Pungitius pungitius (ninespine stickleback): 119196244
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Entry
119196244 CDS
T07626
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119196244
Cell adhesion molecules [BR:
ppug04515
]
Cadherins
Cadherin related
119196244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
Cadherin_CELSR2_9th
Cadherin_pro
EGF
hEGF
Big_9
EGF_2
EGF_Hmr-1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
119196244
NCBI-ProteinID:
XP_037307678
LinkDB
All DBs
Position
6:complement(2833247..2913035)
Genome browser
AA seq
2909 aa
AA seq
DB search
MIWGVLLCCLLTPADGHHARERLPFFHGHVFENSPAASKVSGLSIPVRRINAQKWCPASG
IHFKLYGNGSDDFRAFAHHKLGNVMLKTSRVLDREARSDYLLSLGLCCRTRASESAVFEV
ASVKVDVLDANDHAPTFGGADAVHITLDDTTALRSVVYRLEAVDADSGNNAELTYISIPR
NGSFYVVPKTGEVLLVDSLLGLRSKVKFYVFARDHGWPPLTSKGVLVTVAPQRWATRPTE
LAGPGRGGRSPRALLDPGAVVSLNVSEDASIGSVITSLSPTRFASAAFEVVYPESESSPV
TVGRDSGDIMISRRLDRETGPFLELNVKIQDKRGPDWYLNKVKLKITDVNDNVPEWNMKP
YPYLAVVSPEAPARTFVYQLQAQDGDEGKSGEVEYFLSDGGDGCFAVDKKTGQVGTTGLA
LQRDREYLLSVVALDGLGSRSAPAMLSVVAGARAPQFTNTTYAIAIPENTPEGQPFVVVF
ALSFQQQPISYSLLINPSSLFSIRQETGEISLTRTLDYESDQRRYLLMVRASEEPGSLST
ATEVQVLITDENDCVPEFLQSIYSVDGVPETVTTATSLLQVLATDCDSGSNAELTYYTLS
PDFSISPHGTVFPAGRLDYERPNHVYEFVVMATDQGDEPHSGTATVRVRMANTNDEAPEF
SQPVYRTFVSEDAGPNTLVATVLAKDPDGDGISYSITAGNEEGNFVIDSQKGLIRLRSAP
LPELQGLEYVLNVTATDDNASGGLQPLVSTARVIVGVDDVNNNKPVFEECQQYREQASVL
ENQSTGTFVLQVHAKDADEGANGKVKYGLMHRDSTMPAFRIHPDTGVIATARRFDRERQR
EYSITVTATDRAEEPLIGICQLTVQILDQNDNSPKFENLRYEYFLREDTLVGTSFLRVAA
HDDDFGTNAAITYSMSLEQPEYLQVNPVTGWIYVNQPISQRTYITRDIIATDGGAQNTSV
ELAVTITNVKNQPPQWEKESYSVVIPENAARDTPIVTIKATSQLGDPRVTYNLEDGMVPE
TNMPVRFYLSPNRDDSSASILVSEPLDYETTPVFSLRVRAQNVAAVPLAAFTTVYVNVTD
VNDNVPFFTSSIYEASVTEGAQIGTLVLQVSANDKDLGLNGEITYSLLSDSSGDHHLFCV
DPKLGLIYTEAVFDREARSSYLLEVQSVDGQESARPGKNKQPNSDTAYVRVFISDVNDNK
PVFAQRLYEVGVDEDADVGLAVVTVSANDEDEGANAKLRYQITSGNKGGVFDIEPEVGTI
FIAQPLDYEEQKRYKLLVLASDGKWEDYAAVVVTVVNKNDEAPVFSMNEYYGSITEELDG
SPVFVLQVTATDPDKDADQGAIRYSIHGQGAESHFMINDITGEMYAQRTMDREERAVWRF
VVMATDEEGEGLTGFTDVIINVWDINDNAPAFTCAPDNCHSSVAENSPPGTFVVEMTAVD
RDDAAVGQNAILTYRISENVHMDNNAGLFNIDSSTGTLSLAAGGLDREFADSHRLVVEAR
DGGGMIGTATVTVAVTDINDHVPKFKEGRCGARVPESTEEDAPILELRAVDPDAGTYGQL
AFSVVAGDAEHRFYVVSHRLEKTGTLRLKRKLDFERPGEQRFNLTLKVEDSDFSSLIHCQ
ILVEDVNDNAPVFTPSSQLLSPVPEDVTVGTSIIQVVASDSDSGPNGDILYSISPQSDPY
GHFTVSRAGLVTVAKPLDRETVAGYEVVVMATDRGNPALTGIVTVHIPLLDVNDNGPELE
TAYAPVLWENSPAPQVVWLNRSYTLLRVVDRDSSEHGPPFSLSLPPLYAVHFHLQDHGNG
SATLTALRRFDRERQSEFHLPVILVDSGDPPMTATTTLAITIGDQNDNAHQAGEKDVYVH
TRKGRLANAALGKVYAPDPDDWDNKTYTLETSAAKYFGLNQSSGVLTIKPNTPAGSYWLR
