Pungitius pungitius (ninespine stickleback): 119196664
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Entry
119196664 CDS
T07626
Symbol
det1
Name
(RefSeq) DET1 homolog
KO
K10571
de-etiolated-1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119196664 (det1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119196664 (det1)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119196664 (det1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
119196664
NCBI-ProteinID:
XP_037308447
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All DBs
Position
6:6232389..6239054
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AA seq
551 aa
AA seq
DB search
MDEDTPTLKPRRIQNQNVVHRLERRRICSGRPGAHWYRVRCFHQNLFPNFTVVNVEKPPC
FLRKFSPDGRCFIAFSSDQTSLEIYEYQGCQAAQDLLRGQEGETLLTANDQRSLNIRGRL
FERFFSLLHVTNVASNGEHLNRECSLFTDDCRYVIVGSAVYVPEEPPPYFFEVYRNNESV
TPNPRSPLEDYSLHIIDLHTGRLCDTRSFKCDKIILSHNQGLYLYRNILAVLSVQQQTIH
VFQVTPEGTFLDVRTIGRFCYEDDLLTLSAVYTEAQTESQPGFPRLYTDKTINSLKHRLL
VYLWRRAEQDGSATAKRRFFQFFDQLRRLRMWKMQLLDEHHLFIKYTSEDVVTLRVTDPS
QPSFFVVYNMVSTEVLAVFENTSDQLLELFENFCDLFRNATLHSQAVQFPCSASSNNYAR
QVQRRFKDTIVNAKYGGHTEAVRRLLGQLPISAQSYSSSPYLDLSLFSYDDKWVSVMERP
KTCGDHPIRFYARDSGLLKFKIQAGLLGRPVNHTVRRLVAFTFHPFEPFAISVQRTNAEY
VVNFHMRHVCA
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagacaccccgaccctgaagcccaggcggatacaaaatcaaaacgtagttcat
cgcctcgagaggcggaggatctgttcgggccgacccggagctcactggtacagagtacgg
tgcttccaccagaaccttttccccaacttcaccgtggtcaacgtagagaagcccccctgc
ttcctccgaaagttctcgccagatggccgatgtttcattgccttctcttctgaccagact
tctctggagatatacgaatatcaaggctgccaagcggctcaggacctgctgagaggccaa
gagggagagactctcctaacggccaatgaccagcggtccctcaacatccgaggccgcctg
tttgagcgcttcttctcgttgctccacgtcacaaacgtggcctcgaacggggaacacctc
aaccgggagtgcagcctcttcacggacgactgccgctatgtgatcgtcgggtcggccgtg
tacgtcccagaggagccgccgccttacttctttgaggtgtatcgcaacaacgaatctgta
actcctaaccctcggtctcctctggaggactactcgctccacatcatcgacctccacact
ggcaggctgtgtgacaccaggtccttcaagtgtgacaagatcatcctgtcccacaaccag
ggcctctacctctacaggaacatcctggctgtgctgtcggtccagcagcagaccatacac
gtgtttcaggtcactccagagggaacgtttctcgatgtccggaccattggacggttctgt
tatgaggacgacctcctgaccctttcagcagtctacacggaggcccagaccgagagtcag
ccgggcttcccccgcctttacaccgacaaaaccatcaactccctcaagcacaggctgctg
gtctacctgtggaggagggctgagcaggacggcagcgccaccgccaagaggagatttttc
cagttttttgatcagctgaggaggctgaggatgtggaagatgcagctgttggatgagcat
caccttttcattaaatacaccagcgaagacgtggtcacactgagagtcaccgacccctcg
cagccgtcgttctttgttgtgtacaacatggtgtccacagaggtgctggccgtctttgag
aacacctccgatcagctgctggaactttttgagaatttctgtgacctgttccgaaacgcc
acgctgcacagccaggccgtccagttcccctgctccgcctcctccaacaactacgcccgc
caggtccagagaagattcaaggacaccatcgtgaacgccaaatacggcgggcacacggag
gcggtgcggcggctgctgggtcagctgcccatcagcgcccagtcctacagcagcagtcct
tacctcgacctctccctcttcagttatgatgacaagtgggtgtccgtgatggagaggccc
aagacctgcggagatcaccccatcaggttttacgcgcgggactccgggctgctgaagttc
aaaatccaggccgggctgctggggcggccggtaaatcacaccgtgcggcgcctggtcgca
ttcaccttccaccccttcgagcccttcgccatctccgtgcagcgcaccaacgccgagtac
gtggtcaacttccacatgaggcacgtctgcgcgtga
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