Pungitius pungitius (ninespine stickleback): 119196564
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Entry
119196564 CDS
T07626
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119196564 (robo1)
Cell adhesion molecules [BR:
ppug04515
]
Immunoglobulin superfamily
ROBO family
119196564 (robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
119196564
NCBI-ProteinID:
XP_062417208
LinkDB
All DBs
Position
3:12756609..12956754
Genome browser
AA seq
1702 aa
AA seq
DB search
MMRGTWSGATPLLITVLLRLAQGQEVPLVPETGVAQDGASEGTTPGPTSEHEDDNSLGYT
GSRLRQEDSAPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGERVETDRDNPRS
QRMLLPSGSLFFLRIVHGRRSKPDEGSYICVARNYLGEAASHNASLEVAILRDDFRQNPA
DVIVAAGEPAVLECQPPRGHPEPTISWKKDGINIDDRDERITIRGGKLMITNARKSDAGK
YVCVGTNMVGERESEIAELTVLERPNFVRRPSSQVVLVDQSVEFRCEARGDPVPTVRWRK
DDGDLPKGRYEIREDHTLKIRRLTSADVGSYTCVVENMVGKAEASATLTVHVPPAFVVRP
RNQVVGVGRTVTFQCEATGNPQPAIFWQREGSQNLLFSYQPPQPSSRFSVSQSGDLTITD
AERSDMGYYSCQAINTAGSVLTKALLEITDVISDRPPPVIRQGPANQTVAVDGTVVLNCV
ATGNPTPTILWRKDGVLVSTHDSRVKQLDTGALQIRYAKLGDTGTYTCIASTPSGEASWK
AYLEVHEFGVQVQPNRPTDPNLIPSAPSKPEVTDVTRTSVALSWRPNLNAGATPTSYVIE
AFSHASGSSWQTLAEHVKTESFVLKGLKPSAVYLFLVRAANAYGLSDPSPITEAVKTQDI
PPTSQGVDHRQIQMELGEVIIHLHNPTILSSSSVRVQWTVEQQSQYIQGFKVMYRPLPEG
LQRSEWAVFEVRTPGEDSAVVPQLRKGVTYEFKIRPFFNEFQGTDSDVKIGTTLEEVPSA
PPREVTVAESGDNGTAIVVSWQPPPEEERNGVVQEYKIWCLGNESRYHINRTVDGSALSV
QIPSLAPGIRYSVEVAASTGAGPGVKSDVTFFQLDASGKMTETVVQENPLSQQISDVVKQ
PAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIRKVPSFTFTPTVAYQRGGEVV
SSAGRPGLLNIGESATQPWLADTWPNSCSNHNDCGINCCTAGNGNSDSNLATYSRPADCI
ANYNNQMENKQTNLMVPESGVYGDVDLSNKINEMKTFNSPNLKDGRFVGPGGQPTPYATT
QLIQSAIMGNNVNSDRGTGGSGGGLVGGGEVNEKHSWKPISAQQQKQEMASQLQYSIMEQ
NKLNKDRYRGGDGPVAVTIPYNQTHDSHTGGSYNSSDRGSSSTSGSQGQKKGVRTPKLPK
QSTMNWADLLPPPPANPPPSRSTEEYTLSMEERWDLSAQTQRQRRADSCEPDMQCPMPPS
DMYLQPDELEEEMERGPTPPIRGAASSPAAVSYSHQSTATLTPSPQEEMQPMLQDALDSH
ERRRHTVSPPAPPKPLSPSHPYGYVTSPLDTDGMEEEEEEEDDDILEEEGDETDVEVAKM
HYHHTHPHTHPHHPQMHPRRLLLRGLEQTPASSMGDLESSVTGSMINGWGSASEEDNVSS
GRSSAVSSSDGSFFTDADFAQAVAAAAEYSGHRTAKYPNTLGHEVGGASARKYQINPSSH
RPGSPVSTDSNMSMAAVHRRPPKKQKQHPAGHPGNQRREAYNEDLPPPPIPPPAVLKSPT
HPSKGVLEGRGVISPKVGEVRDKRGGTGGYRPREGSDPRNSSSDRKDAQERQKTAHGGKG
IKHEGSVANKARQHPEDILPYSRPQFPTVNSPRDPSSSSSMSSRGSGGRRRGEGGRRNPA
DMGLNTTGAFQQGDEELQMVES
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtggcacgtggtcaggggccacgcccctcctcatcacggttctgctcaggctg
gcccagggccaagaggttcctttagtcccagagacaggagtcgcccaggatggggccagt
gaaggtacaacgccaggtcccaccagcgaacacgaggatgacaactctttgggctacaca
ggatcccgtctgcgccaagaggactccgcaccccggatcgtggagcacccctctgacctg
