Pungitius pungitius (ninespine stickleback): 119196259
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Entry
119196259 CDS
T07626
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
119196259 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119196259 (myo5c)
04131 Membrane trafficking [BR:
ppug04131
]
119196259 (myo5c)
03029 Mitochondrial biogenesis [BR:
ppug03029
]
119196259 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119196259 (myo5c)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
119196259 (myo5c)
mRNA cycle factors
P-body specific factors
119196259 (myo5c)
Membrane trafficking [BR:
ppug04131
]
Others
Actin-binding proteins
Myosins
119196259 (myo5c)
Mitochondrial biogenesis [BR:
ppug03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
119196259 (myo5c)
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
119196259 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
CEP135_TSGA10_CC
CCDC89
Csm1_N
AAA_22
AAA_16
CCDC39
Myosin_N
Motif
Other DBs
NCBI-GeneID:
119196259
NCBI-ProteinID:
XP_037307694
LinkDB
All DBs
Position
6:15027300..15037197
Genome browser
AA seq
1743 aa
AA seq
DB search
MALLELYTKYNRVWIPDAEHVWKSAEITKDFNFGDNILELLLEDGSEHHLPVDPSKPQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLHVYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMPRNQKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSKTNVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEIGFDRRYRIIGANMR
TYLLEKSRVVFQADNERNYHIFYQMCSCAHLPEFKHLRLLSADEFEYTSMGGEIRIEGVD
DRKDMEETRQTFSLLGLKEDFQSDVFKVLAAILHLGNIQIRNSGDGHSSVPPGDPHLEAF
CELLSVSADGLVRWLSHRRIVLVAETVVKPVPKERAVSARDALAKQVYAHLFDCIINRIN
TALRVPGQQHAFVGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMRE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLFNYLDANPLFEKP
RLSNEAFVIQHFADKVEYQCTGFLEKNRDALYEELVDILRASKFPFIANFFQEEKQISVN
SKGIKVRPARPGVKAANKQLRTSVGDKFCSSLSLLMETLNATTPHYVRCIKPNDVKLPFE
YDSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSNQEAVLNDKKQTCKNV
LQRLIQDPNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACSTIQKHVRGWCQKRKYQRMR
EAAIVIQQYIRGKKSIRKTVSAAALKQGWATLVIQRYWRGYRMKQIFLVVRLASITIQAF
TRGWMARKRYKKMIEVQKALILQKYARAWLARRRFQTMRRLVINVQLSFRVQQLRKKVEE
QNKENRGLMERLTHLASSHSHTVERLQGLEAQLEKSNSQKASAEAREKKVKEEASLTNAQ
LQKEIDAVKLEKQNLEKRFEVSTKEAKESFDQIKRNLLEEKEYEARFRKIAENNIDIQAQ
DHEREVETLKEEIKRLKEERVTLQRQIEEGGLVNSDLQEQIVQLTKHVKVIPELRRDLNK
LQNQRNSMDRKMKQQSEQARAKMNDITRQLLGGVVEEDVVLGLTLDHSEEMNEGEDFLAS
FDGLQKAIRIQENRQKEQKESHETQVEGLNLKMDHLQNENSKLQNLFQEKSDLNENIRQE
VSRLSSENSVLPELKLQASELQRQKQELEASLEAQSRELAEKTEEITNIFQKKIQEESSQ
RRHFEEKAEDLEELKRELQGKVEELEDESNHLKRQLLMESEAKNKLRQEISQITAENMDF
EEQLDQKDRLIKKLQNQIKSLETSQKAKQTPTPAIPKDYLGMLEYKREDESRLIQNIILD
LKPKGVVVNMIPGLPAYILFMCVRHADYLNDEVKLKSLMSGIIGAVKKVIMSHRKDFELL
SFWLSNTYQLLNCLKQYSGEEEFLKQNTPRQKKNCLQNFDLSEHRQIFSDLAIQIYHQFI
SVMEKTLTPAIVPGLLEHESLQGFSSTKPTGLRKRSNSTCEDSGTHTISSVVQQLSAFHS
