Pungitius pungitius (ninespine stickleback): 119196483
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Entry
119196483 CDS
T07626
Symbol
pus7
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppug03016
]
119196483 (pus7)
Enzymes [BR:
ppug01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
119196483 (pus7)
Transfer RNA biogenesis [BR:
ppug03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
119196483 (pus7)
Prokaryotic type
119196483 (pus7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
DUF4831
NIL
Motif
Other DBs
NCBI-GeneID:
119196483
NCBI-ProteinID:
XP_037308106
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All DBs
Position
6:complement(18565025..18571697)
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AA seq
635 aa
AA seq
DB search
MAEPEPEPVLVGEKRGCPDCEEEETPTKKPRVEKDQENGGPPHHGEEDETTGDASDGEEE
VETFADMMKHGLTELDVGILKYVSNHEGFSGILKERYSDFVVNEISKQGKIVHLDDLSVP
PEAEEVPEVEPQPEDADVLTEEQKKQLGELQLYKNKEDNVSIEVVDDTKEKRTVVHKAIK
TQYPGLETMTEERDGRKFIVAYHAAGKKALAEVKATAAPRKHFWPKNRGNFCHFVLYKEN
KDTMDAINVLSKFLRLRPNMFSYMGTKDKRAITVQEIAVLKITAERLSHLNKCLINLKLG
NFCYKNHPLKLGELQGNHFTVIIRNISGTDEQVQQALTSLKETGFVNYYGMQRFGTTAVP
THHVGRAILKDNWKEVVDLILKPRPGAEKEFLVRCREEWAKTQDPEAALKKLPNKRCVEG
QLLRGLSMYGKKNIVTAFGMIPRNNRLMYIHSYQSAVWNTMVSRRIEAFGLKAVEGDLVL
KGTTAHVLSAAEAEGCSIHDIVMPLPGFDVIYPSHPVGKGYRELLSADGLDIDNMRHNVK
DYSLAGAYRRIIIRPSDVTWEIVQYDDPKISLVHSDFEKLENKPAPVFNKEGKYRALRME
FSLPPSTYATMAIREVLKLDTSIKKQTQLNTTWFN
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcctgagcccgagccggtcctcgttggagaaaagaggggctgtccagattgt
gaagaggaagaaacgccgacaaagaaaccaagagttgagaaggatcaggagaatggaggc
cctccccatcacggggaggaggacgagaccactggcgacgcaagcgatggagaggaggaa
gttgagacctttgcggacatgatgaagcatggcctcactgagttggatgtgggcatccta
aagtatgtcagtaaccacgagggcttctctggaatcctgaaggaaagatactctgatttc
gttgtgaatgaaatcagcaaacaaggcaagattgtgcatttagacgacctctccgtccct
ccagaggctgaggaagtcccagaggttgaaccgcagccagaggatgctgacgtgctgact
gaagagcagaagaagcagctcggggagcttcagctctacaagaataaagaggacaatgtc
tccattgaagtggttgatgacactaaagagaagcgcacggtcgtccacaaagccatcaag
actcagtatcctggtctggagacaatgacagaagagagagacgggcgcaagttcatagtg
gcctaccacgctgctgggaagaaagctttagcagaggtcaaagcaactgcagctccaagg
aaacacttctggcccaaaaaccgcggcaatttctgccactttgtcctgtacaaggagaac
aaggacaccatggacgccatcaatgttctctcaaagttcctcaggctcagacccaacatg
ttttcctacatgggaaccaaggacaagagagccatcactgtgcaggagatcgctgtgctc
aagatcaccgcggagaggttgtctcacctcaacaagtgcctcatcaacctcaagctggga
aacttttgctacaaaaaccaccctctgaagctgggcgagctgcagggaaaccacttcact
gtgatcatcagaaacatctcgggcacagatgagcaggtccaacaggccctgacatccctc
aaggagacgggcttcgtcaactactatggcatgcagcgctttggcaccacagccgtgccc
acgcaccacgtcggcagggctatcttgaaagacaactggaaagaggtggtggatttgatc
ctgaagccgcgtcctggagccgagaaagagttcctggtccgctgcagggaggagtgggcg
aagactcaggacccagaggcagccctgaaaaagctgcccaacaagcgctgcgttgagggg
cagctgctgcggggcctgtccatgtacggaaagaagaacatcgtcactgcttttggaatg
atccctcgtaacaaccggctgatgtacatccacagctaccagagcgccgtgtggaacacc
atggtgagccggagaatcgaggccttcggcttgaaggctgtggagggggacctcgtgctc
aaaggaaccacagcacacgtgctgtctgcagcggaggcagagggctgctccatccatgac
atcgtgatgccacttcctgggtttgacgtcatctacccctctcatcccgtgggtaaaggt
tacagagagctgctctccgcagacgggttggacatcgacaacatgagacacaacgtgaag
gactactctctggctggggcctacaggcgcatcatcatcagacccagtgatgtcacctgg
gagatagttcagtacgacgaccccaaaatctccctggtgcacagtgattttgagaaactg
gagaacaaaccggctcccgtcttcaacaaagaggggaagtaccgggctctgcgtatggag
ttctctctgcctccctcaacctacgctaccatggccatccgagaggtcctcaagttggac
acgagcatcaagaaacagacgcagctcaataccacctggttcaactaa
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