Pungitius pungitius (ninespine stickleback): 119196540
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Entry
119196540 CDS
T07626
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119196540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119196540
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119196540
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
HECT type E3
119196540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
119196540
NCBI-ProteinID:
XP_037308205
LinkDB
All DBs
Position
6:complement(6453447..6461071)
Genome browser
AA seq
995 aa
AA seq
DB search
MLSWGENCQQGFRLRDGSNVSAGDGVHLLNLGFDITDLSAGHSVLAFIKSNGDAAIIRTT
ESQDGRRVRGKQKLVKCREKIQALVCGDNEVTLLSKGGKVLCVDTNHTYIPRPLEALCNI
PVSQVACGSQHSVALTKGGQVYTWGQNSRGQLGLGSSETCTDSPRRLGGLSALPLVQVAA
GGEQSFALCVSGAVLGWGRNHRGQLGLGDTTDRPKPTPVCYLNTKKSSHISCGKEHTAVL
TKDGAVFTFGSGQHGQLGHNSFCDEPRPRLVAELLGAKVTKIACGWHHTLVLTASRKVYS
FGEGELGQLGRAEESHPSVPLPVQLPQDTSHGPIIENIYAGGNCSFATSVKEAPEELNPA
RASNVTPDVIDKWVSESNSKSWKKIKGEILRTFSSASSMNQIFLDQSNDKHFQTSSKYCG
LNMSLARRAFKKLSRNDDVLAEVQAAVLLLLRSLDEIPVGVEGLRIFLLLNELLHWIQRH
DTQGMSITLTEALAAAAVQRLSAESLQVLGDWWSSQTSSTKVRHVAVWKKALSEILSSEP
FPRDSRLRNLLLVLQNMHNANRRVAEHQRIPGETFCVEVSETFLVEDLRIWHSTSNRKVL
DNQPFVLCNFPFVMDLKSKKLAFDIYASSTQRAHQPRIPFAPATESYFFMGLKLKRTSLL
EGTFKQLAAALPQDLKKPLAVYFDEDPKLTDVNKRDLFHHLFPKMVSPRFGMFKFNDSET
LAWFPSTSKEEDKAHFFLFGVLCGLALWNKSLIHFPFPLALFKKLLGVEPTLEDLKEFSP
DVGKSLQCILNYDEDELKILDWDFIINWDGSEVCLDPQNPEKLLTVLNKKEFVDAYVSHA
FNASVQAVFEEFQRGFFQVCDRDPVTLFRPEELQGLLVGQDVYDWATLKQNTLWEVCFGS
STKQMFWEVFDELTEDQRKDFLWFLTGSRRVPILGMDQVRMKVQVTQVQNGQRYDQHFPE
ALTCHSILYLPRYSSKEIMREKLMGALITERAFSM
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgctttcatggggagagaactgtcagcagggcttccggctgagagacggctcgaacgtc
tcagcaggcgacggagttcaccttttaaacctgggctttgacatcacggatctgtcagcg
ggtcacagcgtgctggctttcatcaaaagcaacggagatgctgccatcatccgcaccaca
gagagccaagatgggagaagagtcagaggaaaacagaagttagtgaagtgcagagagaag
attcaagccctggtctgtggtgataatgaggtcacactactctctaagggaggaaaggtt
ctctgtgtggacacaaatcacacttacattccaaggcccctggaagctctttgtaacata
cctgtgtctcaggtggcttgtgggagccagcactcagtggccctcaccaaaggtggtcag
gtgtacacatggggccagaactccaggggccagctgggtctggggagcagtgagacctgc
accgactcgccccgacgcctggggggtctgtcagcgctccccctggtccaggtggcagca
gggggagagcagagcttcgccctctgcgtctccggggccgtgttgggctggggccgaaac
caccgcgggcaactcgggctgggggacacaacggacagacctaaaccaactcctgtttgc
tacttgaacacaaagaaatcaagtcacatttcctgtggaaaggagcacactgccgttttg
