Pungitius pungitius (ninespine stickleback): 119196261
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Entry
119196261 CDS
T07626
Symbol
ap4e1
Name
(RefSeq) AP-4 complex subunit epsilon-1
KO
K12400
AP-4 complex subunit epsilon-1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
119196261 (ap4e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119196261 (ap4e1)
Membrane trafficking [BR:
ppug04131
]
Endosome - Golgi transport
Others
AP-4 complex
119196261 (ap4e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP4E_app_platf
Cnd1
INTS1_R4
HEAT_EZ
Coatomer_b_Cpla
Motif
Other DBs
NCBI-GeneID:
119196261
NCBI-ProteinID:
XP_037307696
LinkDB
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Position
6:15043037..15051736
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AA seq
1133 aa
AA seq
DB search
MSDVVEKTLTALPSLLSLDSHSGSTKLSSSSKLGNLIRGITELTSKHEEEKLIQRELASI
KEQVSSPNTSMRQMKELMVRAIYCEMLGYEASFSYIHAIKLAQQGTALEKRVGYLAVSLF
LNESHELLLLLVNTVLKDLQSTNLIEVCMALTVVSQMFPKDMIPAILPLVEEKLNHPKEI
IRRKAVLALYKFYLIAPNQVQHIHNKFRKALCDKDPGVMTASLHIYLQMIQENPEGYKDL
TASFVTILKQVVGGKLPMDFNYHSVPAPWLQIQLLRILAFLGKNDQSTSEIMYDILDESL
RRAEINHNITYAILYECVKCIYTIHPKSELLEKAAKCIGNFVLSTKINLKYLGLKALTYV
VQQDPKLALQHQVTIIECLDHPDLIIKRETLELLFRITNAQNVTVIVEKMLEFLRVNKDD
YTTIDLVGKVAELAEKYAPNNEWFIETMSTVFSVGGDTLQPDIPNSFLKLLSEGFDSVED
DRKLRLFAVDSYVSMLQGEPGKLPQRFLQVISWVLGEYSYLRGELEAATVLKLLAKLLDM
KSTSSETKNWVLMAMTKVCEGRVGVSVAQEVCETYSSCLDTALRQRAQELQHLSQDPDLR
AKVLPRDAGPEPLEVDSSLSFLDGFVSEALAAGAAPYKPQHQRQEELAQAKALSMEPYGL
PISMSSCSIADRQSPTLLSVSSGLSGDSPDLCQKGGSTTLKLDGVKRVWGRQGYLVQREP
VEEPDLVEVTGPLQSPNQHGGAEGPPSQTPTPNPTPQPEQEKQQLASSLFVGLGSQSSLC
LMGKSELTTQRFRRKAKGPVLSSGTSEQISNSFVSGSSVANNLLCNNLLDSNITSETAVP
SLEQTSQTSHGATAANGACDVESTDSDMKENCPSVIRDNGLVAAAPAPREGRDKLKDLST
HLPAEFSGLCHSEISPLASNQSLDVSACHVQKEDSLALVVFMYNSSDSDIPHILLELHSE
ELEVSCDCDSPGQEARSHSVAVRQYSLTVKKPSVHVEVVGVVSYQLPVGTSQSVQFSYKL
PLASFIRPLTVSTEEYGTMWLDFSHDTKQKLTPITVGQEPLMDTLNVLKKKLKLHVVEII
GMEGIVACQVLRDQPCLMHCRLHAGTLSVWLRSPVPDLPDCLMYHCQRALQEH
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgtggtggaaaagaccctgacagctctgccgagtctgctgtctttagactct
cactctggatctacaaaactgtcctcctcctcaaaactgggaaacctcatcagagggatc
accgagttgacgtccaaacatgaagaggaaaaacttattcaacgtgaactagcctctatc
aaagagcaggtgtcctctccaaacacctccatgaggcagatgaaggagctcatggtgaga
gcaatctactgtgaaatgctgggttatgaggcttcgttcagctatattcatgccatcaaa
ctcgctcaacaaggcactgctctggagaaaagagtcggctacctcgccgtctctttgttt
ctcaacgaaagtcacgagctgcttcttctccttgtgaacactgtattaaaggatcttcag
agcacaaatcttattgaggtgtgcatggctctaaccgttgtcagccaaatgttccccaaa
gatatgattcctgcaatccttcctctggttgaggagaaacttaatcacccaaaagaaatc
attcgcagaaaagcagtcctggcactttataagttctacctaatagcaccaaatcaagtt
caacacatccacaacaagtttcgtaaagctctctgtgacaaggatcctggcgtcatgaca
gcgtcactacacatctacttacagatgatccaggagaatccagaaggttataaagacctg
