Pungitius pungitius (ninespine stickleback): 119197007
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Entry
119197007 CDS
T07626
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119197007 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119197007 (dis3l)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
119197007 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
CSD2
Rrp44_S1
OB_HELZ2
GFO_IDH_MocA_C3
DUF7853
Motif
Other DBs
NCBI-GeneID:
119197007
NCBI-ProteinID:
XP_037308770
LinkDB
All DBs
Position
4:25442493..25448804
Genome browser
AA seq
1049 aa
AA seq
DB search
MKKTEKVLHLKSCRGRKLRVVREHYLRERVPCYSGLCEAGCDNTGGRVLPGDLTHYVVPD
VGVVLDYLEILEFRELQGVVFTQTACQALQLAKGRRQFNRLRNLLKDPRHHCVLFANEFQ
EDSYCPREKGEKQEEWQTRCVYSAAVWYYNHLAGMKDVVMITEDQEAVARYGSLTCGVYV
ISLQDFLLNFLPELTAARDLYAAVSQALQEKESEVTEKEFAEHLPAEVLEAGIKSGRYVQ
GTLNVSRHRAHSEASVTADGLSNKNSDLSCGVLVCGAKNRNRAVHGDVVAVELLPRSEWR
GRTTALTEGQGGGDEKSGEDADRKPMPTGRVVGVLQRNWRDYVVTFPPREGAQPQSRSSQ
RLLAVPWDHRVPKIRVSSTQADALQDHRVVVRIDSWESSSLYPNGHSVRVLGRAGELETE
VQTILIENGIHVPPFSDAQLRELPASSPERPWAVDPAQVARRRDLRRSHLVFSIDPLGCE
DVDDALSVRRLAGGTLLELGVHIADVTHFVAEGSLTDLEARARATTYYLADRRYDMLPPV
LSADLCSLLGGVDRYAMSVLWELDAQTLSVQKVWYGRTLVRSSYQLHYELAQALLDGGGA
EVPELEGLGPEETEARLAELKGALETLTRVARHLRAQRDRGGALELEGVEVRAQLDEQRN
ITALVPREPLEVHETVAECMIYANHWVARKIQEAFPHQALLRRHPPPRQEFFSQLVESAA
ARGFTVDTRTNKALADSLDRAVDPQDPLVNRMLRIMATSAMSQAVYFSTGLQSQDQFYHY
GLALDRYTHFTSPIRRYADVVVHRLLTAAIDVDEGRDPSTAVAGNKDLEETSRHINTKNR
ASQQAQKLSTELFQCLYFKERDPQSDRRCLADAVIYSIRDNGVLVFVPEYGVKGPVYMKN
REGQVVAPGEGGLCEWQSGAVRRHSDHISTTSSCGTSTFRLFDHITVCVSVRSTHCHADA
LHLELVSNRPHRGAEPKRPGPQGRSQLVQEVVRLAEEASQQKARRPKLSREEREFSQSKT
PNLYSLLEEVRELALLDLDAMSRVAAATA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaccgaaaaggttctgcatctcaagagctgccggggccggaagctgcgtgta
gtgcgcgagcattacctgcgcgagcgcgtcccctgctacagcggcctgtgtgaggcgggc
tgcgacaacaccggaggcagggtgctgccgggggacctgacccactacgtggtgccggac
gtgggcgtggtgctggactacctggagatcctggagttcagggagctgcagggcgtcgtc
ttcacgcagaccgcctgccaggcgctgcagctcgccaaaggccgcaggcaattcaaccgt
ctgcgaaaccttctcaaagaccctcgacaccactgtgtgctcttcgccaatgagttccag
gaggattcgtactgtccgcgggagaagggggagaagcaggaggagtggcagaccaggtgt
gtgtactctgctgcggtgtggtactacaaccatctggccggtatgaaggacgtggtgatg
atcacggaggaccaggaggccgtggctcggtacggcagcctcacctgcggagtctacgtc
atctccctccaggacttcctgctgaacttcctgccggagctgacggcggctcgtgacctg
tacgccgccgtgtcccaggcgctgcaggagaaggagagcgaggtcacggagaaggagttc
gccgaacacctgcccgccgaggtcctggaggccggcatcaagtccggccgctacgttcag
ggcactctgaacgtcagcaggcaccgggcgcacagcgaagcgtccgtcaccgcggacggt
