Pungitius pungitius (ninespine stickleback): 119197039
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Entry
119197039 CDS
T07626
Symbol
tars2
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
119197039 (tars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppug01007
]
119197039 (tars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppug03016
]
119197039 (tars2)
Enzymes [BR:
ppug01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
119197039 (tars2)
Amino acid related enzymes [BR:
ppug01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
119197039 (tars2)
Transfer RNA biogenesis [BR:
ppug03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
119197039 (tars2)
Prokaryotic type
119197039 (tars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-GeneID:
119197039
NCBI-ProteinID:
XP_037308825
LinkDB
All DBs
Position
11:complement(14811641..14821583)
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AA seq
688 aa
AA seq
DB search
MAVTRLFRVIVGRTAARVHRRYSQVCPASSERLRIFESLRDKRCSDSRVEATGTPLSIQL
ADGRTVKGTAGVTTPLFVAQSVRVKGALVSKVNGELWELGRPLEADCELHLLGFDTDEGR
QVAWRTGACVLGGVLENEFGAEVCREGASELGLYCDHLLHTGAWSLGDVEERCKKAAALK
LPLSRLELNSEEVRELFQNSMLRLQLVEEQMNGPTITVYRCGDSIAVCKGPLLPHTGFLK
VFKTLQLSPVTLANQTESSGLMRLLGVAFPREKDKEQWEREQEEARRRDHRRIGTDQELF
FFNDVSPGSCFFLPKGAFIYNTLTDFIKSEYRRRGFNEVVTPTLYSTALWERSGHWEHYS
ENMFTVTAEGSQTYALKPMNCPAHCLMFEQRVRSWKELPLRWADFGALHRNELSGALGGL
TRVRRFCQDDAHIFCTPEQLEEEIGACLDFVRSVYQVFGFSFHCLLSTRPAPCLGDPEQW
DNAEQQLERSLQHFGERWELNPGDGAFYGPKIDILIKDAIGRQHQCATIQLDFQLPIKFD
LQYVGGDGQLRRPVMIHRAVLGSLERMIAILAENFGGKWPLWLSPAQVMVIPVGGNSESY
SKQVVQQFSEAGFMADLNDDLGATLNKKIRSAQLAQYNYIFVVGDKESESGAVNVRCRGG
VQLGRRPTEEVLTALTRLRDTRSNLEEF
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgacgcggctatttcgggtgatagtcggtcggacagcggctcgcgtgcacagg
aggtacagccaggtgtgcccagcttcatctgagcgactgcggatctttgagtccctcagg
gataaacgctgcagcgacagcagagttgaagctacaggaactccgctcagtatccagctg
gctgatggccggaccgtgaagggaacagctggtgtcaccacacctctctttgttgcgcag
agtgtgcgtgtgaaaggagctctggtgagtaaagtgaatggggagttgtgggagcttggg
cggcccctagaggccgactgtgagctgcaccttctgggctttgacacagatgagggaaga
caggtggcatggcggacaggagcctgcgtcctaggtggagtgttggagaatgaatttggg
gccgaggtttgcagagaaggggcgtcagagctcgggctttactgtgaccatctactacac
accggtgcctggtctctgggcgatgtggaagagagatgtaagaaggctgcagccctcaag
cttcctctgtcccgactggaactgaactcggaagaggtccgagagctcttccagaacagc
atgctgagacttcagctcgtagaggagcagatgaacggtcccaccatcacagtctacagg
tgtggagacagcatagcggtctgcaaaggccccctcctcccgcacacgggcttcctcaaa
gtgttcaagacactccagctgtcacctgtgaccctggccaatcagacggagtcctccggt
ttgatgcgtcttttaggtgtggcctttccaagagagaaggacaaagagcagtgggagagg
gagcaggaggaggcgaggaggagggaccacagacgcattgggacagaccaggagctgttc
ttttttaacgacgtgagtccaggaagctgctttttcttgcctaaaggagccttcatctac
aacaccctcactgacttcattaagagtgagtaccgaaggcgaggattcaacgaggtcgtg
accccgactttgtacagcacggcattatgggagcgctcgggtcactgggagcactacagc
gagaacatgttcactgtgacagcagagggctctcagacctacgctctcaaacccatgaac
tgtcctgcacactgtctgatgtttgagcagcgcgtccgctcgtggaaagagcttcctctg
cgctgggccgacttcggggcgctgcatcgcaacgagctctccggagcgctcggaggtctc
actcgagtacggcggttctgccaggacgatgctcacatcttctgcacacctgagcagctg
gaagaagagattggggcttgtttggactttgtgaggagtgtctatcaagtgtttgggttt
tccttccactgcctcctgtctacacgtcctgcaccgtgcctcggggaccctgaacagtgg
gacaatgctgagcagcagctggagaggagtctgcagcactttggtgagcgctgggagttg
aatccaggagacggcgccttctacggacccaagattgacattctgatcaaagatgccatt
ggcagacaacaccagtgtgccaccatccagttggacttccagctgcccatcaaatttgac
cttcaatacgtcggtggggacggacagttgcggaggccggtgatgatccacagagcagtg
ctggggtcactggagagaatgatcgccatactggccgaaaactttggagggaaatggccc
ctgtggttgtcgccggcgcaggtcatggttattcctgtggggggcaacagtgagtcatac
agcaaacaggtggtgcagcagttcagtgaagctggcttcatggctgatttgaatgatgat
ctgggagcaaccttaaataagaagatccgctctgctcagctcgcccagtacaactacata
tttgtggtgggagataaggagagtgaaagtggagcagtgaatgtgcggtgcagagggggc
gtgcagctggggagacggccgacagaggaggtgctgacagccctcacacggctacgagac
accaggagcaacctagaagagttctga
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