Pungitius pungitius (ninespine stickleback): 119197005
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Entry
119197005 CDS
T07626
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ppug00535
]
119197005
Proteoglycans [BR:
ppug00535
]
Extracellular matrix (ECM) proteoglycans
Others
119197005
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
VWA_3
Motif
Other DBs
NCBI-GeneID:
119197005
NCBI-ProteinID:
XP_062421386
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Position
11:complement(9688003..9756707)
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AA seq
1314 aa
AA seq
DB search
MKARWNSVEGVSGYMLLYAPLTDDGDVVEKEVLDTVTELELDGLTPLTEYTVTVYAMYGK
EASDPMINKKSTLPLSPPTNLQFSDITHNSAHISWAPVPRGVKGYQIVWIKTDGLVREEV
ELGPDNLYDLSELTSLMEYSVAIFALYKEGQSEALTDRFTTTPVPGPLDLRPSNVGTDSF
QVSWDHSANDIVLYRLSWAPFTGGDTKEVVLSGIDNRYTLTGLSPSTEYEAMLTAVFKDE
SESDTVSVIETTLAETTTIATTATRQTVRNLLLRDETTQSMEASWELQDPHVESYRVSYA
GLRGNRREESVLVPGVQMRAVLQPLLPDTQYKVTVTPVYTDGQDGISVSALGFTLPLLSP
GNLRVSEEWYDRFRVTWDSPESPTVGYRIVYQPINVPGPFSETTVGDNVNSMLLLSLLSG
TEYSVQVTASYPTGQSEPLLVNAKTLFLGVSGMSTYQVRPNSLCVQWQPLLRATLYRVSI
QSTLNGQRQEVSLGGGASRQCFYDLTPSSQYQISIHTQLQQMEGPSVSITDMTLPVPTQA
PRELPTTEPPPTIPPAKEVCREAKADLAFLVDGSWSIGDDNFMKITRFLYSTMGSLDLIG
PDGTQVAIAQFSDDARTEFQLSSHGNKEALLEAIQRIRYKGGNTKTGRAIKHVKESIFIP
EAGARRGVPKVLVVLTDGRSQDDVNKVSKEMQMDGYIIFAIGFADADYGELVNIASKPSD
RHVFFVDDLDAVKKIEEQLITFVCEAATATCPSVLMSGNTMAGFHMMEKFGLVEKEYSTI
AGVSLEPGSFNSFPCYRLHRDALVSQPTKYLHPEGLPSDYTISMMLRLLPETPEEPFALW
EILNKDDEPLVGLILDHSGKTLTFFNHDYKGHFQTVTFEGTEIKKIFHGSFHKLHVTISK
TAVKVVLDCSEVGEKSVSAAGNITTDGVEILGRMIHSRGRRHNSAPFQLQMFDIICSTSW
ASRDKCCELPALRVEEQCPSMPHACTCSQESKGPPGPSGPPGGPGIRGARGDRGESGVTG
PQGPVGEIGPSGPSGPPGPQGPSGLSIQGPPGAAGGKGERGEIGPAGQMGVPGSSGSPGR
DGPPGARGLPGNSGPQGTQGPPGPVGAPGAPGAHGPVGSAGTEGDQGLPGPSGTKGDKGE
RGDVQSQAAVRAIARQVCEQLIQSHLSRYNSILNQIPVQSATSVRTVPGPPGEPGRRGSP
GPQGEPGPAGRPGFPGASGQNGRPGERGLLGEKGERGSPGIGSQGPRGQSGPPGLPGEGR
TGSQGPPGRPGNPGTPGRSGNPGAPGAAGPPGYCDQNSCLGYNVGVQQDYGNDY
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaagatggaacagtgtggagggagtttctggctacatgctgctgtatgcacca
cttacagatgatggagacgtagtcgagaaagaggtgctggacacagtgacagagctggag
ctcgatggattgacccctctcaccgaatacaccgtcactgtttatgccatgtacgggaag
gaagctagtgaccccatgataaacaagaaatctacattaccactgagtccccccactaac
ctccagttctctgacatcactcacaactccgcccacatcagctgggcccccgttcccaga
ggagttaaaggttatcaaatcgtgtggatcaagacagacggactggtcagggaggaggtg
gagttgggtccagacaacttgtatgatctcagtgaattgacgtctctgatggagtattca
gtggctatctttgccctgtacaaggagggccaatcagaggcactcacagaccggttcact
accactccagttccaggtccattggatctacgccccagtaatgtcggcacggacagcttc
caggtcagctgggatcactcagccaatgacatcgtcctctacagactctcctgggcaccg
ttcacaggtggcgacacaaaggaagttgtcctgagtggaatcgataaccgatacacgctg
actggtctgagtccatcgactgagtatgaagcgatgttaacggctgtattcaaagatgaa
tccgaaagtgataccgtctccgtcatagagaccacgttggccgagacaacaacgattgct
accacagcaacacgtcagaccgtgagaaaccttctgctgcgtgacgagaccacgcagagc
atggaggcctcatgggagctgcaagacccccacgtggaaagctacagggtctcctacgct
ggcctcaggggcaaccgccgagaggagtcggtgttagttcctggtgttcagatgagagca
gtacttcagcctttactaccagacacccagtacaaagtgacagtcacaccagtgtacacg
