Pungitius pungitius (ninespine stickleback): 119196440
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Entry
119196440 CDS
T07626
Symbol
fanci
Name
(RefSeq) Fanconi anemia group I protein
KO
K10895
fanconi anemia group I protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
119196440 (fanci)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119196440 (fanci)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
119196440 (fanci)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S1
FANCI_S3
FANCI_S2
FANCI_HD1
FANCI_S1-cap
Motif
Other DBs
NCBI-GeneID:
119196440
NCBI-ProteinID:
XP_037308033
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All DBs
Position
6:960246..969545
Genome browser
AA seq
1324 aa
AA seq
DB search
MDKIIALSDGDNTAELQKYLCTLTNDQLTTVINNGALKSKKVGAMIKGIFKGSAPDSPEG
SNRRLLVYQHCIPLCESGDLQAEVAADIIGLLMLETHTLSGTSLAKLASLFVEAIKVGKM
GSGKSLELFPTVLTALSACEALSYGKGELSGGEYKKQLINSLCSSRWDPQCVIHLTTMFR
DVPLSSEELQFVVEKVLRMFTKLDLQEIPPLVYQLLLLSAKGCKKQVLDGIICYFKEKDV
CQDEEQKLGESLDLEVQSIPLDQLRHVEGTAILHIVFAIRLDHELGREFLKSVKTSYGDL
CSFSVALLLSVARIQRYEEQVFDLLKGAIIKSFKDEQLQQGSKFLRDLLPGHCSVAQMIL
DTVKNSVFGWDHVTQGLVQLGFFLMDAFGPKPGPFGKTTEGTVSVARTPNQQACKLGGQV
LLQGFKVHEPIRGEILDQVLNRLVTKTASPVNNYLDLFSDIVVSAPMILLESSSKVTETF
DHLSYLPLTTVQGLLKAIQPLLKVSMSLKDALILVLRKAMFSSQLDGRKSAVSGFLLLLK
NFKVLGSLASSQCSQAVSSSQIQVDVHAGYNSAANEAFCLEILSSLRRCLGQQADVRLML
YEGFYDVLRRNSQLGSSVMQTLLSQLRRYYEPEQDLLPPVKLEPCITALGDQVYLQEPLA
HLLSCTVHCLLWLQNMRQSANADEEEEEEEEDEGGEGYQCELQAVLESMTRRMIKCELED
FELDKSAEFSTANSVGVKNNIYAVLVMGVYEILMEYNFIKANYSKGRFEELLEMFNRYHK
LAEILKEKSGKARGLSNKIPRSLLSLGFISTLLTVLFRDSTQSREEALSVLRSSGEFVRY
AVNVAVQKIQQLEETGHTDGPDGQNTDRTFRFLCDTTSVLLWRYTNVPSGVEDAGKKEKR
SSLSLVCLEGLLRIFTACQQRYADRMAQLLSSMEISEDDAEPDEGNVTEMNFFYIRQFQR
ALFTQLSGGEEEFNSKEAQLLVSILCVLSRQLKPSSQQFVQMITWTVKICKETSFEDSAF
SKGLLSLLFNLHVLYKSPVSLLLELCQDIHSQLGDIDENVEVEKQCHFAIINMKTAPAGA
LLVLSQVDRVLDEVDWLIARKKSQTSSDKSGSGEATQTAGQQDPMEKAVTLQLGTLLTAL
NELVQTALLPGPCTITLLRALSRTYTTLTTLVKYYIQVCASQHAALPARFEKLVKLSGSH
LTPQCYSFITYAQNGEFGGGGADDKKKKKRNEVNSAPSAKLLRETKAIPNVIFSIEQYEK
FLITLSKKSKVNLMQYMKLSTSRDFRINSATLDAALQEQDASQETNASQEAEETQEPRQK
KRKQ
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatcatcgcactgtcagacggggacaatactgccgaactccagaagtacctg
tgcacgctcacaaatgatcagctaaccactgtgattaacaatggcgcactgaagagtaag
aaggtcggtgccatgattaaaggcatattcaaaggctccgcaccagattcccccgaaggg
tcaaaccgcagactccttgtttatcagcactgcatccctctgtgtgagtctggggatctt
caggctgaggtggcagctgatatcattggactgctgatgctggagactcacacgctgtcc
ggaacatctcttgcaaaactggcgtctctttttgttgaagccattaaggtggggaaaatg
ggcagtgggaaatccctggagctatttcctactgtgcttactgccctttcggcatgtgaa
gccttgtcctacggcaaaggcgaactcagtggtggagaatacaagaaacagctgatcaac
agcctctgctcaagcagatgggacccgcaatgtgtgatccacctgacgaccatgttcagg
gatgtgcccttgtcatcagaggagctgcagtttgtggtggagaaagtactgcggatgttc
accaagctggatctgcaggaaattccaccactggtttatcaactgctgcttttatctgca
aaaggttgtaagaaacaggtcctggatgggatcatctgttattttaaggaaaaagatgtc
tgccaggacgaggagcagaaacttggagagagcctggatttagaggttcagtccatccca
ctggaccagttgaggcatgtggagggcactgccatcctccacatagtctttgctatacga
ctcgaccatgaacttggcagagaattccttaaaagcgttaagacatcatacggggatcta
tgctctttcagcgttgccctcttactctcggtggcacgcatccagcgttatgaagagcag