atcgtgtccaagggggagcccgccactctcaactgcaaagcggaggggcggccgaccccg
acggtggagtggtacaaggacggcgagcgtgtggaaacggacagggacaatccccgctct
cagcgcatgctgctgcccagcggctcgctcttcttcctccgcatcgtccacgggcggcgg
agcaaaccggacgagggctcctatatctgtgtggcccgcaactacctgggagaggcagcc
agccacaacgcctcgctggaagtcgccattctccgggatgacttcagacaaaaccctgca
gatgtgattgtggcggcaggagagccggcggtgctggagtgtcagcctccgcgtggacac
ccggaacccaccatatcatggaaaaaagacggaataaatatcgacgatcgggatgagaga
atcacgatacgcggcgggaagctgatgatcacaaacgcccggaagagtgatgctgggaag
tatgtgtgcgttggcacaaacatggtcggggaacgagaaagtgaaatagctgaacttaca
gtgctcgagcgccccaacttcgttcgtcgcccaagcagccaggtggtgttagtggaccaa
agtgtagagttcaggtgtgaggcccgaggcgacccagttcccaccgtgcgctggaggaaa
gacgatggcgacctgcccaaaggaagatacgagatccgtgaggaccacaccctgaaaatt
cgccgtctgacctcagctgacgtaggctcctacacctgcgtggtagagaacatggtgggc
aaggcggaggcatcggccacgctcactgtccacgtgcccccggcatttgtggttagacca
aggaaccaggtggtcggggttggcagaactgtcactttccagtgcgaggccaccggaaac
cctcagccagccattttctggcagcgggaaggcagtcagaacctgctcttctcctaccaa
cctccacaaccctccagccggttttctgtatctcagtccggggacctgaccatcactgat
gccgagcgctcagacatgggatactacagctgccaggccatcaacactgccggcagcgtc
ctcaccaaggctctgctggagatcactgatgttatctccgaccgcccgccaccagtcatc
cgccagggtccagccaatcagaccgtagccgtggatggcacggtggtcctcaactgtgtg
gcaacaggaaaccccacccccaccatcctgtggaggaaggacggcgtcctggtgtccaca
catgactccagggtcaaacagctggacacgggtgcattgcagatacgctatgcaaagctt
ggtgacactggaacctacacctgcatcgcctccacacccagtggagaggcctcatggaaa
gcctacttagaggtccacgagtttggagtccaagtccagcccaacaggcctactgatccg
aacttgatccccagtgccccttccaaaccggaggtcactgatgtgacccggacgtccgtt
gccctttcctggagacctaacctcaatgctggagccactcccacctcctatgtaatcgag
gccttcagtcacgcatcagggagcagctggcagaccttggcagagcatgtgaaaactgag
tcgtttgtactgaagggcttaaagcccagtgcagtctacctcttcctagtacgggcagcc
aatgcctacgggctgagtgatcccagtcctataaccgaagctgtgaaaacacaagatata
cctcccaccagtcagggcgtcgaccatcgacagatccagatggagttgggagaagtgatc
atccacctccacaaccccaccattctctcctcctcatctgtcagggtgcagtggacggtg
gagcaacagtcccagtacatccagggcttcaaggtgatgtacaggcctttgccagagggg
ttgcagaggagcgagtgggccgtgttcgaggtgcggacccccggggaggacagcgctgtt
gtgccgcagcttcggaagggagtcacgtatgaattcaagatccgccccttcttcaatgaa
ttccagggaacagacagcgatgtcaaaattggcacgacgctggaagaagtccccagtgcc
ccccctcgcgaggtgacagtggcggagagcggggacaatgggaccgccatcgtcgtctcc
tggcaaccccctccagaggaggagcgcaacggagtggtccaggagtacaagatttggtgc
ttggggaatgagagcaggtaccacatcaaccgaacagtcgacggctcggccctctccgtg
cagatccccagtctggccccggggatccgctacagcgtggaggtggcagccagcaccggg
gcgggtcccggggtcaagagcgatgtcaccttcttccagctcgatgcctctggcaaaatg
acagagaccgtggtccaggagaaccctctttcccagcagatctcagatgtggtcaagcag
