KEGG   Pungitius pungitius (ninespine stickleback): 119196724
Entry
119196724         CDS       T07626                                 
Symbol
poc1b
Name
(RefSeq) POC1 centriolar protein homolog B
  KO
K16482  centriolar protein POC1
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ppug03036]
    119196724 (poc1b)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ppug03037]
    119196724 (poc1b)
Chromosome and associated proteins [BR:ppug03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    119196724 (poc1b)
Cilium and associated proteins [BR:ppug03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   119196724 (poc1b)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_EML Beta-prop_WDR75_1st NBCH_WD40 ANAPC4_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_SPT8 Ge1_WD40 Beta-prop_DCAF4 Beta-prop_IP5PC_F Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_2nd Beta-prop_VPS8 Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 119196724
NCBI-ProteinID: XP_062418987
LinkDB
Position
6:complement(21117213..21120515)
AA seq 451 aa
MSSVMEDPALERHFKEHKDAVTCVDFNPNCKQLASGSVDKSLMIWNLAPKARAFRYVGHQ
DSITGVQFSPSGDLVATSSKDRTVRLWTPSTKAASTAFKAHTAAARSVSFSPDGLRLATA
SDDKSVKVWSVHRQSFVCSFTQHTNWVRCARFSPDGRLIASCGDDGTVRLWDTSTKRCIN
CFTYHGGSETFVGFNSSGTCVASSGADSSLKVWDLRTNKLIQHYQVHSAGINSFSFHPSN
NYLISGSSDGTVKILDLLEGRLIYTLHGHNGAVLTVVFSRAGELFASGGAGGQVLMWRTN
FDTKSYQNVLQQHSRRSTPDPPPHVADIHPRGPHLHLPKASAIQISPAVADTRSTDPLVV
EFGRSAVSRQRDATVAETHATRLPLGVGGKIYYTQSWKRENPIEMVLWRKFYKCIKNMKT
TQQRKKSRKRKFQVHAAATRWQYRPRVCSRV
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgtcgtctgttatggaggatccagctctggagagacacttcaaggaacacaaagatgcc
gtcacctgcgtggacttcaatccaaactgcaaacagctggcctcggggtcagtggacaag
agcctgatgatctggaatctggctccaaaggcgagggccttccgctacgttggccaccaa
gactccatcaccggcgtgcagttctccccctccggtgacctcgtggccacgtcctccaag
gacagaacggtccggctgtggaccccttccacgaaagcggcgtccacggcgttcaaggcg
cacacggccgccgcccgcagcgtgtccttctcccccgacggcctcagactggcgacggcg
tccgacgacaagtccgtcaaggtgtggagcgtccaccggcagagcttcgtctgctccttc
acccagcacaccaactgggtgcgctgcgccaggttttctcctgacgggcgtctcatcgcg
tcctgcggggacgacggcaccgtccggctgtgggacacgtccaccaagcgctgcatcaac
tgtttcacgtaccacggaggaagcgaaacgtttgtcggtttcaactctagcggcacctgc
gtggcgtcctcgggggccgacagttccctgaaggtctgggatctacggaccaacaagctg
attcagcattatcaagtccacagtgcgggaatcaacagcttctccttccacccgtccaac
aactacctgatcagcggctccagtgacggcaccgttaagatcctggacctgctggagggc
cgcctcatctacacgctgcacggacacaacggcgctgtattgactgtagtgttctccagg
gcgggagagctctttgcctcggggggagccggcggtcaggtcctgatgtggaggacgaac
tttgacaccaaatcctaccagaacgtcctgcagcaacacagccggaggtccaccccggat
cccccgccccacgtggccgacatccaccccagaggaccccacctccacctccccaaggcc
tcagccattcagatcagtccggcggtggcagacactcggtccaccgatccgctcgtcgtg
gagttcggccgatcagcggtaagccggcagagggacgccaccgtcgcagagacacacgcg
acccgactcccactcggggtaggtgggaaaatctattacacacaatcctggaaaagggaa
aatccaattgaaatggttttatggagaaagttctacaaatgcatcaaaaacatgaaaaca
acacaacaacgtaagaaaagccgcaaaaggaaatttcaagttcacgctgcggccaccagg
tggcagtacagacctcgtgtctgcagcagggtgtaa

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