Pungitius pungitius (ninespine stickleback): 119196535
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Entry
119196535 CDS
T07626
Symbol
cacna2d4b
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4 isoform X1
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04010
MAPK signaling pathway
ppug04260
Cardiac muscle contraction
ppug04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119196535 (cacna2d4b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
119196535 (cacna2d4b)
04261 Adrenergic signaling in cardiomyocytes
119196535 (cacna2d4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119196535 (cacna2d4b)
Ion channels [BR:
ppug04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119196535 (cacna2d4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA_3
VWA
VWA_2
dCache_1
CobT_C
Zn_ribbon_5
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
119196535
NCBI-ProteinID:
XP_037308198
LinkDB
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Position
6:complement(21919169..21945415)
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AA seq
1037 aa
AA seq
DB search
MGGRALLRILGLFCLWITARAQMKIPPETVQQWAMVLSTQLRDLTTKYSGSLLLQKKLKD
VESIIKVVELDGGDLVKKYSDEIEQMLGSKRKSVRRLAESAEDADLYHDFNATLKFDYYN
SMLINTADEDGNSVELGGEFLLEENEHFNKLLVNTLMSDIQIPTNVYNKDPNILNGIYNS
EALNDVFIANFQKDPTLTWQFFGSSTGFFRIYPGIKWTPDSNGVAAFDCRNRNWYIQAAT
SPKDIIIMVDISGSMKGLKMTIAKHTINTILDTLGENDFVNVIAYTDYVRYVEPCFKGTL
VQADLDNREHFKQLVDELHVKGEAKIKNAMKESFKILNEAKLSGRGSMCNQAIMLITDGA
MEDFESVFEEFNWPERRVRVFTYLIGREMTFAQNTKWIACNNKGYYTHISTLADVQENVM
EYLHVLSRPMVINHDHDIIWTEAYMDSVLPSTQELFYTKAQSLLLMTSVAMPVFSKKKET
LSHGILLGVVGTDVPLMEVMKLAPRYMLGAHGYAFLITNNGYILAHPDLRPLYQDGKKLK
PKPNYNSVDLSEVEWEDTEEKLRTAMVRGETGSIRLSIRASVDRGKRPLYLVNDYFYTNI
DGTPFSFGMVLTKGHGGLMFIGNVSVEEGLHDLTSPDLSIATEWTYCETDIDPSHRKYSQ
LQAAIRYLLGQEPDLECDEVLLQQTLFDAVVTAPLEAYWNALMLTDRVEPGVETAFLGTR
AGLTRWMRYAGVETRVAKRFLTATDKDNLFTVDHFPLWYRLAVENPPGSFYYYPVNDKGM
KYVIAVTAVTVSSGGKTAMAGAIGLQMSLDLLEKMFWAIAKQPSDTDCSAIEGVCPLSCE
SSDLNCFLVDNNGFVLLSKERSEVGRFFGEVDGSVMASLIKMGMFKKVSLFDYQAMCKSS
HHHASSARRLVSPFYGVAALIRWFFSNLLMFLLDFNLCGLWHSDYFVDAKAGYHTSHKQK
KVGALQPCDTAYPGFMYDSSVKEANSLIKCGRCQKMFVVQQIPDSNLVMVVAQADCDCSR
QYGAIPLEPKEIKYILL
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggggggccgcgcgctcctgaggattctgggtcttttctgcttgtggattacggctcgc
gctcagatgaagatcccaccggagacggtgcagcagtgggcgatggtgctctccactcag
ctacgagacctcaccaccaaatactccggctctctgcttctccagaagaaactgaaggac
gtggagtccatcattaaggtcgtggagctggacggaggtgacctggtgaagaaatactcg
gacgagatcgagcaaatgttggggagcaagaggaagtctgtgaggaggttggcggagtcg
gcagaggacgccgacctgtaccacgatttcaacgctacactaaagttcgactactacaac
tccatgctgatcaacacggcggacgaggacggcaacagcgtggagctgggcggggagttc
ctcctggaagagaacgagcacttcaacaagctgctggtgaacacgctgatgagcgacatc
