Pungitius pungitius (ninespine stickleback): 119196207
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Entry
119196207 CDS
T07626
Symbol
irx5b
Name
(RefSeq) iroquois-class homeodomain protein IRX-5b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119196207 (irx5b)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
119196207 (irx5b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
119196207
NCBI-ProteinID:
XP_037307634
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Position
6:22407669..22411477
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AA seq
370 aa
AA seq
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MSFRGFIFPPSVSLSLSSCPSFGTGVLLGPRQEELGRSTSGSAFAPYSGSGSSPGFSSHL
PYGGSFERPGCDPSSGAALDHHPSTPLGALGPYAYGEASYRKNATRDATATLKTWLNEHR
KNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNRSEDEEDEDVELE
RNHEDDETAKVSEEPEEPETRSQAASVGTPCVLLFREDSGSSSDTDRSFTDPDFKNSGDP
RLALVPGPASTGRPPQSASMGSVPAPQPQRKELVDSIRGPNPKPKLWSLAEIATSSDKQK
APSDTSQTQFPHSRHLYYTTSPFLPGYPSFGSLGVPQGSSHLNGLHHTMLQRARVSTVQN
LLDLHELKRS
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcggggtttcattttcccgccgtccgtgtctctgtccctgagctcttgcccg
tccttcggtaccggggttctgttgggaccaaggcaggaggagctgggtcggtccacttcg
ggatcagctttcgctccgtactccggatccgggtcctctcccggtttcagctcgcacctc
ccgtacggcggctcctttgagcgtcccggctgcgatccgtcctctggggccgctctggac
caccacccgtccacccccctcggggccctggggccctacgcctacggagaagcgtcttac
cggaagaacgcaacacgggacgccacggccacgctgaagacctggctcaacgagcaccgg
aagaacccctaccccaccaagggggagaagatcatgctggccatcatcaccaagatgacg
ctcactcaggtctccacctggttcgccaacgcacgccggaggctgaagaaggagaacaag
atgacctggacccccaggaatcggagcgaggacgaggaggacgaggacgtcgagctggag
aggaaccacgaagacgacgagaccgccaaggtcagcgaggagcccgaggagcccgagacc
aggagccaggctgcctctgtggggaccccctgcgttttgctgtttcgtgaggacagcggc
agcagcagcgacacggaccgaagcttcaccgatccggacttcaagaactcgggggaccca
aggctggccctcgtcccgggccccgcttcgacagggcgccccccccagagcgcctccatg
gggtcagtcccagctccgcagccgcagcgtaaagaactcgtggactcgatccgggggcca
aaccctaaacccaaattgtggtctttggctgagatcgccacctcttcagataagcaaaaa
gcacccagcgacacgtctcagacccagttcccacacagccgacatctctactacaccacc
tcccccttcctccctgggtaccccagctttggctccctgggggtccctcaggggagctca
cacctgaatggattacaccacacgatgctgcagagggccagagtctcaacagtccagaac
ctgctggacctgcatgagctgaagagaagctga
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