VGVSDGVWPDVFSGVRVHVRELDEKSILLSASLRLTGITAREFIDSHVEGKSRLETFWDF
LSGALSVRPASINIFSIADRKERTVDIHFYVLTDNGYLRPEKLHSVLAAHKKKLHSLLHA
NVSQVQVDECVRADCQTTGGCSTRLSIADTPTLVDSGALSLVSVKVTPSAVCGCAAREMT
HQPCSSYRINPCLNGGTCVDTQTGYRCHCPPQLEGPECQQTRLSFLGNGYAWFPPIRPCF
DSHLSLEFMTAEDDGLLLYAGPLATLLPGDREDYMAIELIGGTPSLKINHGSGTLVLQLT
NNIGVTDRRWHRLDVRSNSKEVRFTLDRCSSAIIMETEGVDSWAVTEDRSSCEIRGVTPN
RDKYLNGSPVLQIGGVNNNISYEYPQLQHTHYTGCIRNLVVDSKLYDLGSPAESSNTVAG
CSLIDDHCSNMEQLSPCGKRGRCHGQRGSFSCHCEPGFTGPQCDQGAPEFSFDGRSHIQF
HLLWSLPARRMRVQLGIRTRAASGVVLSVLSQEQSEYLRLEVIQGLLAVFYNLGDGDYNL
TLPYHPLSDGEWHEAELDRYGREFTLRLDGGGGRREVTASLGRSQEIIIDPTVVMLGNSF
PSGLNRSFLGCLRDLRFNDRSVPLGRDQPTEGLQVVTSQGVSVGCYSEACRKHHCSPPLV
CVDLWRHPECRCPPGHMTRESAAGKVCVYTLCASRPCRHGTCVAHSPSRYSCRCSEGYRG
RHCEVTLAMYHNEDSTSLSLSSMFAISICVMAFLVLMLGLFLYSCWRRHKGLKEGVYHVS
AQHGDWEDIRENVLNYDEEGGGEQDQNAFNMVELQRSLQPSPAQSLRYSYPQSIISYPPT
KPPQDDIKKGASSGNGSAAIALRLAVPPSEAETLPSPLTFRRSQRALSFSSQDLARYLCE
VIRDTEHPGELGAMTTPRRPSGKERRLAAVRSLSSLSAPQGAEVRGTRLDRFKTLRAVVS
DLRGDSRTPEGQKDKLKESRGQPNCEKSG
NT seq
8730 nt
NT seq
+upstream
nt +downstream
nt
atgatttggggtgttttgttatgctgcctcctgacgccggctgatggacaccacgcacgg
gagagactacctttctttcacgggcacgtttttgagaactccccggcggcttctaaagtg
agcggactgagcatcccggtgaggcgcatcaacgcgcaaaaatggtgcccagcgtccggg
atacacttcaaactgtacggaaacggcagcgacgatttccgcgccttcgcccaccacaag
ctgggaaatgtaatgctcaaaacttccagggttttggaccgagaggctcgctcagattac
ctgctgagcctcggtctgtgttgccggactcgcgcgtcggagtccgccgtcttcgaggtc
gcgtcggtaaaagtggacgttttggacgccaacgatcacgcaccgacctttggcggcgcg
gacgccgttcacatcactttggatgacaccacggctctccgcagcgtggtgtacaggctg
gaggctgtcgacgcggacagcggcaacaacgcggagttgacgtacatttccatccccaga
aatggcagtttctatgttgttccgaaaacgggggaagttctgctagttgactcgctgctg
gggctccgctctaaagttaaattctacgtgtttgccagagatcacgggtggcccccactg
accagcaaaggtgtcctggtgaccgtcgcgccacagcggtgggcgacgcgtcccactgaa
ttagcggggccaggaaggggaggccggtctccgagggctttacttgaccccggcgcagtg
gtttccctcaacgtgtctgaagacgccagcatcggctcggtcataacgagtctaagtccc
accaggttcgcatcagccgccttcgaggtggtttacccggagtcagagagctctccggtc
accgtggggcgcgacagtggagatatcatgataagcaggaggctggatcgggagacgggt
cctttcctggagctcaatgttaagattcaggataaacgaggcccagactggtacctgaac
aaggtgaagctgaagatcactgacgtcaacgataacgtccctgagtggaatatgaagccg
tatccttacctggctgtagtgtcccctgaggcccccgccagaacgttcgtctaccagctc
caggctcaagatggggatgagggcaaaagcggagaggtggaatactttttgtctgatggc
ggtgacggctgctttgcagtggacaagaagacgggccaggtggggaccacggggttggcg
cttcagagggatagagagtacttgttaagcgtcgtggctctcgacggcctgggcagccgc
agcgctcctgctatgctctctgtggtggcaggagcccgagcgccgcagttcaccaacacc
