Pungitius pungitius (ninespine stickleback): 119196640
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Entry
119196640 CDS
T07626
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119196640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119196640
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119196640
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
HECT type E3
119196640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
119196640
NCBI-ProteinID:
XP_037308368
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All DBs
Position
6:complement(6461855..6471457)
Genome browser
AA seq
1020 aa
AA seq
DB search
MFSWGQDAHRGFRLKDGAKRDSGPATDSGLRRLELGYRLAGLSAGRSALAFVKTNGNAFV
VVKKQSGGGKQKFVKCKEKIQAVGCHGDGNEVMVLLLSEEGKLFCVDTHAYNPKPLEALC
NIPVSQVACGSQHSVALTKGGQVYTWGQNSRGQLGLGSSETCTDSPRRLGGLSALPLVQV
AAGGEQSFALCVSGAVLGWGRNHRGQLGLGDTTDRHTATAVHCLNKKSTIHISCGKDHTA
ILTKNGDVFTFGSGQYGQLGHNLFGDELRPRLVAELWGAKVTKIACGWHHTLALTESKRV
YSFGCGEQGQLGHGKESHPSVPLPVQLLQVATDAQIGNIFAGENCSFATCAPTEGVHEEA
SDDAIGIKTQRRLTDMIDKWTLEYDSKTWKKIKKKCLHREIHRTFSSASCLNTIFLEQSK
DKHFQTSPKYSGLNLSVARLSFEKLVKRDNVFAEVEASLLDLLPSLNKKPLAVEGLRIYL
LLNELLFVIQRHKRDGASTTLAKAVAASLLNLSVDSLQVIGDWWSSLPLSTMVEHVNVWK
QALSAMLSSMSVSHYFGARNLVLVLQHMYNVNSRTAEPQKMPETDFCLLIDKKFLQEDLC
LWILTELKFVFHPFQSFPSQPLILCRFPFLMDLQSKKFVFDLHADSSRMRAEMPHMFCWF
AQPLSFDLTLSRASILDDTFEQLSGVNPEEYKLPLLIYFEENDIVENDLNLYKKDFFHEV
FHEMMSAESGMFMFNDSKTLAWFPSKATEVDERYFYFGVLCGLALYNRCIIHLPFPLALF
KKLIGVKPSLSDLIEFSPCVGESLLNILEDYEDDDIQNLYMDFVIHWDDKEVDLDTKNPG
KPLTGQNKKEFVDAYVNHAFNTSVDGVFQDFKQGFFQVCNQDLVKLFRPEELQEVLVGKD
FHDWEKLKQNTGYEGVYSTTPPHPTIQMFWEVFDELTEDQKRAFLWFLTGSERVPILGLD
KIKMTVRVQEVEDLCYDEYYPETHTCFSILELPKYSNKEIMHTKLTEAMSSNRKIYSDCI
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgtggggacaggacgctcaccggggcttccgcctcaaagacggggcgaaacgt
gacagcgggcccgccacggactccgggctccgccgtttggagctcggttaccgcctcgcc
ggtctgtccgcgggccgcagcgcgctcgccttcgtcaaaaccaacgggaacgcgttcgtc
gtcgtgaagaagcagagcggaggcgggaagcagaagtttgtgaagtgtaaagagaagatt
caggccgtgggttgccatggtgatggtaatgaggtgatggtcctgctgctgtccgaggaa
ggaaagcttttctgtgtggatactcacgcttacaatccaaagcccctggaagctctttgt
aacatacccgtgtctcaggtggcttgtgggagccagcactcagtggccctcaccaaaggt
ggtcaggtgtacacatggggccagaactccaggggccagctgggtctggggagcagtgag
acctgcaccgactcgccccgacgcctggggggtctgtcagcgctccccctggtccaggtg
gcagcagggggagagcagagcttcgccctctgcgtctccggggccgtgttgggctggggc
cgaaaccaccgcgggcaactcgggctaggggacacaacggaccgacacacggcaactgct
gttcattgtctgaacaagaagtccaccattcacatttcctgcggaaaggaccacactgcc