acaaaggatggtgccgtgttcaccttcggctctggtcaacatggacagcttgggcacaac
tcattctgtgatgaaccacgacctcggcttgttgcagagctcttgggggcaaaggtcacc
aagattgcttgtggatggcatcacacgttagtgctgacagcgtccaggaaggtttactcc
tttggcgaaggagagttggggcagctgggacgtgcagaggagagtcatccgtccgtgccg
ctaccggttcaactaccacaggacaccagtcatggtcctataattgaaaacatttacgca
ggaggaaactgttcatttgcaacttctgttaaggaagcgccagaagagttgaacccagcc
agggccagcaatgtaacccctgatgtgattgacaaatgggtctctgaatctaattcaaag
tcatggaaaaagatcaagggggaaatcctcaggacgttttcctctgcatcctctatgaat
caaatcttcctcgaccaaagcaacgataaacatttccagacctcgtcaaagtactgcggc
ttgaacatgtcacttgctcgacgtgcttttaagaaactgtccaggaatgatgacgtcttg
gccgaggtccaggctgccgtgctgctcttgcttcgctctctggatgagataccggtggga
gtggaggggttgaggatcttcctgcttctcaatgagctcctgcattggatccagagacac
gacacgcaagggatgagcataactctcactgaggcgctcgccgccgccgccgtgcagaga
ctctccgctgagagcctccaggtcttaggggactggtggtcctcccagacgtcctccact
aaggtgcgacacgttgccgtgtggaagaaggccctctcagagatcctttcctcagagcct
tttcctcgcgactcgcgcctcagaaacctgctgctggtcctccagaacatgcacaacgcc
aacaggcgggtcgcagaacatcagaggatcccaggagaaaccttctgtgtggaggttagc
gaaacatttctcgtggaggatcttaggatctggcattcaacatcaaataggaaggttttg
gataatcagccgtttgtcctgtgtaacttcccatttgtgatggatctgaaatcaaagaaa
ttggcttttgacatctatgcctcaagcactcaaagagcacaccagccaaggattcctttt
gcaccggctacagagtcctacttttttatgggactgaagctgaagcgaacgtcgcttttg
gaaggtaccttcaaacaactggctgctgctctcccccaggacctcaagaagccacttgcg
gtctattttgacgaggacccgaagctcacagacgtcaacaaaagagaccttttccaccac
ttgttccctaaaatggtctcccctcgatttgggatgttcaagttcaacgactccgaaacg
ctggcctggttcccttccacgtcaaaagaggaggacaaggcacacttcttcctgtttggt
gttctgtgtggactggccttgtggaacaaaagtctcatacacttccccttcccactggcc
ctgttcaagaagctgctcggcgtcgagccgacactggaggatttgaaggaattcagcccg
gatgttggaaagagtcttcagtgcatcctaaactatgacgaggatgagctgaaaatactg
gactgggattttattatcaactgggatgggtcagaggtttgcctggatccccaaaatcct
gaaaagctactgacagttctgaataagaaggagtttgtggatgcctacgtgagccacgcc
ttcaacgcgtcggtgcaggccgtgttcgaggagttccagcggggcttcttccaggtgtgt
gaccgggatcccgtcactctgtttcggccggaggagctgcagggactgctggtgggccaa
gacgtctacgactgggccacactgaaacagaacacactgtgggaagtttgctttggctcc
agcaccaagcagatgttttgggaggtttttgatgagctgactgaagaccagaggaaagat
ttcctttggttcctgaccgggtccaggagggttcctatccttggcatggaccaggtcagg
atgaaagttcaagttacgcaggtccagaatggtcagcgttacgatcagcacttccccgag
gctctgacatgtcactccattctgtacctgccccggtactcatccaaggagatcatgcga
gagaagctgatgggggcgctgataacagagagagcattctccatgtga
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