Pungitius pungitius (ninespine stickleback): 119197082
Help
Entry
119197082 CDS
T07626
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1-like
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119197082
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
119197082
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
119197082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
Ariadne
Ank
Ank_2
Ank_5
IBR_2
Ank_4
UBA_ARI1
Ank_3
zf-C3HC4_2
zf-C3HC4
zf-RING_2
Rcat_RNF216
zf-RING_UBOX
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
119197082
NCBI-ProteinID:
XP_037308945
LinkDB
All DBs
Position
11:1647960..1670343
Genome browser
AA seq
1110 aa
AA seq
DB search
MGNTATKFRKALVNGDDVLACHLYDSNPQFKEALDPNSTYGESYQHNTPLHYASRHAMAR
LLRSFLFGKDGNPNKRNVHNETSLHLLCMGPQILTSEGALQPRISRPYEDKQRRAESLQI
ILAWTGAKLDHGEYESADINATDNKKNTCLHYAAASGMKTCVEFLVQSGADLFAENEDRE
TPCDCAEKQHHKELALCLESQMVFSLAPEAEGIEAEYAALDRRELYEGLRPQDLRRLKDM
LIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSNAGQCCQRSGVQMPNPPPSGYNAW
DTLPSPRTPRVTRPSITSPDQVSLMPAEEESSLCGICMSSISVFEEPVEMSCGHEFCRPC
WEGFLNLKIQEGEAHNIFCPAFDCYQLVPVEVIESVVSREMDKRYLQFDIKAFVQNNPAI
RWCPEAGCEMAVRLSTQGSGTSTSDSLSFPLLRAPAVDCGKGHLFCWECQGEAHEPCDCE
TWKLWLQKVTEMRPEALAGVSEAYEDAANCLWLLSNSKSCANCKSPIQKNEGCNHMQCAK
CKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQQVEEQSKEMTEEVEKKHKSFQELDRFM
HYYTRFKNHEHSYQLEQRLLKTAKEKMEQLSRALSGLEEDPPDTTFIEDAVLELLKTRRI
LKCSYPYGFFLEPKCTKKEIYELMQTDLEMVTEDLAQKVNRPYLRTPRHKIIRAACLVQQ
KRQEFLASVARGVAPNDSPEAHRRSFAGGTWDWEYLGFASPEEYAEFQYRRRHRQRRRGD
MSSLRSNTPDPDDTSNSILDTQDVGGGRRHHLMSLGSLDDDDPNILLAIQLSLQDSAMAE
IGSNHDALANEASLGAIGTSLPSRLERSAPGAEVLSRASLSSSELLDLGANLARLGNIGT
SSQCSAASGASASVQHCDSHRRAFGASLPIPVGPGGGDSSTGLFSSSSDTLDSTTCGSHD
PSTSSAANANLLGNIMAWFHDMNPQGITLVPSTSSDTDGEGGEKGGGVLPDSTSGQRPRE
VTAEVGFFSQRPGDTEGKECAVAQRPTQLDLVGLDAVALPYAPTLDTGGDHGQRGGGSKV
CRVDTPQCDSVSDHLPSSSSSEWEDQVHLV
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggggaacacggcgaccaagttccgtaaggctctcgtcaacggcgacgacgtgctggcc
tgccacctgtatgacagcaacccgcagttcaaggaggctctggatcccaactctacatac
ggagagtcctaccagcacaacactccactgcactatgcttcccggcacgccatggcccgc
cttctcaggtctttccttttcggcaaagatgggaatcctaataaacgtaatgtgcacaat
gagacatctctgcaccttctctgcatggggccgcagatcctcacctctgagggggccctg
caacctcggatctcacggccatatgaagacaaacagcggcgggccgaatccctgcaaatc
atcctggcgtggaccggagcgaagctggaccatggagaatacgagagcgctgatatcaac
gccactgacaacaagaaaaacacctgcctgcactatgcggctgcttcaggcatgaagacg
tgtgtggagtttctggtgcagagcggagcagacctgttcgctgagaacgaagatcgcgaa
actccatgcgactgtgcagagaagcagcaccacaaggaactggccctgtgcctggagtcg
cagatggtcttctctcttgcccccgaggcagagggtatagaggcagagtacgcagccctt
gaccgaagagagctgtatgaaggcctgcgtcctcaggatctacggaggctgaaggacatg
ctgatagtggagacagccgacatgctgcaggcccctctcttcactgcagaggcactgcta