gtgtttgaccttttgaaaggggcgatcatcaagagcttcaaggatgagcaactgcagcag
gggtcaaagttcctgcgggacctcctgcctggtcactgcagtgtggctcagatgattctg
gacacagtcaagaacagtgtgtttggttgggatcatgtgacccagggtctggttcagctg
ggcttcttccttatggatgcatttggacccaaacctggaccgtttggcaagaccactgaa
gggactgttagcgtagcccggacccctaatcagcaggcgtgtaagctgggaggacaggtg
cttctgcaaggctttaaggtgcacgagcccatcagaggcgagatactggaccaagtcttg
aatcgattggtcacaaagacggcctcgcctgtcaataattacttggatcttttttctgac
attgtggtttctgctcccatgatcctcctggagtcatcttctaaggtgacagagacattt
gaccacctatcatacctgcctttgaccactgttcagggtctcctaaaagctatccagcct
ttgctcaaggtcagtatgtctttgaaagatgctttgattctagttctccgcaaggccatg
ttttccagccaactggatggcaggaagtctgcagtgagcggcttcttgttgctgctaaag
aacttcaaagtgttgggaagcttggcctcgagccagtgtagccaggccgtctcctctagt
cagatccaagtggacgttcacgcgggctacaactcggctgccaacgaagcgttctgtctg
gagatcctcagcagcctgcgccgctgcctcggccagcaggccgacgtacgcctcatgctc
tacgagggtttctatgacgtcctccgtcgcaactctcaacttgggagctccgtcatgcag
accctcctctcgcagctgaggcggtactacgagcctgaacaagacctcctgcccccggtg
aaactggagccgtgcatcacagcactcggagaccaggtctacctgcaggagccactggcc
cacctgttgagctgcactgtgcattgcctactgtggctgcagaacatgcgtcaatcagcc
aacgctgacgaggaggaggaggaggaggaggaggatgaaggaggggagggataccagtgt
gaactacaggcagtccttgagagcatgacaagacgtatgatcaagtgtgaactagaggac
tttgagctggacaagtcggccgagttctccacagcaaacagtgttggggttaaaaataac
atctatgctgtgctggtgatgggtgtgtatgagatccttatggagtacaacttcatcaaa
gccaactacagtaagggccgctttgaggagctcctggagatgttcaaccgctaccacaaa
ctggctgagatcctgaaggagaaatctgggaaggctcgagggctctcaaacaagattcct
cgtagtttactctctttgggcttcatatcaactctcctcactgtgctattccgggacagt
actcagagcagagaggaggctctctcagtgcttcgctcaagtggagagtttgtgcgctac
gccgtgaatgtggccgtacagaagatccagcagctggaggagacgggacacacggatgga
ccggatggacagaacacggacagaactttccgcttcctctgtgacacgacgagtgtgctg
ttgtggcgttacaccaacgtccccagcggtgtcgaggacgcagggaagaaggagaagcgc
tccagcttgtccctggtttgtctggaaggtctgctcaggatcttcactgcttgtcagcag
cgctatgcggacaggatggctcagctcctctcctccatggaaatctctgaggacgacgcc
gagccggacgaaggcaacgtcacggagatgaacttcttttacatccgacagtttcagagg
gcgctcttcacccagttaagcggaggggaggaagaatttaacagcaaagaggctcagctg
ctggtcagcatcttgtgtgtgctttcgcgccagctaaagccctcctcccagcagtttgta
cagatgatcacttggactgtgaagatctgcaaggagaccagttttgaggattcggctttc
tccaaggggctgctctctctcctcttcaacctgcacgtcctctataagagtcctgtaagc
ctgctgctggaattgtgccaagacatccacagtcaacttggagacattgatgagaatgtt
gaggtggaaaaacagtgtcactttgccatcatcaacatgaagactgcacccgcgggagcg
ctgctggtcctgtctcaggttgacagagtgcttgatgaagtggactggctgatagcccgg
aagaaaagccagacgtcctctgacaagtcgggttccggcgaggccacccagaccgcaggc
caacaggacccgatggagaaagcagtgacgctgcagctcgggacccttttgacggcttta
aacgagctggtccagacggccctgctgcccggcccctgcaccatcacgctgctgagagcg
ctgagccgcacatacaccaccctcaccacgctggtcaaatactacatccaggtgtgtgcc
agccagcacgctgcactgccagcacggtttgagaagctggtcaaactgtcgggctcccac
ctaactccacagtgctactccttcatcacgtatgcacagaatggagaatttggtggtgga
ggagcagatgacaagaagaaaaagaaaagaaatgaagtgaactctgctccctctgcaaag
cttctgcgtgagactaaagccatccctaacgtgatcttcagtattgagcagtatgaaaaa
ttcctcatcacgctctcaaagaaatcaaaggtgaacctgatgcagtacatgaagctgagc
acctccagggatttccgcatcaactctgctactctggacgcagcccttcaagagcaggac
gccagtcaggagaccaacgcgtcacaagaggccgaggagacacaagaaccccgtcagaag
aagagaaagcagtga
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