acagcaagttttgtcaccatactgaagcaagtagtcggaggaaaactgcccatggacttt
aactatcatagtgttcctgctccctggctccaaattcagcttctcagaattctggctttt
cttgggaaaaatgatcaaagtacaagtgagatcatgtatgacatcctcgatgagtcttta
cgaagagcagaaataaatcataacatcacctatgcaatattatacgagtgtgtaaaatgc
atttacacaattcatcccaaatctgaactgttggagaaagctgctaagtgcattggaaac
tttgttctgtcaacaaagattaatctcaaatatctagggttaaaggccctcacctatgtg
gtccagcaggatcctaagctggccctgcagcatcaggtgaccatcattgagtgtcttgat
cacccagacctcatcatcaagcgtgagacactggagttgctctttcggatcactaacgcc
cagaacgttacagtcattgtcgagaagatgctggagtttctgcgcgtcaataaagatgac
tacactaccattgacctggtgggcaaggtggcagagttggcagaaaaatatgcaccaaac
aatgaatggttcattgagaccatgagcacagtgttttcagttggtggagacacgctgcag
cccgacatcccaaacagtttccttaaactgctttctgagggatttgacagcgtggaggac
gacaggaagttgaggctgtttgctgtggattcatatgtttctatgctgcaaggagagcct
ggaaaactgccacagcgctttctccaagtcatcagctgggtcctcggggaatactcctat
ctgaggggggaacttgaagcggcaacagtgctgaagctgctggccaaactactggacatg
aagagcacgagcagtgaaaccaagaactgggtcctcatggcaatgaccaaggtctgtgag
ggcagggtgggtgtttctgtggcccaggaggtttgtgaaacatacagcagctgcctggat
acagcgctgagacagagggctcaagagctgcagcacctcagccaagaccccgacctgcga
gcaaaggtgctccctcgggatgccggcccggagcccttggaggtggattcctctctgtcg
ttcctggatggattcgtgtcggaggcgttggcagcgggcgcggctccatacaagccccaa
catcaacggcaggaggagctggctcaggcaaaagcgttgagcatggagccatacggcctg
cccatcagcatgtcctcctgcagcatcgcagacagacagtctcctactctgttgtctgta
agctctggtctgtcaggtgatagccccgacctctgtcaaaaaggaggctctacgactctg
aagctggacggtgtgaagagggtgtgggggaggcagggctacctggtgcagagggaacct
gtggaggagcctgaccttgttgaggttaccggtcccctccagtcacccaaccagcacgga
ggggctgaggggccccccagccagactcccactccgaacccgaccccgcagcccgaacaa
gagaaacagcagctggcctcttcgctgtttgtcggcttgggctcccaaagctctctgtgt
ctgatggggaaatctgagctgacgacacagcgattcagaagaaaagcaaaaggtccggtc
ctgtcctccggtaccagcgagcaaatatccaactccttcgtctccggttcgagcgtggcc
aataacttgctgtgcaacaacctcctggactcaaacatcacctcagaaacggctgttcct
tcactcgaacagacgtcccaaacctcccacggcgccactgctgcaaacggcgcctgtgac
gtagagtcaacggacagtgacatgaaggaaaattgcccctctgtcattagggataacggg
ctggtagctgctgctccagctccacgtgaaggccgagacaaactgaaagacctgagcact
catcttcctgcagagttctctggactctgtcactcagaaatctctcctctggcctcaaac
caaagcctggatgtctctgcctgtcatgtgcagaaggaggactctttagcgctggtggtt
ttcatgtacaactcttctgactctgacattcctcacatactactagagctccactcagag
gaacttgaggtgtcctgtgactgtgacagtccgggtcaggaggcgaggagccacagcgta
gcggtgcgtcagtactccctgacggtgaagaagccttccgtccacgtcgaagtggtcggg
gtggtgtcttatcaacttcctgttgggacgtctcagtcggtgcagttttcatacaaactg
cctcttgccagcttcatcagacctttgaccgtgtccacggaggagtacgggacaatgtgg
ctggacttctctcatgatacaaagcagaagctgacaccgataactgtcggccaagaacct
ctcatggacactctgaatgtgctaaagaagaaacttaagcttcatgtcgtggaaatcatt
ggaatggaaggtatcgtggcttgccaagtcctccgagatcagccgtgtctgatgcactgc
cgcctgcacgcggggacgctgtccgtgtggctgcgctctccggtgcccgacctgcccgac
tgcctgatgtaccactgtcaaagagctctacaggagcactga
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