Pungitius pungitius (ninespine stickleback): 119196496
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Entry
119196496 CDS
T07626
Symbol
rfx4
Name
(RefSeq) transcription factor RFX4 isoform X1
KO
K09174
regulatory factor X 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119196496 (rfx4)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Other basic domains
RF-X
119196496 (rfx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
119196496
NCBI-ProteinID:
XP_037308129
LinkDB
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Position
6:complement(566606..580672)
Genome browser
AA seq
737 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLNESESKRYSSHTSLGNLSNDEHEEKENNRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFSEKQDTQPVNAASFGKIIRQQFPALTTRRLG
TRGQSKYHYYGIAVKETSQYYDVMYSKKGAAWVNETGKKEVTKQAVAYSPRSKLGTLLPE
FPNVKDLNLPSSLPEERVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSTTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKIALHD
LPENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVINSADITFQMLEDWRNVDLNSITK
QTLYTMEDSQEQHRQLIIHLYQEFDRLLEEQSPIEAYIEWLDLMVDRCVVKVAGKRPGCL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANVL
MRAMKGEGSTAEREEEFPVTETSAASPSPRPFSPARSVHSACASSAGSPAAAAMSPEYTG
VPTTTTTGAVQSYTWSLTYTVTTAGGSAPEAGQQLSCMRSSAPVPPPSSTHRMPVYREEH
GYTGSYNYGSYANQHPHSIQSQYPSLAHEPAITAPLHYSAYHRSSAQYQLNGQMSRMEPC
LMGSTPRLHPAPVAPRWPDVSPTNACYTSPPMHSSRYATSGDLYSPLGPRRNSEYEHSQH
FPGFAYINGEATTGWAK
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgggctgctggaggagcctgacatggattccacagagagctggattgaaaga
tgcctcaacgagagtgagagcaagcgatattccagtcacacgtctctggggaacctttcc
aacgatgaacatgaagaaaaagaaaacaacagagcctcaaaacctcattcgacaccggct
actctgcaatggctagaagagaactatgagatagctgaaggtgtgtgcatcccccgaagt
gccctctacatgcattacctggacttcagtgagaaacaggacacgcagcctgtgaacgca
gccagcttcggaaagatcataaggcaacagtttccagcgttaactaccagaagacttggg
acaagagggcagtctaagtaccactactacggcatagccgtgaaggagacctcccagtat
tatgacgtgatgtactccaagaagggagcggcgtgggtgaacgagaccgggaagaaagag
gtcaccaagcaggctgtggcgtattcaccgcgctccaaactgggaaccctcctgccagag
tttccaaatgtcaaagacctaaatttaccctccagcctgccagaagagagggtgtcaacc
ttcatcatgatgtacagaacgcactgtcagaggatactggacacggttatccgagccaac
tttgatgaggtccaaagcttcttgctgcacttctggcagggcatgccgccccacatgctg
ccggtcctcggctccaccaccgtggtgaacatagtgggggtctgcgactccatcctctac
aaggccatctccggggtgctgatgcccaccgtcctgcaagctctgcctgacagtttgact
caggttattcggaaatttgccaagcaacttgatgagtggctcaaaatagcacttcatgac
cttcctgaaaacctgaggaatatcaaatttgaactatccagaagattttctcagattcta
aagcggcaaacatcattaaatcatctctgtcaggcctctcgcactgtgataaacagcgcc
gacatcacctttcaaatgctggaggactggaggaatgtggacctgaacagcatcaccaag
cagacactttacaccatggaggactcacaggagcagcaccggcagcttatcatccacctg
tatcaggagtttgatcgtctattggaggagcagtcgccaatcgaggcgtatatcgagtgg
ctggacctgatggtggatcgctgcgtcgtcaaggtggcagggaagaggcccgggtgcctg
aagaaggtggcccaacagttcctgctgatgtggtcgtgttttggtaccagagtcatccgc
gacatgaccctccacagcgcgcccagcttcggctccttccacctgatccacctcatgttt
gatgactacgtgctttacctgctggagtccctgcactgccaggagagagccaacgtcctc
atgagggccatgaagggcgagggcagcacagcagaaagagaggaggaattcccggtgaca
gaaaccagcgccgcctccccgtctccgcgacctttctctcccgctcggtccgtccactcg
gcttgcgcttcctcggccggctccccggcagcagcagccatgtccccggagtacaccggc
gtccccaccaccaccaccacgggcgctgttcagtcatatacctggtcccttacatacaca
gtgacaacggccggcggctcggctccagaggccgggcagcagctgtcctgcatgaggagc
agcgctccggtcccaccgccatcctccacccaccggatgcctgtctacagggaggagcat
gggtacactggtagctacaactacggcagctacgccaaccagcaccctcactccatccag
agccagtatcccagtctggcccatgagccggccatcactgcccccctccactactccgcc
taccaccggtcgtctgcacagtaccagctcaacgggcagatgtcgcgcatggagccatgc
ttgatgggcagcactccgcggctacaccctgcgcccgtcgccccccggtggcccgatgtg
tcaccaactaacgcctgttacaccagcccacctatgcattcatcccgctatgccacctct
ggggacctatactccccccttggcccacgcaggaactcagagtatgaacactcgcagcat
ttccctggctttgcctacatcaacggagaggccaccaccggctgggcaaaataa
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