acctacgccatcgccatacccgaaaacacgcctgaaggacagcccttcgtggtggtgttt
gcgctttccttccagcagcagccaatcagctacagcctgctgatcaatcccagtagcctt
ttcagcatcagacaggagacgggggagatcagtctgaccaggacgctggactacgagagt
gaccagcggcgctacctgctgatggtgcgagctagcgaagagcccggcagcctcagcacc
gccacggaggttcaggtgttgataacagatgagaacgattgtgtcccagagttcctccaa
tctatctacagcgtggatggagtgcctgagactgtaaccacggcaacatccctgctgcag
gtgctcgccacggactgcgactcggggtccaacgcggagctcacctattacaccctgagc
ccggacttcagcatctcgccccacgggactgtttttcccgctggccggctggactacgag
aggcccaaccacgtgtatgaattcgtggtgatggcgacggaccagggggacgagcctcac
tctgggacagccacggtgcgcgtaaggatggcgaacaccaacgacgaggcgcctgaattc
tctcagcctgtatatcgaacgtttgtttccgaggacgcggggcccaacaccctcgtcgcc
accgttctggccaaagacccagatggagacggcataagctactccataacggcgggaaac
gaggaaggcaacttcgtcatcgacagccagaaagggctgatccgtctccgctccgctccc
ctgcccgagcttcaaggcctggagtacgtcctgaatgtaacggccacagatgacaatgca
tcaggaggcctgcagcctctcgtctccacggctcgagtcatcgtcggagttgacgacgtc
aacaacaacaaacccgtgtttgaggagtgccagcaataccgtgagcaggcttcagtgctg
gaaaatcagtctacggggacttttgtgttgcaagttcatgcgaaggatgcagatgaggga
gcgaatggaaaagtcaaatatggcttaatgcaccgagacagcaccatgcccgccttcaga
attcacccagacacaggagtgattgctacagccagacggttcgacagggagcggcagaga
gagtattcaattacagtaacggccactgatcgggcagaggagccgctcattggcatctgt
cagctcactgtccaaatactggaccagaatgataacagccccaagtttgagaatttgcgc
tatgagtacttcctgagagaagacaccttggtcgggaccagcttcctgcgcgtggcagct
cacgatgacgactttgggactaatgcagccatcacttactccatgtccctggagcagcct
gagtacctgcaggtcaaccccgtcactggatggatctacgttaaccagccaatatcacag
agaacttatatcacgcgggacatcatcgcgaccgatgggggggcacaaaacacttccgtg
gagctggcggtcaccatcaccaacgtgaagaaccagcctccacagtgggagaaggagagc
tacagcgtcgtcatcccggagaacgccgccagggacacaccgatagtgacaatcaaggcg
acctctcagctgggtgatccaagggtgacatataacctggaggatggcatggtccccgag
accaacatgcccgtccgtttttacctctcacccaaccgcgatgacagctctgcgtccatt
ctggtgtccgagccgctggactacgagaccacacccgtcttctctctccgggttcgagca
cagaacgtggctgcagtgcctctcgcagccttcactacagtttatgttaatgttacagac
gtcaatgacaacgtgccatttttcacatcctccatctacgaggcttcagtaacagaagga
gcccagatcgggactttggttctccaggtgtctgccaatgacaaggacctcggcctcaat
ggagagataacttactctctgctgagtgacagcagtggcgaccaccatctgttctgcgtg
gacccaaaacttggcctaatctacacagaagctgtgtttgatcgggaggcccgtagctcc
tatttgctggaagtccagtctgtagatggccaggaatcggcgcgacctggcaagaacaaa
cagcccaactcagacacagcgtatgtgagggttttcatcagcgacgtcaatgacaacaaa
ccagtctttgctcagcgcctgtatgaagtcggggtggacgaggatgcagatgtgggcctg
gctgttgtcaccgttagtgctaatgacgaggatgaaggagccaacgccaagctgcgctac
cagattacgtctggcaacaagggcggcgtttttgacatagaacccgaggtggggacaatc
ttcatcgcgcaaccactggactacgaggagcagaagagatacaagctactcgtcctggct
tccgacgggaagtgggaagactacgcagccgtggtggtcaccgtggttaacaagaacgac
