KEGG   Pungitius pungitius (ninespine stickleback): 119196200
Entry
119196200         CDS       T07626                                 
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4 isoform X1
  KO
K06245  laminin, beta 4
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug04510  Focal adhesion
ppug04512  ECM-receptor interaction
ppug04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    119196200 (lamb4)
   04518 Integrin signaling
    119196200 (lamb4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    119196200 (lamb4)
SSDB
Motif
Pfam: EGF_laminin Laminin_N EGF_LMN_ATRN LAMININ_IV_B LAMB4 LAMB1 F5_F8_type_C 2OG-Fe_Oxy_2
Other DBs
NCBI-GeneID: 119196200
NCBI-ProteinID: XP_037307615
LinkDB
Position
6:complement(22554430..22581570)
AA seq 1787 aa
MIFIFFIIFLPGVRHQESQKDPCLDAFCNPQLGDLMVGRSTQLSATSTCGLDGPQNYCII
GYLEGEQKCFTCDSRLPYDRYGNADSHRIENIITTFDPEGKTKWWQSENGVHEVSIQLDL
ETVFQFSHLVLTFKSFRPAAMLVERSKDFGQNWKVIRYFAEDCSLWFPSVSKRPAGSIDD
VVCDSRYSGSDPSTNGEVVLKALDPIFELGNPYATNIQDLITVTNIRVNFTGLFTLGDTL
LGRRRRNPQDKYYYALYNMVVKGHCFCNGHASRCTPVDGRRGDVFAQTAMIHGRCVCQHN
TAGENCERCQDFHHDSPWRPGWENPANTCRRCNCNGHSDACHFDASRFEATGGLSGGICE
DCRHHRMGSQCESCGPFHYQDPQRATDDPQACIPCDCDPVGSEGGGLCDALTGRCVCKQN
VGGPRCDECKVGFFSLREDNLAGCEVCRCHVLGSLGSCDKLTGNCVCDHLASGPQCDQCL
AGFWGLGTSGFRCSPCDCDPGGAHSNMCSPQDGQCHCLPNMGGQRCSDPAPGFFLPSLDY
FLYEAELAAPLHSGSSSFPTTTPPPSSSRLVDPVVVPQCKKYYREQGYDFNYTNGRVILV
RRTRRFAIHRRRRQQNSLPLDPGHALQIIPRQRNDYQSLTWTGLGLVRVLDGAGLRFTVD
NLPSSLDYQLVIHYEPESSSDWLASVSIIEATPGDAGCRSDPTGSKSLPLPGRSRRGVLD
SPVCLTRGSRYFVDVVFNKHSGSDGFDAHILVDSIGLIPSIEAVQDFCSQRDVESLRHFH
CIGLAVELQPEESLPKVCEGITKSLSAQIHNGALPCRCNPDGSVGPLCSEVGGFCECKPN
VIGRCCDTCATLTFGFGPDGCKPCECDPRGSLSELCEQVRGQCVCRSELTGRRCDRCHTA
FWDFPSCRPCECNNLSDVCDEHTGECLNCREHATGDMCERCVEGYYGNPVSGQPCQPCLC
PEVPNSKQFFATSCKQDPQSLTLICKCREGHTGPRCDRCSPGFYGNLELPGNSCKQCPCN
NNINPGDRDACNSLTGECQRCLYNTMGPRCQDCKPGYYGDAMGQACKECACDRRGTVVTQ
CPLGSPCFCNSKTGQCPCRTGVLGILCDECADGYWNLEGASGCQACSCDFVNSFSNICNK
VTGQCPCRPEFGGRQCDECGENHFGNPDLQCISCDCNVEGTERPSCHPETGECICRVGVF
GIFCDECAPGYNSEFPACNECHPCTALWTGDVTDVQRTAVRIRTFLPPNGYGNMLPDHLQ
QMLNMHSELESLAELKGLSHPKLEKLEKLCAKMRKLKDGIDPNVILIDPSPLLNTEINLI
RLEFKNLVAKVKAKLIENSENKVEYPEERLDEIQKLHEVFMLDEMRVRNGNKAVEDSKDT
RQEVKHELSMCSSKGDMVPLEKKIQQLSMVHLKKMICGGPGVEGCSGCGEALCGEMKCGG
PNCEGVLPISQKAVGTADRAKERLITLSSSMELSKNKINDAQRQAQDTRDQGKNLHDCVK
KNMDSVKSEKNKTKGLIQQVKDYLIDDMVPPEDIDKMAKAVLDMQLPKSPDQIRSMINDI
NNLLSNATTSPKNLDNHTKDAQTLVYKAQEVKEWTRNIHVKEISRDIYKAEEAQSKANNN
LDTGSQDKDVAKDRIKDIKNQLDNIEAKLMSPLPESLKDKIDALRRTTEHNRDTARRAQE
AADSAFQQTTDTELELGDMIRLFELLKQKTSNQTAAERLTKLMEEAEKIKEQVEERLLQL
FDMEEKIQQLIQNKEDKESEVAMLLKIVDSLQQEIAKRAEGYSICTS
NT seq 5364 nt   +upstreamnt  +downstreamnt
atgatcttcatcttcttcattatctttcttccaggagttcgacaccaggagtcccagaag
