagac
caaacaacgtccgagatacaggtggcacatcgctctgatacaacctcagatttgaaagcc
atgatcccaactgaatctcctccatcaccgagtacaaagcggactattgtgcattgcatc
tacgtggcccccgagcccccgcggcagacacccacaccagcaccagctccagctcctccc
gcggccaccatcactccagcttctcctggtgaagctcctcacataaagggcgaataccct
gaagatattttttccattgatgaccgtcgacgaggttgggtgattctccacatcttcggg
atgttgtacatgttcatttcacttgcgattgtgtgcgatgagttttttgttcctgcgctg
ggggtaatcacagacaagttagccatctctgacgatgtagcgggagccaccttcatggcc
gccgggggctcggcccctgagcttttcacatccttgattggagtcttcattgcccacagc
aatgtgggtattggcacaatcgttggttcggcagtgttcaacattttatttgtgattgga
atgtgtgctttgttttcacgggaggtccttcatctaacctggtggccacttttccgagac
gtatccttctacataattggcctcatcttactcatcatcttctttttggacaatgtcatt
atgtggtgggagagcacgatgctcatggcctgttacactctctatgtgatttttatgaag
ttcaatgtgcaactggaggagatcttcaagtccctactcctcaaaaacaagaacattgtc
agaattattgctatggaagagcctgaaaagacaaatgtggaggctgaagataatgccaaa
cctgctccagaggacaagaatctgttaaagttgaagccctcccttcagcgagggggaagc
tcaacttccttacacaacagcaccatgagaaacaccatcttccaactcatgattcacaca
ctagaccctttaggagaggggaaatttgtggataaggctgagactctcaaagatgttgct
agacggaccgcagagagcaaaactcaagacaaaagtgaagacggtggaggtaaaactgag
ccagtcaaagagccacaggctgctgcagccgcggagacacagaagacggagcaactagag
gacaagaaggaggatgttccagcaggagacgatgggtctgggggctccagcagcagtgaa
ggtagcgatgaagacagcgatgagtccagtgaaggcgatgaggatgatgaagatgaagat
gaaggcgagaacgaggatgaacctctgtctctagagtggcctgacacacaacgtaaacaa
gccaccttcctcttcctgctcccaataatcttccctctgtggctcacagttccagatgtt
cgtaaccagaaatccagaaaattattcgccttcaccttcctgggctcaattctgtggatt
gcggttttctcctacctcatgatgtggtgggcccatcaggtgggtgagaccatcggcatc
tcggaggagatcatgggtcttaccatcctcgctgcaggcacgtccatccctgacctcatt
accagtgtgatagtggcgcgcaaaggcctgggggacatggctgtgtccagctctgtgggc
agtaacatcttcgacatcacagtgggccttccagtgccctggctcctgttctcatgcttc
aacgattttgctccagtgcctgtcagcagcaacgggctcttctgtgctattgtgctgctc
ttcatcatgctcctctttgtcatcatgtccatagcagtctgtaagtggaagatgaataag
ctgttgggtttctctatgttcctgctctactttatctttctggtgctaagcgtgatgctg
gaggatcgcatcattatctgcccaatttccatctga
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