cccgccttcatagccggcataggagccgcttgctggatcatcctcatggtcttcagcatc
tggttgtacagacaccgaaagaagaggaatggcctctccagcagctatgcaggcatacgc
aaagtgccatcctttactttcacaccaacagttgcatatcagagaggaggagaagttgta
agcagcgctggaaggcctggtttgctaaacattggggaatctgccactcaaccctggctg
gcagacacgtggcccaactcctgctccaaccacaatgactgcggcatcaactgctgcact
gccggcaacggcaacagtgacagcaacctggcaacgtacagccgcccagcggactgcatc
gccaattataacaaccagatggaaaacaagcagaccaacctcatggtgccagagtcagga
gtctatggagacgttgacttgtccaacaagatcaatgagatgaagaccttcaacagcccc
aacctgaaagatggccgctttgtgggtccggggggccagccgacgccgtacgccaccacc
cagctaatccagtccgccatcatgggcaacaacgttaactcggacagaggaaccggaggg
agtggaggaggactcgtgggtggaggggaggtgaatgaaaaacacagctggaagcccatt
tcagctcagcagcagaaacaggaaatggcctcccagctacagtacagcatcatggagcaa
aacaagctgaacaaggaccgctacagaggaggtgacggccccgtggcagtaaccatcccc
tacaaccagacccatgacagccacactggaggctcctacaacagctccgaccgaggcagc
agtagtacctccgggagtcagggtcagaagaagggagtgcgcacccccaaactacccaaa
cagagcacaatgaattgggctgaccttttgccccctccccctgcaaacccacccccaagt
cggagcaccgaggagtacaccctgtcaatggaagaaaggtgggacttgtctgcgcagaca
caaagacagcgacgagctgacagctgtgaaccagacatgcagtgccccatgcccccctct
gacatgtacctgcagccggatgagctggaagaggagatggagagggggccgactcctccc
atccgaggggcagcctcttcccctgcagctgtatcttacagtcaccagtccacagccact
ctcaccccctcaccccaggaggagatgcagccaatgctccaggacgcactggacagccac
gaacgcaggcggcacactgtgagccctccggccccccctaagcccctctctccttcacac
ccatacgggtacgtcaccagcccattggacactgatggaatggaggaggaagaggaggag
gaggacgacgacatattggaggaagagggcgacgagacagacgtagaggtggccaagatg
cactaccaccacacccacccccacacacacccccaccacccccagatgcaccctcgacgg
ttgctgctacgagggctcgaacagacgcctgcgtccagcatgggcgacctggagagctcg
gtgaccggctccatgatcaacgggtggggttccgcttctgaagaggataatgtctcttcg
gggaggtccagcgccgtcagctcctccgacggatccttcttcaccgacgctgactttgct
caagcggttgccgcggctgcagagtattcaggccacaggacggccaaataccccaacacg
ctgggccatgaggtcggaggtgcttctgcacgaaaataccaaataaacccttcaagtcat
cgccctggtagcccggtgtcgacagacagtaacatgagtatggcagctgtacacaggagg
cctcctaagaagcagaaacagcaccctgctggtcatccggggaaccagcgccgtgaagcc
tataacgaagatcttccaccgccacctatcccacctccggcagtgctcaagtcgcctaca
cacccctccaagggggtcctggaaggccggggagtgatttcccccaaagtaggtgaggtt
cgagacaagagaggaggaacgggcggttatcggcccagggagggctcggaccccagaaac
agctcgtctgaccgcaaagatgcccaagagagacaaaagactgctcatggaggaaaaggg
attaaacacgagggaagcgtcgccaacaaggcacggcaacacccagaggacattctgccc
tatagccggccacagttccccacagtgaacagcccccgggacccaagctcttccagctcc
atgtcctcgagggggtcagggggtcggcgaagaggagaaggaggccgcaggaaccctgca
gacatgggccttaacaccacaggggccttccaacaaggagatgaagagcttcagatggta
gaaagctga
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integrated database retrieval system