gacccgtgcctcgatgccttctgtaatccacagctcggtgacttaatggtgggtcgatcg
actcagttgtcggccacttccacctgtggtctggatggaccacagaactactgcatcatt
ggatacctggagggggagcagaaatgttttacatgtgactctcgtctgccctacgatcgc
tatggcaatgctgacagccaccgcattgagaatatcatcacaacctttgaccctgaagga
aaaacaaagtggtggcagtctgagaatggagttcatgaggtcagcatccagcttgatctg
gagacagtgtttcagttcagtcatctggtcctcaccttcaagagtttccgtccggcggcc
atgttggtggagcgatcaaaagattttggacaaaactggaaggtcattcgttactttgca
gaagattgttcattgtggttcccttcggtttccaagaggccagctggtagcatcgatgac
gttgtctgtgacagcagatactccggatcagatccatccaccaatggagaggtggtgctg
aaagctctcgatcctatctttgaattaggaaacccatatgcaacaaatatccaagatcta
atcacagtgacaaatatccgggttaacttcactggtctcttcacgttgggcgacactctg
ctgggtcgaagacgcaggaaccctcaggacaaatattactacgctctttacaacatggtg
gtcaaaggccactgcttctgtaatggacatgccagccggtgcacacctgtggacggaaga
cgaggagacgtcttcgcccagaccgccatgattcacggcagatgtgtttgtcagcataac
acagctggagagaactgcgagagatgtcaggactttcaccacgactccccctggaggcct
ggatgggaaaaccctgccaacacctgcaggagatgcaactgcaacggtcactcggacgct
tgtcacttcgatgcttctcgttttgaagcgacaggcgggctgagcggcggcatatgtgag
gactgccgacatcacaggatgggttctcagtgtgagagctgtgggccatttcactatcag
gatcctcagagggcaacagacgacccacaagcctgcataccttgtgactgcgacccagtc
ggttcggagggaggtggattgtgtgacgctctgaccggccgatgtgtctgtaaacaaaac
gtgggcggtccccgctgcgatgaatgcaaagtcggcttcttcagtttgagagaggacaac
cttgccggctgtgaggtgtgcaggtgccatgttttgggaagtcttggctcatgtgataag
ctgacaggaaattgtgtctgtgaccatttggccagtggccctcagtgtgatcaatgtctg
gccggtttctggggtttagggacctcggggttcagatgttcaccttgtgactgtgatcct
ggaggcgctcacagcaacatgtgttctccacaggatggacagtgtcactgtttacccaac
atgggggggcagcgctgctctgaccctgcccctggcttcttcttaccttcactggactac
ttcttgtatgaggcggagctcgctgcaccgctgcatagtggaagctcttcttttcctact
actactccaccaccgtcatcatctcgtctggtagatcctgttgttgtacctcagtgtaag
aagtattatagagagcaaggttacgactttaactacactaacgggagagtcattctggtt
cggaggactcggcgcttcgccatccacagaagacggcgacagcagaacagtcttcctctg
gacccgggtcatgccctgcagatcattccacgtcagaggaatgattatcaatctctcact
tggactggattgggattggtcagagtgttggatggggccgggcttaggttcactgtggac
aacctcccatcatctctggattaccagctggtaattcattatgagccagagtcttcgtct
gattggcttgcttcagtcagcatcatcgaggcgacaccgggcgatgccggctgcagaagt
gacccaacaggaagtaaaagtctgcctcttcctggaagatccagaagaggggttctggac
tctccagtgtgtctaaccagaggcagtcggtactttgtcgacgtggtctttaacaaacat
tctggatcagatgggttcgacgcacacatactagttgactcgatcggtctgattccaagc
atcgaggctgttcaagatttctgctcccagagagacgttgaatccttacgtcattttcac
tgcattggattggctgttgaactccaaccggaggagtcactgccaaaagtttgtgaggga
atcacaaagagcctttcggcacagatacacaatggagctctcccttgcagatgtaatcct
gatggctctgtcgggccgctctgcagtgaagtgggagggttctgtgaatgtaaacccaac
gtgattggccgttgctgtgatacctgtgcaacattgacgtttggttttggtcctgatggt
tgcaaaccatgtgagtgtgacccccggggatccctgtcagagctttgcgagcaggtcaga
ggtcaatgtgtttgtcggtcagagttgactggtcgacgttgtgatcgctgccacacggcc
ttctgggatttcccttcctgtcgaccatgtgaatgtaacaacctgtcagatgtgtgtgat