attctgacaaagaatggtgatgtcttcaccttcggctctggtcaatatggacagcttggg
cacaacttatttggcgatgaactacgacctcgcctggttgcagagctctggggggcaaag
gtcaccaagattgcttgtggatggcatcacacattagcgttgacagagtcaaagagggtt
tattccttcggctgtggagagcagggccagctgggccacgggaaggagagtcatccgtct
gtgccactccctgttcaactgctacaagtcgcgactgatgctcaaattggaaacatcttt
gcaggggaaaactgttcgtttgcaacgtgcgcacctactgagggcgttcacgaggaggcg
agcgacgacgccatcggcatcaaaacacagcgtcgtctcacggacatgattgacaaatgg
acccttgaatacgattcaaaaacatggaaaaaaatcaaaaaaaaatgtcttcacagggaa
atccacaggacgttctcctccgcttcctgtctcaatacaatcttccttgagcagagcaaa
gacaaacatttccagacttcaccaaagtattcaggcttgaatttgtcagttgcacgactc
tcttttgagaaattggtgaaacgggacaatgttttcgccgaggttgaggcttctctcctt
gacttgcttccttcccttaataagaagccattggcagtggaggggttgaggatctacctg
cttctaaatgaactcttgttcgtgatccagaggcacaaacgggatggagcgagcacaact
ctcgccaaggcggttgcggcttccctcctaaacttgtctgttgacagtctccaggtcata
ggggactggtggtcctcactgccgctgtccaccatggttgaacatgtaaacgtgtggaag
caggccctctcagcgatgctgtcctcaatgagtgtttctcactactttggagccagaaac
ttggtgctggtcctccagcatatgtacaacgtcaacagcaggacagcagaacctcaaaag
atgccagaaactgacttctgtttgttgattgacaaaaagtttctccaggaggatctgtgt
ctttggattcttacagaactcaagtttgttttccatccttttcagagctttccttcccag
ccacttatcctgtgtcgctttccatttctgatggatctccagtcaaagaaatttgttttt
gacttgcatgctgatagcagcaggatgagagcagagatgcctcatatgttttgctggttc
gcccagcctttgtcctttgacctaaccctgagtcgagcatccatcctagatgacaccttc
gaacaactatctggtgtgaatcctgaggaatacaagttaccacttctgatttattttgaa
gagaacgacatagttgaaaatgatcttaatctctacaaaaaggacttttttcacgaagtg
tttcacgagatgatgtcagctgaatctggcatgtttatgttcaacgactccaaaacactg
gcatggttcccctccaaagcaacagaggtggacgagagatacttctacttcggagttctg
tgtggattggctttgtacaaccggtgcatcatacacttacccttcccactggcactgttc
aagaagctaatcggtgtaaagccatcactcagtgacttgattgaattcagcccgtgcgtt
ggagagagtctgctgaacatcctggaagactacgaagatgacgacatccaaaatctctac
atggattttgtcattcactgggatgacaaagaagttgaccttgatactaaaaatcctgga
aagccactgactgggcaaaataagaaggagtttgtggatgcctacgtgaaccacgccttc
aacacatcggtagatggtgtgtttcaggatttcaagcaaggcttcttccaggtgtgtaac
caggatttggtgaagctgttccgaccagaagagctgcaggaagtgctggtgggcaaagac
ttccatgactgggaaaagctgaaacagaacactggttatgagggggtgtacagtactaca
ccacctcaccccaccatacagatgttttgggaggtttttgatgaactaactgaggatcag
aagagagcgtttctttggtttttgactggctctgaaagggttcccattcttggcctggac
aagatcaagatgacagtcagagtccaagaagttgaggacctctgctatgacgagtactac
cctgagacacatacatgtttctcaatcctggagctgcccaagtactccaacaaggagatc
atgcacaccaagcttacagaggccatgagcagcaatagaaaaatctactctgactgtatc
tga
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