Pungitius pungitius (ninespine stickleback): 119196458
Help
Entry
119196458 CDS
T07626
Symbol
nedd1
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119196458 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119196458 (nedd1)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
119196458 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
119196458 (nedd1)
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
119196458 (nedd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_LRRK2
PEP5_VPS11_N
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
119196458
NCBI-ProteinID:
XP_037308058
LinkDB
All DBs
Position
6:complement(22237782..22243779)
Genome browser
AA seq
651 aa
AA seq
DB search
MEEVTRLVSTGDCVKVWDAVAMAPLQQFNPHSSSHPVAQACWSSNNQYLVSASSSGDKLV
VSSLKASPVPVVELGDGKKQTSVCLSSSSQFLVSGGLDQCVHIWDLKTKRLHRSLKDHKE
EVTCVSFNANDSYVASGSTSGDLVLHSLTTNLSSKAFGHGSNQPIRALRLSALRRSLMGS
VSDSGTVVLWDANTQKELHVFDGAHKAPGSGLAFSPASELLVVSVGLDKKIVCYDTTSKI
VLRSIRVESPLTSVDFTPDGTGLVVGSTQGKIYQYDLRNSSAPTRVTAAHKTSVTCLRFQ
SSSSKLKSSKPGSTKIAKRPSIKLSNSQTDSAPGPGPSPLSQVKGTGGAGPEPMSRDQGA
EPHVLVEKFGSVGRNSLDVFSPVREDSRPHGASGETPFGRAHGPTGRQKEGGSGCGFEGQ
QVVGRASLDIFSPVREDVNSLRKTPLGTPLMGAAGRCYSPLSIFQTPPPIREEEPIPAAA
AEPCDSRKSNNASSSSLEGEGPATPTEPQLTNHSQPAPAFFTPEAGLRRSNGIQPQLNYQ
SPGLGAAGPSLSASVTSSLSQNIAELVGQTGPAPLTSLQIHFIQNMIHETVEDFRDACHR
DIINLQVEMVRQFYIQLNEFHGLIEKYSVNESLVEEVERLREENRRLRTNY
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgacccgcttggtgtcgacaggagactgcgtgaaggtgtgggatgcggtt
gccatggcgccgctgcagcagttcaacccccacagcagcagccacccggtggctcaggcc
tgctggagctccaacaaccagtacctggtcagcgccagcagcagcggagacaagctggtg
gtgtccagcctcaaggcctccccggtcccagtggtggaactgggcgacgggaaaaagcaa
accagtgtgtgtctgagctcctcctctcagttcctggtgagcggaggtctggaccagtgc
gttcacatctgggacctgaagaccaagaggctgcaccgctccctcaaggaccataaagag
gaggtgacctgtgtgtccttcaatgctaacgacagctacgtggcctccggctccaccagt
ggagatctggtcctccacagtctgaccaccaacctgtccagcaaggccttcggacacggc
agcaaccagcccatccgcgccctgaggctgtcggccctgagacgctctctgatgggcagc
gtctctgacagcggcaccgtggtcctctgggacgccaacacccagaaggagctgcacgtg
ttcgatggcgcccacaaggcgccgggctccggcctcgccttctcccccgccagcgagctg
ctggtggtcagcgtgggcctcgacaagaagatcgtctgctacgacacgaccagcaagatc
gtcctgaggtccatccgggtggagagcccgctcacctcggtggacttcacgccggacggc
accggcctggtggtgggctccacccagggaaagatctaccagtacgacctgaggaactcc
agcgcccccaccagggtgaccgcggcacacaagacctccgtcacctgcctgcgcttccag
agcagcagcagcaagctcaagtccagtaaaccgggctccaccaagattgccaagagaccc
tcaatcaagctgtctaacagccagacagactccgcccctggtccaggcccctcccccctc
agccaggtgaagggtacagggggcgccggaccagagccgatgtcccgggaccagggggcg
gagccacatgttctggtggagaagttcggcagcgtcgggcgaaacagtctcgacgtgttc
tccccggttcgggaagactctcggcctcacggggcgagcggagagacgccgtttggacga
gcacacggtccgacgggacgccagaaggagggcggttctggttgtggttttgagggtcag
caggtggtcggtcgggccagtctggacatcttctccccagtcagagaagatgtgaactcc
ctccgtaagacccccctgggaacgcctctgatgggcgccgcaggccgctgctacagtcca
ctgtccatcttccagaccccgcccccaatccgagaagaggagccaatccctgctgctgca
gccgaaccatgtgactccagaaagtccaacaatgccagcagctccagtctggagggggag
gggccggccacgcccactgaacctcagctgaccaatcacagccagccagccccggccttt
tttaccccagaggcgggcctcaggagatccaatgggattcaacctcagctgaactaccag
tctcctggactgggagctgcaggtccatctctgtcggcctctgtgacctcgtctctctcc
cagaacattgcagagctggtggggcaaactggacctgctcccctcacgtcccttcagatc
cacttcatccagaacatgatccatgagaccgtggaggacttcagggacgcctgtcacaga
gacatcatcaacctgcaggtggagatggtccgacagttctacatccagctgaacgagttc
cacggcctgatcgagaagtactcggtgaacgagtctctggtggaggaggtggagcggctg
agggaggagaaccgccggctccgaaccaactactga
DBGET
integrated database retrieval system
