Pungitius pungitius (ninespine stickleback): 119196605
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Entry
119196605 CDS
T07626
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119196605 (rfwd3)
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119196605 (rfwd3)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119196605 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
Beta-prop_WDR5
zf-RING_2
Beta-prop_THOC3
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
WDR55
EIF3I
WD40_CDC20-Fz
zf-RING_5
Beta-prop_EML_2
zf-ANAPC11
zf-C3HC4_3
Beta-prop_WDR3_1st
Rtf2
zf-RING_Vps41
zf-rbx1
WD40_Prp19
Beta-prop_EML
Beta-prop_WDR75_1st
zf-RING_11
zf-C3HC4_4
zf-Nse
Beta-prop_RIG_2nd
Beta-prop_EIPR1
zf-UDP
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
119196605
NCBI-ProteinID:
XP_037308317
LinkDB
All DBs
Position
6:21882539..21889429
Genome browser
AA seq
691 aa
AA seq
DB search
MQMEAMEVDSPGEVQAGGGPRQRAVNAASDADAPHVISDSGSSSTEVDDDEEGGRQTAAP
PRLPATWAFSQRAASSSAAPSTARRIRRRLRQGLRVHYPSQTAASSRGFPDFLLRAPAAG
AAEPESGSTTELSESEGEEGGPGGGLPAAPGAIDPPPAAGPAVSAAVQPPRLQEVAPTDS
RSAAGGHGTEASNQNVQAVPSQVTQTSEEGDVCSICFEAWTTAGEHRLSALHCGHLFGST
CIQRWLVAQGSSAKCPQCNKKAKRSDIVLLYASKLRALDNSEQETLKRSLEQEQSLRRKA
ELESAEYKLKLQVVNNKYGQAQQELQELRSLMAGRSSLSSGSSGPGCRASQYGFSKAVLV
SQTGGSRVLSYCGALGCLLASQPSPHATLVPGCGVKKVSVANMKTSQYVPIHAKQIRGLC
FNRQNDSLLLSAALDNTLKLTSLLTNTVVQTYNAGKPVWSCCWCLDNSNYVYAGLSSGSV
LVYDTRDTSTHVQELQPLRSKCPVASLCYVPRATSSAFPCGGLIAGSLEAACFWEQVNEA
TYRPHALPLETTGCTDIQVETESRHCLVTYRPGRSHPTLRCVLMALTRTPQQDSAQLPSC
SYSPVQTFGAGSSCKLLTKNAVFKSPQGGGTLVAAGDEASNSTMVWDAASGSLLQKLPAD
LPVLDISPFSVNGEHFLASLTEKMLKLYRWE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcagatggaggccatggaggtggactccccaggggaggtgcaggcaggaggaggccca
aggcagcgcgcagttaatgcggcatcggacgccgacgcgccgcacgtcatctcggactcc
ggcagcagcagcaccgaggtggatgatgacgaggaaggggggcggcagacggcggcgccc
ccccggcttcctgccacctgggccttcagtcagcgagcggcgagcagctcggcggccccg
tcgacagcgcggcgcatacggaggagactcaggcagggcctcagggtgcactaccccagc
cagaccgccgcgtcctcccgcggcttcccggacttcctgctgcgggcgccagccgccggc
gcggccgagccggagtccggcagcaccaccgagctcagcgagtccgaaggcgaggagggc
ggacctggtggaggcctgcccgctgcgccgggggccatcgacccgccgcccgccgccggt
cctgctgtcagcgccgccgtccaaccgccccggctgcaggaagtcgctccgaccgactcc
aggtcagctgcaggtggccacgggacagaagcttcaaaccagaacgtccaggcggttccc
tcacaggtcacccagacttcggaggaaggcgacgtctgctccatctgcttcgaggcgtgg
accacggcgggcgagcaccggctgtccgccctgcactgcggtcacctcttcggctccacc
tgcatccagcgctggttggtggctcagggttcgtccgccaaatgcccacagtgcaacaag
aaggcgaagcgttcggacatcgtgctgctctacgcttccaagctgagggcgctcgacaac
tctgagcaggagaccttgaagaggtctctggagcaggagcagtctctgcggaggaaggct
gaactggaatcagcggagtacaaactgaagctgcaggtcgtcaacaataaatacggacaa
gcacaacaagagctgcaggagctcaggtctctgatggccggccgcagctcgctctcctcc
ggctcctcgggccccggctgcagggcgtcccagtacggcttctccaaggcggtgctggtg
tcccagaccggaggctccagggtcctgtcctactgcggagcgctgggctgcctgctggcc
tcgcagccgtcgccgcacgccaccctggtaccaggttgtggcgtgaagaaggtgagcgtg
gccaacatgaagacgagtcagtacgtccccatccacgccaaacagatccgaggtctgtgc
ttcaaccggcagaacgacagcctgctgctgtcggccgctctggacaacaccctcaagctg
accagtctgctgaccaacacggtggtccagacctacaacgccgggaagcccgtgtggagc
tgctgctggtgtctggacaacagcaactacgtgtacgcgggtctgagcagcggctccgtg
ttggtgtacgacacccgagacaccagcacgcacgtgcaggagctgcagccgctgcgctcc
aagtgtcccgtggcgtcgctgtgctacgtcccgcgggcgacgtccagcgcgttcccctgc
ggcgggctgatcgccggctccctggaggccgcctgcttctgggagcaggtcaacgaggcc
acgtaccggccgcacgcgctgccgctggagaccacgggctgcaccgacatccaggtggag
acggagagccgccactgcctggtcacctacaggccagggcgctcccacccgaccctgcgc
tgcgtcctgatggcgctgacccggaccccccagcaggactccgcccagctgcccagctgc
tcctactcgcccgtccagacgttcggcgccggctcgtcctgcaaactgctcaccaagaac
gccgtgttcaagagcccccaagggggcgggaccctggtcgccgccggcgacgaggcgtcc
aactccaccatggtgtgggacgcggccagcggctctttgctccagaagctcccggccgac
ctgccggtgttggacatcagcccgttctctgtgaacggcgagcacttcctggcctcgctg
acggagaagatgctgaagctctacaggtgggagtga
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