gatggacaagacggcatcagcgtctcagcgctcgggttcacattgcctctcttgtctcct
ggaaacctacgtgtgtcagaggagtggtacgatcgcttcagggtcacctgggattcacct
gagtcgcctacagttggttacaggattgtataccagcccatcaatgtcccaggaccattt
tcggagaccacagtgggtgacaacgtgaactccatgcttcttctgagtctactaagtggg
acggagtacagtgttcaagtgacggcttcctaccccacaggacagagtgaaccactgcta
gtcaatgccaagacattgttcctcggtgtctctggtatgtcaacctaccaggtgcgtccc
aacagcctttgcgtccaatggcagccccttctgcgtgccaccttgtacagagtctccata
cagtctacgctcaatggtcagagacaggaagtgagcctaggaggtggtgcttcacgacag
tgcttctatgacctcacccccagcagccaataccagatcagcattcacacccagctgcag
caaatggaaggaccttctgtttccatcactgacatgacactgccagtgcccactcaagcc
ccgagagaactccccaccacagagcccccacccacaatcccccctgctaaagaagtgtgt
agggaggccaaggcagacctggcgttccttgtcgatggttcatggtccatcggagacgat
aacttcatgaagatcacacgttttctctacagcaccatgggatcactggatctgatcggc
ccagacggtacccaggtggccatcgctcagttcagcgacgatgctcggacagaattccag
ctgagttcccatggcaacaaagaagcgctgctggaagctatccagaggatcagatacaag
ggaggaaacacaaagacaggtcgagccatcaaacatgtgaaggagtctattttcatcccg
gaggccggagcaagacgcggcgtgcctaaagtcctggttgtcctcactgatggacgttcc
caagatgatgtcaacaaagtgtcgaaggagatgcagatggacggatatatcatctttgcc
attggctttgcggacgctgactacggggagctggtgaatattgccagcaagcccagtgat
agacacgtcttttttgtggacgatttggatgccgtgaagaaaatagaagaacagctcatt
acttttgtctgtgaggccgccactgccacttgtccatcggttttgatgagtggcaacaca
atggctggtttccacatgatggagaagtttggcctagtggagaaggagtacagcaccata
gccggcgtttctctggagccgggttcattcaacagcttcccctgttacagattgcaccgt
gacgccctggtgtcccagcccaccaagtaccttcatccagaaggtttaccatctgactac
accatttctatgatgctgcggctgcttcctgagaccccggaggagccctttgcattgtgg
gaaatcctcaacaaagacgacgagccattggtcggacttatcctggaccactctggaaag
accttgaccttcttcaaccacgactacaaaggacactttcagactgtcacttttgaagga
actgaaataaaaaaaatcttccatggcagcttccacaagcttcatgtaaccataagcaag
acagccgtgaaggtggtgctagattgttctgaagttggggagaaatctgtcagtgctgct
ggtaacatcactacggatggagtagagatcctcggaaggatgattcactccagaggcaga
cggcacaactctgctccattccagctccagatgtttgacatcatctgcagcacttcgtgg
gccagcagagataagtgttgcgagctgccggccttaagagttgaggagcagtgcccctca
atgccgcatgcctgtacctgttcccaggagagcaaagggcctccaggaccttccggaccc
cctggcggtccaggcatacgaggagccagaggagatcgaggagagtcaggggtgacggga
cctcaaggaccagtgggagagatcggcccttctggaccctcagggccgcctggtcctcag
ggacccagtggtctctccattcagggaccaccgggtgctgcggggggaaagggagagcga
ggagagattggtccagccgggcaaatgggggttcctggaagctcaggctcccccgggaga
gatggccctccaggagcaaggggtctgccaggtaatagtggaccacagggaacacaaggg
cctcctggacctgttggagcaccaggagcaccaggagctcacggacctgttggttctgca
ggcactgaaggagatcaaggacttcctggtccttctggtaccaaaggtgataagggagaa
agaggtgatgtgcaatcccaagctgctgtgcgtgcgatagcacggcaagtgtgtgagcag
ctcatccagagccacttgtctcgctataactccatactgaaccagatccccgtccagtca
gcaacgtcagtccgaacagtaccaggaccacccggggagccggggaggagaggctccccc
ggcccccagggagagccagggccagccggcaggccgggcttccccggggccagcggccag
aacggacgtcctggagagagaggtcttttgggagagaagggagagagagggagcccagga
attggaagtcagggacccagaggacaatctggacctccaggcctgccaggcgagggacgg
acaggcagccagggcccccccgggcggcctggtaaccctggaacaccggggaggtcgggg
aatccaggggcccccggagccgccggcccgccagggtactgtgaccagaactcctgtctg
gggtacaacgtcggagttcaacaggactatgggaatgattactga
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