gaacacactggagagtgccttaactgcagggagcacgccacgggagatatgtgtgaaaga
tgtgtcgagggttactatggtaacccggtctccggacagccatgtcagccctgcctgtgt
ccagaagtcccaaacagtaaacaattctttgctacttcatgcaaacaagacccacaatcc
ctcactctcatctgtaaatgcagggagggacacacaggtcctcgctgtgacagatgcagt
cccggtttctatggcaatcttgagttgccagggaacagttgtaagcagtgtccctgcaac
aacaacatcaacccaggggaccgcgatgcatgcaacagcctgactggagaatgtcagcgc
tgcctctacaacacgatgggaccacggtgccaggactgcaaacctggatactacggcgac
gccatgggccaagcatgcaaagagtgcgcctgtgaccggcgggggacggtggtgactcag
tgtcctcttgggagtccttgtttctgtaactcaaagacgggacagtgtccctgcaggaca
ggggtgcttggcatcctttgtgacgagtgtgcagatggatactggaacctggagggagca
tctgggtgtcaggcctgcagctgtgactttgttaactccttctccaacatctgcaacaag
gtgacgggacagtgtccatgtcgtcctgagtttggaggaaggcagtgtgacgaatgtgga
gaaaatcattttgggaatccagacctgcagtgtatctcttgtgactgtaacgttgaggga
actgagcgtccgtcatgtcaccctgaaaccggcgagtgcatctgtcgggtcggagtcttc
ggtatcttctgtgatgagtgcgccccaggatataactcagagttcccggcatgcaacgag
tgccacccctgcaccgctctgtggactggagacgtgactgatgtgcagcgaactgccgtg
aggataagaacgttcctgcctcctaatggctatggcaacatgttgcccgaccatctacaa
caaatgctgaatatgcactccgagttggaaagcctcgccgaactgaagggactctctcat
ccaaagctggagaagctggagaaactatgtgcaaaaatgaggaagctgaaagacggcata
gacccaaatgtgatccttattgacccgtcccctctccttaacactgaaatcaacctcatt
cgtctggagttcaagaacctggttgccaaagtaaaagcgaaactcatcgagaactcggaa
aacaaagttgaatacccggaagaacggctggatgaaatccagaagcttcatgaagtcttt
atgttggatgagatgagagtgagaaatggcaacaaagccgtcgaggactcaaaggacacc
aggcaggaagttaaacatgaattgagcatgtgcagcagcaaaggagacatggtgccactg
gaaaagaagatccaacagctaagcatggtccatctaaaaaaaatgatctgtggaggacca
ggcgtggagggctgttctggatgtggtgaagctctgtgtggagaaatgaaatgtggaggt
ccaaactgtgaaggagtccttccaatcagtcagaaagctgtaggtacagcagatagagca
aaggagcgtctcatcacactctcatccagtatggagttgtcaaagaacaagatcaatgat
gcacagcgacaagctcaggacaccagagaccagggaaaaaacctccatgattgtgtcaag
aaaaacatggactctgtcaagagtgagaaaaataaaaccaaagggctcatccagcaagtc
aaagactacctaatagatgacatggttcctcctgaggatattgacaaaatggccaaagct
gttctggatatgcagctgccaaaatcaccagatcagatccgatcaatgatcaatgacatc
aataatctgctgtccaatgcgaccacttccccaaagaacctggacaatcacaccaaggat
gcccagactctcgtgtacaaagctcaggaagtcaaggagtggacaagaaacattcatgtg
aaagagatcagcagagatatttataaagcagaggaagctcagtccaaagccaacaacaac
ctggacacaggcagccaagacaaagacgtggcaaaagaccgaatcaaagacattaaaaac
caactagacaacatcgaggcaaagctgatgagtcctctacctgaaagtttgaaggacaag
atcgatgcactgaggaggacaactgaacacaacagagacacggccagaagggcccaagag
gctgcagattctgctttccaacagactactgacacagaactagagttgggtgacatgata
aggctgtttgagcttttaaagcagaagacatccaatcagacggcggcagaacgactgaca
aagttgatggaagaggccgagaagataaaggaacaggtggaggaaagactcctacagcta
ttcgatatggaggagaagatccagcagttgatccagaataaagaagacaaagaatctgaa
gttgccatgttgttaaaaattgtggattcacttcaacaggagattgctaaacgagccgag
ggatactccatctgtacctcctaa

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