gaggcgccagtgttctccatgaatgagtattatggctccatcacagaggagctggatggg
tcacccgtgtttgtactacaggtgacggccactgacccagacaaagacgcagaccagggc
gccatacgctactctatccacggccagggggccgagtcgcacttcatgatcaacgacatc
acgggcgagatgtacgcccagcgcaccatggaccgagaggagcgcgctgtctggcgcttt
gttgtcatggcaacggacgaagagggcgaaggactcaccggcttcacggacgtcattatt
aacgtgtgggacatcaatgacaacgcccccgccttcacgtgcgcgcccgataattgccac
agtagcgtggcggagaactctcctccgggaacgtttgtggtggaaatgacagcggttgac
cgcgacgacgcggccgttggtcagaacgcaatcctcacgtaccggattagcgagaatgtg
cacatggataacaacgcaggccttttcaacattgattccagcaccggcacgctgtctttg
gcagcggggggtctcgaccgggagtttgccgacagccacaggctggtagtggaggcccgg
gacggcgggggtatgataggtacggctaccgtcactgtggccgtgacggacatcaacgac
catgtgcccaagtttaaagagggccgctgtggtgcccgcgtgcctgagagcaccgaggaa
gacgctcctatcctggagctgcgtgctgtggaccccgacgcaggcacgtatggccagttg
gccttcagcgtggtggcaggagatgcggagcatcgattctacgtggtcagccacagactg
gagaagacgggcactctcagactgaagagaaagctggactttgagaggccgggggagcag
cggttcaatctcaccctcaaggtggaggactctgacttctccagcctcatccactgtcag
attctagtggaggatgtaaatgacaacgctcctgtgttcaccccaagctcccagctgctg
tcccctgtgcccgaggacgtaactgtgggaaccagcatcattcaagttgtggccagtgac
tccgactccggcccgaatggggacattctgtacagcatttcacctcaatctgacccatat
ggacattttacagtcagtagagccggtctggtcacggttgccaagccgctggatagggag
acagtggcgggttatgaagtggttgtcatggcgacagatcggggtaacccggcactgact
ggcattgtcacggtccacataccgctgctggacgtgaatgacaacgggccggagttggag
acggcctacgctcccgtgctgtgggagaacagcccggctccccaagtggtctggctcaac
aggagctacactctgcttcgtgttgtggacagagactcctcggagcacgggcctcccttc
tctctctcgctgcccccgctttacgccgtccacttccacctgcaggatcacggcaacggc
tccgccacgctcactgccctgcgtagattcgaccgggaaaggcagagtgaattccacctg
ccggttattctggttgacagcggtgatccaccaatgacggccactaccacactcgctatc
accattggcgaccagaatgacaacgcccatcaggcgggggagaaagatgtctacgtgcat
acccgtaagggaaggctggcaaatgcggcactggggaaggtgtatgccccagatcctgat
gactgggacaacaagacctacactctggagacaagtgcagcaaagtacttcggtctgaac
cagagctcaggagtgctgaccatcaaacccaacactccagcaggcagctactggctgagg
gtcggtgtgtctgacggagtgtggcccgacgtgttctcaggggtcagagttcatgtcagg
gagctggatgaaaagtccatcttgttgtctgcctcgctgcgtctgactggcataacagcg
agagaatttatcgactctcacgtcgaggggaagagtcgactggagacgttctgggacttc
ctgtctggcgccctgtctgtcagaccggcgagcatcaacattttcagcatagcagacagg
aaggagagaaccgtggacatccatttctatgtgctaactgataacggctacttgcgcccc
gagaaactccattctgtcctcgccgcacataaaaagaagctgcactccctgctgcatgcg
aatgtgagccaggtgcaggtagacgagtgcgtgcgcgccgactgccagacaacgggcggc
tgctccacgcgcttgagcattgctgacacgcccaccctggtggactcgggtgccttatcc
ctggtgtcagtgaaggtgacaccctcggctgtgtgtggttgcgctgccagggaaatgacc
caccagccctgctcctcctaccggattaacccctgcctgaacgggggaacctgcgtggac
