Pungitius pungitius (ninespine stickleback): 119196400
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Entry
119196400 CDS
T07626
Symbol
rbm28
Name
(RefSeq) RNA-binding protein 28
KO
K14573
nucleolar protein 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119196400 (rbm28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppug03009
]
119196400 (rbm28)
Ribosome biogenesis [BR:
ppug03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
119196400 (rbm28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
DUF4245
Motif
Other DBs
NCBI-GeneID:
119196400
NCBI-ProteinID:
XP_037307952
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All DBs
Position
6:complement(14015819..14022348)
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AA seq
771 aa
AA seq
DB search
MERDAMHQRTLFVSPLPASATNKRLEEIFSEIGPIKQCFVVKEKDSETCRGFGYVIYSMV
EDARRALKEVKEYDGRKVIVAVAKRKIKDKGKKAPKEPAAAPKENEKSKGVRKTQLKSRL
IIRNLSFKCSEDDLKQILSKFGTVLEAKIPLKPDGKMRGFAFVLFKNVCEAGNALNAMNM
KEIKGRQVAIDWAVPKDKYIATQQSTAEKNTAATTNIMDTKSDTKEKDEEKPQAAPEKKR
LPSKPSVKQLEESQSEDDDDDEDEDASEELDSKEEEEEDDVSQEEDDGSDDDDDGDDDDG
DDDESSLDSNDDDDDEEEEESAKKKTSKKPLPSDVKEGRTIFIRNLSFDTEEEGLEEVLL
KYGELNYIKIVIHTATGHSKGCAFVQFKTKEAADKCIAEAADEAENGGIRVDGRKLLVVA
AVTREDASKLKVDKVKVETGTRNLYLAREGLIRAGTKAAEGVPEADMVKRTRFEEIKRTK
LRAINVFVSKNRLCVHNLPKSVDDKKLRALCLQAVKGEKGVRMTECRVMYDKRPVKGQPM
GKSLGYGFVQFQAHEHALCTLRYLNNNPDIFGPHKRPIVEFSLEDSKKLQMKELRQQRNK
EHNLTLKRGPKLPPQTVKDDKGPRKGPNEAQSSSKQTRNEQAPVETQKQSTRFLGFQTKP
EVEHVSLENGKKRKKILNFPSHRGPKIRMRDKGKQQAPPPKKARPGSTRKDRQRQQMEKP
TQRSNQVKMQKKNFKRKGGDRFDSLVEQYKKKLMGNSDNITNLKRNKWFHS
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggacgccatgcaccagcggaccctgttcgttagccccctgccagcctcagct
accaataaacgactagaggaaatattctctgaaattggtccgataaagcaatgtttcgtc
gtcaaagagaaagactcggagacctgtcggggctttggctacgtcatatattccatggtg
gaagacgcacggcgagctttgaaagaagtaaaggaatacgacggacgaaaggttattgta
gctgtagcgaagaggaaaattaaagacaaagggaaaaaagcacccaaagagcctgctgca
gcacccaaagaaaatgagaaatccaaaggtgtccggaagacccagctgaaatccagactc
atcataaggaacctgagttttaagtgctcagaagacgacctgaaacaaattttatccaag
tttggaaccgttctggaggccaaaattcccctcaaaccagatggaaagatgcgtggattt
gcgtttgtccttttcaaaaatgtatgtgaggcaggaaatgcgcttaatgccatgaacatg
aaggagattaaaggtcggcaggtagcaattgactgggctgtgcctaaggacaagtatatc
gctacgcagcaatccactgcagaaaaaaacacagcagcaacaacgaacattatggacacg
aaaagtgacactaaagagaaggatgaagaaaagccacaagctgcacctgaaaagaaaagg
ctgccttccaaaccatctgtgaagcagttggaagaatcccaatcagaggacgacgacgat
gatgaagatgaagatgctagtgaggaactagacagtaaggaggaggaggaggaggatgat
gtgtcccaggaagaagatgacgggagtgacgatgatgacgacggcgatgatgatgacggc
gatgatgatgagagtagccttgattcaaatgatgatgatgatgatgaagaggaagaggaa
tcagctaaaaagaaaacatcaaagaaacctctcccttcagatgtgaaagagggcagaacc
attttcatcaggaacctttccttcgatacagaagaagagggccttgaggaagttctgctg
aaatatggagagctgaactacattaagattgtcatccacacagcaacaggacactcgaaa
ggttgtgcatttgttcaattcaagactaaagaggctgcagacaagtgcatagcagaagct
gcagatgaagcagagaacggtggcatccgtgtagatggcagaaagctgttggttgtggca
gcagtgaccagagaggatgcttccaagctgaaggtggataaagtgaaagtggaaacgggc
accagaaacctgtatctggccagagagggactgatccgtgctggaaccaaagctgcagag
ggtgttcctgaagcagacatggtcaaaagaaccaggtttgaagaaataaagaggacgaag
cttcgagccatcaatgtgtttgtgtcaaagaatcgcctatgtgtccataacctgccaaag
tcagtggacgataaaaaactccgagcactctgcctccaggcagtaaaaggagaaaaggga
gtccgcatgacagagtgccgggtaatgtatgacaagaggccagtgaagggtcagccgatg
ggaaaatctttaggttacgggtttgtccagttccaggcccatgaacatgctctctgcaca
ctccgttaccttaacaacaaccctgacatctttggcccacataagagacctattgttgaa
ttctcactggaagattctaagaaactccaaatgaaagaactgcgtcaacaaagaaataag
gaacacaatctgactttaaaaagaggaccaaaacttccaccccagacagtcaaagatgat
aaaggacccaggaaaggtccaaatgaagcacaatcctcatccaagcaaacacgaaacgag
caagctcctgttgaaacccagaagcaaagcacacgctttttaggcttccagaccaaacct
gaggtggagcacgttagtttggagaatggaaagaagcggaagaagattctaaactttcct
tcccaccgggggcctaagatcagaatgcgcgacaagggaaagcaacaagctccgccaccc
aagaaagcccggccgggatccaccaggaaggaccggcaaagacagcagatggaaaagccc
acacagcgcagcaaccaggtcaaaatgcaaaagaagaatttcaaaagaaagggtggggac
cggtttgacagcctggtggagcagtacaagaagaaactgatggggaacagtgacaacatc
accaatctcaagcggaacaagtggttccatagttaa
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