TMSQHGMEPGLIHQAVKQMFFLVGATTLNNIMLRKDMCSCRKGMQIRCNISYLEEWLKEK
ELQSSHAIDTLQPLSQAAWLLQVNKSTDQDAKEITDKCTELNPVQIVKILNSYTPIDDFE
KRVTSSFVRKVQSLLQDRDGSTSQLMLDSDYRFQVTFPYRPSSQALELLQVPSSLHLGFL
TRI
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttggaactgtacaccaagtacaacagagtgtggataccagatgcagaacat
gtgtggaaatcagccgaaattacgaaagactttaattttggggacaatattcttgaattg
cttcttgaagatggcagtgagcaccacctccctgttgacccgtcaaaacctcaactccct
ccgctccgcaacccggacatcttggtgggggagaacgacctcactgccctcagctacctg
cacgaacctgcagtcctgcataacctcaaagtgcgatttgtggagtccagaatcatctac
acctactgtggtatcatactggtggctgtaaatccatacaaacagcttcacgtctacgga
gatgcaatcattcatgcctactcaggccagaacatgggggacatggaccctcatatattt
gcagtagcagaagaggcttacaaacagatgcccagaaaccagaagaaccagtctatcatt
gtcagtggtgaatccggagcgggcaaaacggtgtctgctcggtacgccatgaggtacttt
gctgttgtgagcaaatctggaagtaaaactaacgttgaagacaaagtcctggcgtccaat
ccgataacagaggcaattggaaacgcaaagaccaccaggaacgacaacagcagccgtttt
gggaaatacacagagatcggctttgacaggaggtaccggatcatcggagcgaacatgagg
acatatctcttggagaaatccagagttgtctttcaggcagacaacgagcgaaactatcac
atattctaccagatgtgttcttgtgctcacctgccagaattcaagcatctgaggctgttg
agtgcggatgagtttgagtacacctcaatgggcggagagatccgtatcgaaggtgtggat
gacaggaaagacatggaggagacccggcagaccttctcactgctggggttgaaggaggac
tttcagtcggatgtgttcaaagttttggctgccattttgcacttgggaaacattcaaatc
cgaaactctggagatggacattcctcagttccccccggtgatccacacctggaggccttc
tgtgagctgctgagcgtgagtgcggacgggctggtccggtggctgagccatcgcaggatc
gtcctggtggccgagacggtggtgaagccggtgcccaaagagcgggccgtaagcgccaga
gatgccctcgccaagcaggtctatgcccatctgtttgactgcatcatcaacaggataaac
actgcgctgcgggttccaggacagcaacacgccttcgttggtgtgctggacatttatggc
tttgaaacgtttgacgtcaacagctttgaacagttttgtatcaactacgcgaatgagaag
cttcaacagcagtttaacttgcatgtgttcaagctggagcaggaggagtacatgagagag
gacattccatggacgttgatagatttctacgacaatcagccggtcattgatctgattgaa
gccaagatggggatcctggacttgcttgatgaagagtgtttgtttcctcaggggaccgat
cagagctggctgcaaaagctgttcaactacctggatgccaatcctctgtttgagaagccc
aggttatcaaacgaggcatttgtcattcaacactttgcagacaaggtggaatatcaatgt
acaggttttcttgaaaagaacagagacgctctatatgaagaattggttgacattttgaga
gccagtaagtttccttttatagccaacttcttccaagaggagaagcaaatctctgtgaac
agtaaaggtatcaaagtgagacctgccagacccggagtgaaggcagctaacaaacagttg
agaacctcagtgggagataagttctgcagctccctctctttactgatggaaacactgaat
gccaccacccctcactatgttcgctgcattaagcccaatgacgtaaagctcccgtttgaa
tatgactccaggagggtggtgcagcagttgcgagcatgtggagtccttgaaactattcgc
atcagtgctcagagctatccatccaggtggacatacattgagttttatagccgttacagt
atcctgatgtcaaaccaggaggcggtcctcaatgataagaaacagacctgcaagaacgtc
ttgcagaggttaattcaggaccccaaccagtacaagtttggtcggacaaagatctttttc
cgagccggtcaagtagcttatctggagaagctgcgtctggaccggctgagaggagcctgc
tctacaatccagaaacatgtccgtgggtggtgccagaagaggaagtaccagcgcatgaga
gaggctgccatcgtcatccaacagtacatccggggaaagaagtccatccgtaaaacagtg
agtgctgcagcactgaagcagggctgggccacgctggtgatccagagatactggagaggt
taccgcatgaaacagatcttcctggtggtccgtctggcttccatcaccatccaggccttc