acccagacgggatacaggtgccactgccccccgcagctcgaggggccagaatgtcagcag
acgaggcttagtttccttggcaacggctatgcctggtttccccccataaggccatgcttt
gatagccatctttccctggagttcatgacggcggaagacgacggactgctgctgtacgcg
ggcccattggctactctgctgcctggggatagagaggactacatggccatagaattgatt
ggtgggacacctagtctgaaaattaaccacggctcggggaccctggtcctccagttaaca
aataacattggggtgactgacagacgctggcaccgcctcgatgtgaggagcaatagcaaa
gaagtacgcttcactctggatcgatgttccagtgcaattatcatggagacagagggcgtg
gactcatgggcagtgacagaggaccgctcgtcctgtgaaatccgcggggtcacacccaac
cgggacaagtacctgaatggaagtccagtattgcagattggaggggtcaacaataacata
tcctatgaatacccacagctgcagcacacgcattacactggatgtataaggaacctagtt
gtggacagcaagctgtatgaccttggctccccagctgaatcctccaacacggtggcaggc
tgctctcttattgatgaccactgcagcaacatggagcaattgtccccctgcggcaagagg
ggtcgctgtcacggccaacggggctccttcagctgccactgtgaacctgggttcacaggg
cctcagtgcgatcaaggggctccagagttctccttcgacggccgcagccacatccagttc
cacctgctgtggtcgctgcccgcgcgtcgcatgcgcgtccagctcgggattcggacgcgc
gccgcctctggcgtcgtcctcagcgtgctctcccaggagcagagcgaatacctacgcttg
gaggtcattcagggcctgctggctgttttctacaacctgggagacggagactacaacctg
acgctgccctaccaccccctcagcgatggagagtggcacgaggcggagctagatcgctac
ggcagagagttcacgctgcgactcgacggaggtggaggacggcgagaagttacggcctcg
cttgggcggagtcaggagatcatcatcgaccccaccgtggtgatgctcggaaactctttc
ccctcggggctcaaccggagcttcctcggttgtttgagagatttacggttcaatgaccgc
tccgtgcctctgggacgggaccagcctacagaggggcttcaagtggtcacttcgcagggc
gtctctgttggctgctactccgaagcctgcaggaaacatcactgctcccctcccttagtg
tgtgtggacctctggagacaccctgagtgcaggtgccccccgggccacatgaccagagag
agcgccgcgggcaaagtgtgcgtctacacgctgtgcgccagccggccctgccgccacggc
acctgcgtggctcactcgccgtcccgctactcgtgccgctgcagcgagggctaccggggg
cgccactgcgaggtgacgctcgccatgtaccacaacgaggacagcaccagcctcagcctg
agctccatgttcgccatcagcatatgtgtcatggctttcctagtgttgatgctgggcctg
ttcctctactcctgctggaggagacacaagggcctgaaggagggcgtgtaccacgtgtcg
gcgcagcacggcgactgggaggacatccgcgaaaacgtgctcaattacgacgaggagggc
ggaggggagcaggaccagaatgccttcaacatggtggagctgcagcgctctctccagccg
agcccggcacagtccctccggtacagctacccgcaaagcatcatttcctacccgccgacc
aagcccccccaggacgacattaagaagggggcgtccagtgggaacggcagcgcagcgata
gccctgcgtctggccgtcccgccgtcagaggccgagacgctgccgtccccgctgaccttc
cgccgctcccagagggcgctctccttctccagccaggacttggcccgctacctgtgcgag
gtcatcagggacacggagcacccgggcgagctcggcgccatgaccacgccgcgccgcccc
tccgggaaggagcgcaggctggccgcggtgcgctccctgagctccctcagcgcgccgcag
ggcgcagaggtccggggcacccggctggacaggttcaaaaccctccgagccgtggtgagc
gacttgagaggagactccaggaccccggagggccagaaagacaaactgaaggagagcaga
gggcagccgaactgcgagaagagcgggtga
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integrated database retrieval system