cgtgcccatgattgggacagggagaagctcctagaggcctggatgagcaacgcagggcaa
tgctgccagcgctcgggggtgcagatgcccaacccgcctcctagcggttacaacgcctgg
gacaccttgccctcaccccggacgccacgcgtcacccggccctccatcacttcccctgac
caagtcagcctgatgcctgccgaggaggagtcctctctgtgtggcatctgcatgtcttcc
atttccgtcttcgaggaaccggttgaaatgtcctgtggccatgagttttgcagaccatgc
tgggaagggtttctaaatctaaagattcaagagggggaagcccacaacatcttctgcccg
gcctttgactgctaccagctagtgcctgtggaagttattgagagtgtggtgtctagagag
atggataagcgctacctccagtttgacatcaaggcatttgtgcagaacaatccagcaatc
cgctggtgtcccgaggccggatgtgaaatggcggtgagactgagcacgcagggttctggg
acctccacctcagactctcttagctttcccctcctccgggctccagccgtagactgcggc
aaaggtcacctcttctgctgggagtgtcaaggcgaggcccatgagccctgtgactgtgag
acctggaagttgtggctccagaaagtcacagagatgagaccggaggcattggccggtgtg
agtgaagcgtatgaggacgcagccaactgcttgtggctgctgtcaaactccaaatcctgc
gccaattgcaagtctccaattcagaaaaatgagggctgcaaccacatgcagtgtgctaag
tgcaagtatgacttctgttggatctgtctggaggagtggaaaaagcacagctcatcaaca
ggaggctactatcgttgcactcgctacgaagtcatccagcaggtggaggagcagtcaaag
gagatgactgaagaggtcgaaaagaagcacaagagctttcaggaacttgaccgttttatg
cactactacacacgcttcaagaaccacgagcacagctaccagctggagcagcgcctgtta
aaaacagccaaagagaagatggagcagctcagtcgagccctgagtggattggaagaagac
ccacctgacactacgttcattgaagatgcagtcctagaactactaaagacacgccgcatc
ctcaagtgctcttatccttatggcttctttcttgagcccaaatgcacaaagaaagagatc
tacgagcttatgcagacggacctggagatggtgactgaggacctggctcaaaaggttaac
cggccttatctaaggacgccgcgccacaaaatcatccgtgcagcatgtctcgttcagcag
aagaggcaggagtttctagcctcagtagccaggggagtggcacccaatgactctcctgag
gcccacagacgcagttttgctggcggaacgtgggactgggaatatttaggctttgcatca
cctgaggagtacgcagagttccagtacagacggaggcacaggcagcggaggcgaggtgac
atgtccagtctccgtagcaacacaccggaccccgatgataccagcaacagcattttagac
acacaggacgttggaggtgggcgtagacatcatctgatgagtctaggttctcttgatgat
gatgacccaaacattctcctggccattcagctgtccctccaggactctgcgatggcagag
atcgggtccaaccatgacgcgcttgccaacgaagcctcgctcggcgctatcggcacatcg
ctgccttctaggctcgagcggagtgctccgggtgcagaagtcctttccagagcttctcta
agcagctcagaactgctggatttgggagctaacttggctcgacttggcaacatcggcacc
agcagccagtgctccgcagcatctggtgcgtccgcctctgtgcagcactgcgacagtcac
cgcagggccttcggggcttcgctgccgataccggtgggtccaggaggcggcgactcatcg
acgggcctcttctcgtcctccagcgacacgttagactcgaccacatgcggcagccacgac
ccgtccacgtcctccgcagcaaacgctaatttgctgggcaacatcatggcatggttccac
gacatgaatccccaaggcatcaccctggtcccctcgacctcctccgacaccgacggtgag
gggggcgagaaaggcgggggggtcctgcccgacagcacctcgggacagagacctcgggaa
gtgacggcagaagtgggtttcttctctcagcgaccgggcgacacggaggggaaggagtgt
gccgttgctcagaggccgacgcagttggatctggtggggctggatgccgtggcgctgccc
tacgcgcccaccctcgacacaggcggggaccacggccagcggggggggggctcaaaggtc
tgccgcgtcgacactccgcagtgtgactcggtctccgaccatctgcccagcagcagctcc
tctgagtgggaggaccaagtgcacttggtatga
DBGET
integrated database retrieval system
