Pungitius pungitius (ninespine stickleback): 119196396
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Entry
119196396 CDS
T07626
Symbol
caprin1b
Name
(RefSeq) caprin-1b isoform X1
KO
K18743
caprin-1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119196396 (caprin1b)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
119196396 (caprin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
119196396
NCBI-ProteinID:
XP_037307944
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All DBs
Position
6:14647323..14655145
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AA seq
715 aa
AA seq
DB search
MPSAMNAVQSASPDVGSAPGSMGNFALGGQSEVMKQVLCVLDKKVRNMEKKKSKLDDYQV
KKNKGERLNQDQLDALTKFQEITYNLEFGRELQKTFITLGQDIQKAVKKSARREQLQREE
AEQKRLKTILELQFLLDRLGEDNVRRDLKQGVGGSPILTDAHLAAFDEFYKLVGPDRDQN
VRLVDQYEEASVHLWDLLEGKDKAVVGTTYKALRETLDQVMLGGYFDQVQSHQNGVCEEE
EEEEAEEEEAEEPASVAVAVAAAAAAPAVVAESSEAEEQSQTADPETEVVEEFTDSIAVE
TTEFINRQFIPDGTYSGSEKVQGDEWATETEVPYSPVLPVFHSQAVTAIQQQQQPPPVQP
AASPVALETHPLNLVSPVPPTDPLVRKQVVQDLMAQMQGMYNFMQDSMLEFDGQPIDPAI
VSAQPMKPAQNMDLPQMVCLPAHPESRLSQPKSVPVLPDPAQVPIVSPTPPPMYQTSHTP
DPRPATESIDAIQTSSSSEQPPPSAAHPPVSQTQVFQPVSKAPHSSGINVNAAPFQSMQT
VFNLNAPVPPANETEALNQASQYQNSYNQAFSSQPQHPVEQPEMQPEQLQSVVGAFHSQD
QSGGHQQPPQQGPGFARQGQSFYNSRGMSRGGPRNARGMINGYRGSSNGFRGGYDGYRPP
FANTPNSGYGQTQFSTPRDYSNGNYPRDGYQPNYKRGAGQGPRGVSRGSTQAIRS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgccctcagcgatgaacgcagtgcagtctgccagcccagatgtgggatccgctccaggg
tcaatgggcaattttgcacttggaggacagtctgaagttatgaagcaagtgctgtgtgtc
cttgacaagaaggtccgcaacatggagaaaaaaaagagtaaactggatgactatcaagtc
aagaagaataaaggggagcgtctcaaccaggaccagctggacgcactgaccaaattccag
gaaatcacctataacttggaatttggccgagagctgcagaagacgttcatcacactggga
caagatatccagaaggcggtgaagaagtctgcacggcgggagcagctgcagcgggaggag
gcagagcaaaagaggctgaagaccattttggagctgcagttccttctggaccggctggga
gaggacaatgtgcggcgggacctgaagcagggagttggcggctcaccaatcctgacggat
gcacaccttgcagcttttgatgagttctacaagctagtggggccagaccgtgaccaaaat
gtcaggttggttgaccagtatgaagaagcatctgtgcacctctgggacctactggaaggg
aaggacaaggctgtggtcgggacaacatacaaggcactgagagagactttggaccaggtt
atgctgggtgggtactttgaccaggttcaatctcaccaaaacggagtgtgtgaggaggaa
gaggaggaagaagcagaagaggaagaggctgaagaaccagcctcggtggcggtggcggtg
gctgcagcagcagcagctccggctgtcgtagctgaatcgtcagaagcagaagagcagagt
cagactgctgatccagaaactgaagtcgttgaggagttcacagattccattgcagtagaa
acaacagagttcataaacagacagttcattccagacggcacatacagcggcagcgagaag
gtgcagggggacgagtgggccacagaaacggaggttccttattcgcctgttctgcctgtc
ttccactctcaggcagtcactgccattcagcagcagcagcagccgccgccggtgcagcct
gcggcttcacctgttgccctggagacccacccattgaacttggtgtctcctgtgccgccc
actgaccccctggtcaggaagcaggtggtgcaggacttaatggcacagatgcagggaatg
tacaacttcatgcaggactctatgctggagtttgatggacagcccattgacccggccatt
gtctcagcgcagcctatgaaacctgctcagaacatggacttaccacagatggtgtgtctt
ccagctcacccagagtcccggctatcgcaacccaaatctgttcctgtcctacctgaccct
gcacaagttcctatcgtctccccgactccgccccccatgtatcagacctcacacacgccc
gaccctcgacctgctacagaatccatcgacgccatccagacgtcctcgtcgtcggagcag
cctccaccctctgcagctcacccacccgtctctcaaactcaagtatttcagcctgtttcc
aaagctccacacagcagtggcatcaatgtcaacgccgcaccattccaatcaatgcagaca
gtgttcaacctcaatgctccggtcccaccggctaatgagacggaggctttgaaccaggcc
agccaataccagaacagctacaaccaagccttcagcagccagccgcagcatcctgtggag
cagccagagatgcagccagagcaactgcaatctgtagttggtgccttccattcccaagac
cagtcggggggccatcaacagcctccgcagcagggcccaggctttgctcgacagggtcag
tccttctacaacagcagaggcatgtcgcgaggtgggcctcgcaatgccaggggcatgatc
aacggctacagaggctcatcgaatggattccgaggtggctatgatggttatcgtcctcct
ttcgccaacactcctaactccggttatggacagactcaattcagcacacctcgggattac
tcaaacgggaattatccgagggatggttaccaaccaaactacaagcggggagctggtcag
ggacccaggggagtgtcgagaggcagcactcaggcaatacgatcctga
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