cagatccccaccaacgtctacaacaaagaccccaacatcctcaacggcatctacaactcc
gaggcgttaaacgacgtcttcatcgccaacttccagaaggatcccactctcacctggcag
ttcttcggcagctccaccggcttctttaggatttaccccggtatcaaatggactccagac
tccaacggcgtggcggcttttgactgcaggaacagaaactggtacatccaggcagccacg
tctcccaaagacatcatcatcatggtggacatcagcggcagcatgaaggggctgaagatg
accatcgccaagcacaccatcaacaccatcctggacacgctgggggagaacgactttgtc
aacgtcatcgcttacactgactatgttcggtacgtggagccgtgctttaaaggtactttg
gtccaggctgacttagacaaccgagagcacttcaagcagctggtggacgagctgcacgtt
aaaggagaagcaaagatcaagaacgccatgaaggagtccttcaagatcctcaacgaggcg
aagctgagtgggcggggcagcatgtgtaaccaggccatcatgctgatcacagacggagcg
atggaggactttgagtcggtctttgaggagttcaactggcccgagcgccgggtgagggtc
tttacgtacctgatcggcagagagatgaccttcgcccagaacaccaagtggatcgcctgc
aacaacaaaggttactacacacacatctccacgctggccgacgtgcaggagaacgtcatg
gagtacctgcacgtcctcagccgcccgatggtcatcaaccacgaccacgacatcatctgg
acggaggcctacatggactccgtgcttcccagcacccaggagctcttctacaccaaagct
cagagtctgctgctcatgacctcggtggccatgccggtcttcagcaagaagaaggaaacg
ctgtcccatgggatcttactgggtgtggtcggcaccgacgtcccgctgatggaggtgatg
aagctggcgccccgatacatgctgggagctcatggctacgccttcctcatcaccaacaac
ggctacatcctggcgcaccccgacctccgacctctgtaccaagacgggaagaagctgaag
cccaaacccaactacaacagcgtggacctgtcggaggtggagtgggaggacacagaggag
aagctgagaaccgccatggtgagaggagagaccggctccatccggctgagcatcagagcc
tcagtggacagagggaaacgacccctgtatctcgtcaacgactatttctacaccaacatc
gacgggactcctttcagcttcggcatggtgctgacgaaaggtcacggaggcctcatgttt
attggaaatgtctctgtggaggaaggtttgcacgacctcacctcacccgacctcagcatc
gccaccgagtggacctactgtgagaccgacatcgacccgagccaccgcaagtactcgcag
ctgcaggctgccatccgctacctgctgggccaggagcccgacctggagtgcgacgaggtg
ttgctgcagcagacgcttttcgatgccgtggtgacggctccactggaggcttactggaac
gccctgatgctcaccgacagggtggagccgggggtggagacggccttcctcgggactcga
gccggcctcacgaggtggatgagatacgccggagtggagaccagagtggcaaaacggttt
ctcacagcgaccgacaaggacaacctgttcaccgtggaccacttccctctgtggtaccgc
ctggccgtggagaacccccccggcagcttctactactaccccgtcaacgacaaagggatg
aagtacgtgatcgcggtgacggcggtgacggtgtcctctggggggaagacggcgatggcc
ggagccatcgggctgcagatgtccttggatctcctggagaagatgttctgggccatcgcc
aagcagcccagcgacacagactgttcagccatcgaaggcgtgtgtcctctcagctgtgag
agctctgatctcaactgtttcctggtggacaacaacggcttcgtcctgctgtccaaagag
aggagtgaggtgggacgtttcttcggcgaggtggacgggtcggtgatggcctcgctgatc
aagatgggaatgttcaaaaaggtgtcgttgttcgactaccaggccatgtgtaagagttct
catcatcacgccagcagcgcacgccgcctcgtcagtccgttttatggcgtcgctgcgttg
attcgatggttcttctccaacctgctgatgtttcttttggactttaacctctgtggtctc
tggcactccgactacttcgtggatgccaaagccggctatcacaccagccacaagcagaag
aaggttggcgctctgcagccgtgtgacacggcgtatcccggcttcatgtacgactcgtct
gtgaaggaagccaacagcctcatcaagtgtggccgctgccagaagatgttcgtggtgcag
cagatccccgacagcaacctggtgatggtcgtcgctcaggccgactgcgactgctcccgt
cagtacggcgccatcccgctggagcccaaagagatcaaatatatccttctgtga
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