ttgtccaacaagaactcagatctgagttgcggcgtgttggtctgcggcgccaagaaccgc
aaccgggccgtgcacggcgacgtggtggcggtggagctgctgccgaggagcgagtggaga
gggaggaccacggctctgaccgaaggccagggggggggggacgagaagagcggggaggac
gccgacaggaagccaatgcccacgggccgcgtcgtcggcgtcctgcagaggaactggagg
gactacgtggtgaccttccccccccgagaaggagcccagccccagagcaggagcagccag
cgcctcctggccgtcccctgggaccaccgcgtccccaagatccgcgtcagcagcacgcag
gccgacgccctgcaggaccacagggtggtggtgcgcattgattcctgggaaagctcgtcg
ctctaccccaacggccacagcgtgcgcgttctgggtcgcgccggagagctggagacggag
gtccagaccatcctcatcgagaacggcatccacgtgcccccgttctccgacgcgcagctg
agggagctgccggcgagctcgcccgagaggccgtgggcggtggacccggcgcaggtggcg
cggcggcgggacctgaggcggagccacctggttttcagcatcgacccgctgggctgcgag
gacgtggacgacgcgctgtcggtgcggcgcctcgccggagggacgctgctggagctcggc
gtgcacatcgccgacgtcacccacttcgtggccgagggctcgctcaccgacctggaggcg
cgagccagggcgacgacgtactacctggccgaccggcgctacgacatgctgccgcctgtg
ctcagcgccgacctctgctctctgctggggggggtcgacaggtacgcgatgagcgtgctg
tgggagctggacgcgcagaccctgtccgtgcagaaggtgtggtacgggcgcacgctggtg
cgctcctcctaccagctccactacgagctggcccaggcgctcctggacggggggggggcc
gaggtgccggagctggaggggctcggccccgaggagacggaggcccggctggcggagctc
aagggggctctggagacgctgacccgcgtggcccggcacctccgggcgcagagggaccgg
gggggggcgctggagctggaaggggtggaggtgcgagcccagctggacgagcagaggaac
atcacggcgctggtcccccgggagccgctggaggtccacgagaccgtggccgagtgcatg
atctacgccaaccactgggtggcgcgcaagatccaggaggccttcccccaccaggccctg
ctgcggcgccacccgcccccccgccaggagttcttcagccagctggtggagagcgccgcg
gcccgggggttcaccgtggacaccaggaccaacaaggctctggcggactctctggatcgc
gctgtggacccacaggacccgctggtgaacaggatgctgaggatcatggccacttctgcc
atgtcgcaggccgtgtacttctccactggcctccagtcccaagaccagttctaccattac
ggactggcgctggaccgctacactcacttcacctcgcccatccgtcgctatgccgacgtg
gtggtgcaccgcctcctcaccgcggccatcgacgtggacgagggtcgtgaccccagcaca
gccgtggccggcaacaaagacctggaggagacgagccgtcacatcaacaccaagaaccgg
gcctcccagcaggcccagaagttgtccacagagttgtttcagtgtctctacttcaaggaa
agagaccctcagtcggaccggcgctgcctggcggacgccgtcatctactccatccgagac
aacggcgtgttggtgtttgtcccggagtacggagttaaggggccggtgtacatgaagaat
cgagagggtcaggtggtggcgcccggagagggcggtctctgcgagtggcagagcggcgcc
gtgcggcgtcactctgaccacatcagcaccacgtccagctgcggcacctccaccttccgc
ctgttcgaccacatcaccgtctgcgtctccgtgcgctccacccactgccacgccgacgcc
ctccacctggagctggtcagcaacaggccccaccgcggcgccgagcccaagcggcccggc
ccgcagggccgcagccagctggtgcaggaggtggtgcgtctggccgaggaggcgtcccag
cagaaggcccgccggcccaaactctccagagaggagcgggagttcagccagagcaagacc
cccaacctgtactccctcctggaggaggtccgggagctggctctgctcgacctggacgcc
atgtcgcgggttgccgcggcaaccgcgtga
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integrated database retrieval system
