KEGG   Pungitius pungitius (ninespine stickleback): 119196361
Entry
119196361         CDS       T07626                                 
Symbol
tpm1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
  KO
K10373  tropomyosin 1
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug04260  Cardiac muscle contraction
ppug04261  Adrenergic signaling in cardiomyocytes
ppug04814  Motor proteins
ppug04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    119196361 (tpm1)
   04820 Cytoskeleton in muscle cells
    119196361 (tpm1)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    119196361 (tpm1)
   04261 Adrenergic signaling in cardiomyocytes
    119196361 (tpm1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ppug04812]
    119196361 (tpm1)
   04147 Exosome [BR:ppug04147]
    119196361 (tpm1)
Cytoskeleton proteins [BR:ppug04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     119196361 (tpm1)
Exosome [BR:ppug04147]
 Exosomal proteins
  Exosomal proteins of microglial cells
   119196361 (tpm1)
SSDB
Motif
Pfam: Tropomyosin Laminin_II CLZ CCDC39 Sec2p Rod_CreS ATG16 TMF_DNA_bd FKBP15 Lebercilin DUF3450 CENP-F_leu_zip PUMA_CC HAUS1 DUF745 ERM_helical AAA_13 EzrA Laminin_I DUF1664 CC_Bre1 DUF16 SlyX TMP_N
Other DBs
NCBI-GeneID: 119196361
NCBI-ProteinID: XP_037307867
LinkDB
Position
6:16763250..16773467
AA seq 284 aa
MDAIKKKMQMLKLDKENALDRAEQAEGDKKAAEDRSKQLEDDLVALQKKLKGTEDELDKY
SEALKDAQEKLELAEKKAADAESDVASLNRRIQLVEEELDRAQERLATALTKLEEAEKAA
DESERGMKVIENRAMKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERAE
ERAELNEGKCSELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq 855 nt   +upstreamnt  +downstreamnt
atggacgccatcaagaagaagatgcagatgctcaagctcgacaaggagaatgccttggac
agagctgagcaggcggagggggacaagaaagcggcggaggacagaagcaaacagcttgaa
gacgatttggtagctctgcagaagaagctgaagggaactgaggatgagttggacaagtac
tccgaggctcttaaagacgcccaggagaagcttgagctggctgagaagaaagccgctgat
gccgagtccgatgtcgcctcccttaacaggcgtatccagctggttgaggaggagttggat
cgcgcccaggagcgtctggccacggccctgaccaagctggaggaggctgagaaggccgct
gatgagagcgagagaggcatgaaggtcattgagaacagggccatgaaggatgaggagaag
atggagctgcaggagatccagctgaaagaggccaagcacattgctgaggaggctgaccgc
aaatatgaggaggtcgcccgtaagctggtcatcattgagggagatcttgagcgtgcagag
gagcgcgctgagctgaatgaaggcaaatgctccgagcttgaggaagagttgaaaactgtg
accaacaacctgaagtcactggaggcccaggctgagaagtactcacagaaggaggacaaa
tacgaggaggagatcaaggtcctcaccgacaagctgaaggaggctgagactcgtgctgag
tttgctgagagatcagtagccaagcttgagaagaccattgatgacttggaagatgagttg
tatgcccagaaactgaagtacaaggccatcagcgaggagctggaccacgccctcaacgac
atgacctccatataa

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