acgcgaggttggatggcccgtaaacggtacaagaagatgatcgaggtgcagaaagccctc
attctgcagaagtatgccagagcatggctggcacgccggcgttttcaaaccatgcgtcgg
ctggtgatcaacgttcagctctccttcagagttcagcagctcagaaagaaggttgaagag
cagaacaaagagaaccgtggattgatggaaagactgacacacttggccagctcacactct
cataccgtggaacggcttcagggtttggaggcacagttggaaaaatcaaacagccagaaa
gcctctgcggaggcgagagagaagaaagtcaaagaagaagcaagtctgacaaatgcacaa
cttcagaaggaaatagatgcagtaaagctcgaaaagcagaacttggagaaaaggtttgaa
gtttccaccaaagaggccaaagagagctttgatcagataaagaggaacctcctggaagag
aaagagtatgaagcaaggtttagaaaaattgcagagaacaacattgacatccaggcacag
gaccatgaaagggaggtggaaactctgaaagaggagattaagagactgaaagaagagaga
gtcaccctgcagagacagatcgaggagggaggcctggtgaactctgacctgcaggagcag
atcgtccagctcaccaaacacgtcaaggtcattccggagctccgcagagatctcaataaa
ctgcaaaaccagaggaacagcatggaccgaaagatgaagcaacagtcagaacaagcaaga
gctaaaatgaacgatattacgagacaacttcttggcggtgtggttgaggaggacgttgtt
ttggggctgactctagaccactctgaggagatgaatgaaggtgaagattttctggcttcc
tttgatggtctacagaaagcgatcagaatacaagaaaaccggcagaaggagcagaaggaa
agccacgagacgcaagtggagggcttaaacttgaagatggaccaccttcaaaatgagaac
agcaagttgcagaacctgttccaggagaaaagtgacctcaacgagaacattcgccaggaa
gtgtccagactcagcagcgagaactcagttttaccggagctgaagctgcaggcttcagag
ctgcagagacaaaagcaagaattggaggcctccctagaggcgcagagcagagagctagca
gaaaaaactgaggagatcacaaacatttttcaaaagaagattcaagaagaaagctcccaa
cgcagacactttgaggaaaaagctgaagatctggaggagctgaagagggagcttcaaggc
aaagtggaggagctggaagacgagagtaatcatttgaagagacagctgctgatggagagc
gaggccaagaacaaactgagacaggagatttcacagataaccgctgagaatatggacttt
gaagagcagcttgaccagaaagacagactaataaagaaacttcagaatcagataaagagc
cttgaaacatcacagaaagccaagcaaacgcccacacctgctattcctaaagattacctc
ggaatgttggagtacaagagagaggatgaatccaggctcattcaaaatatcattctggac
ctgaagcccaaaggtgtggtggtcaacatgattcccgggctgccagcgtacatcctcttc
atgtgcgtccgccatgccgactacctgaacgatgaagtcaaactgaagtctctcatgagc
ggcatcatcggggcggtcaaaaaggtcatcatgagtcatcgcaaagactttgagttgctg
tcattttggctctcaaacacgtatcagctgctcaactgtctgaaacagtacagcggggag
gaggagttcctgaaacaaaatactcctcgacagaaaaagaactgcttgcagaattttgat
ttgtctgaacacagacagattttcagtgacctggccatccaaatctaccaccagttcatc
tccgtcatggaaaagactctaactcctgccattgtgcccggattgttggagcacgagagc
ttacaggggttttccagcacgaagccgacgggcctcaggaagcgctccaacagcacctgc
gaggactccgggacgcacaccatctcctcagtggttcagcagctcagcgccttccactcc
accatgagccagcacggcatggagccggggctcatccaccaggccgtcaagcaaatgttc
ttcctggtcggcgccaccaccctcaacaacatcatgctccgcaaagacatgtgctcctgc
aggaagggaatgcaaatcaggtgtaacatcagttacctggaggaatggctgaaggagaag
gagctgcaaagctctcatgctatagatactctgcagccgttgtctcaggccgcctggcta
ctgcaagtcaacaagtccactgaccaagacgccaaagagatcactgacaaatgcaccgag
ctcaaccccgttcagattgtgaagattttaaactcctacactcccattgatgattttgag
aaaagggtgacatcgtcatttgttcgcaaagttcagtctttactgcaagatcgggacggg
tccacctcacagctgatgctcgactcggactatcggttccaggtcacgtttccttaccgc
ccgtcctcgcaggctctggagctgctgcaggtcccgagcagccttcacctgggctttcta
accaggatctga
DBGET
integrated database retrieval system
