Pungitius pungitius (ninespine stickleback): 119197134
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Entry
119197134 CDS
T07626
Symbol
l3mbtl1b
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119197134 (l3mbtl1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119197134 (l3mbtl1b)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119197134 (l3mbtl1b)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
119197134 (l3mbtl1b)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
119197134 (l3mbtl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
MSL3_chromo-like
Motif
Other DBs
NCBI-GeneID:
119197134
NCBI-ProteinID:
XP_037309071
LinkDB
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Position
11:12792629..12806985
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AA seq
850 aa
AA seq
DB search
MVGDIIGVGMTDTPPRDGPSQGAEFDMMGALDWKDGIATLPGSDIRFRMTEFGTLEIVTD
LEVKGQKTKPETLDPAQSHTPTPPPEGQSQTSKATAPAPVNQSQPGLSLNKVPGPVLLSL
EEGPNAEGPSVEVGPSVEVGSNADAGQNGELSRCRACDGRIPPDALFQGKFCCSVCAQPS
SGRSSPGEARESQAADGERLGKRVRKKRKMYMDSGDEEEDNQEEPEEKAKTTKGRRGAKI
AKLVTGPAHKKRAWSWPSYLEEERAIAAPAKLFKEHQSLPQSRNSFKVGMKLEGLDPSHP
SLFCVLTVAEIQGYRVRLHFDGYPECYDFWANADSWDMKPAGWCEKNGHKLLLPKGCKDG
EFNWSMYVKNCRGQLAPKHLFKSLNTSVTPSGFRAGMKLEAIDRKNPSLVCVATIAAVVD
NRLLIHFDNWDDTYDYWCDASSPYIHPVGYCEDAELTLTTPAGKTQTKTQVEYKQPKSFS
WEKYLEETGTQAAPARAFKPRPPHGFQIGMKVEAVDKRNPMLIRVATIADTEDHRLKIHF
DGWSSEYDYWVETDYPDLHPVGWCQKTGHPLQYPNGSSDLVTAPGQGCPTPGCNGVGHIR
GPRYGTHYTQVSCPYSETNLNKEGLLPDRLSGERPLALSGPHPRGRRPDPSTNTTTQTSS
APDQAEGAEDSHNRKPLTVEAERLARNTQPEPPGGASEQSQNGTRPKRTAPVPKYLKMHY
VKEEIDDGKASPDAISLQQALHESVFSPGLSASPPHRVSLCWDKHCQLLPEVLGLTAKRV
ATWSAEEVATFVKGLPGCKEHAATFKTEQIDGEAFLLLTQGDIVKILSIKLGPALKIYNS
ILMLKNADEE
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggttggggatatcataggagttggaatgaccgacactcctccaagggatggcccctct
cagggtgctgagtttgatatgatgggggctctggactggaaggacggtattgccacgctg
ccgggcagtgacattcggtttcgcatgacagagttcgggactttggaaatcgtcacagac
ctagaggtcaaaggacagaagacaaagcctgagacgttggacccggcacagtctcacact
cctacacctccaccagaaggacaatcacagactagcaaagccacagctccagctccagtc
aatcagagtcagccaggattatctctaaataaagttcctggtcctgtgcttctgtcttta
gaagagggacctaatgcggagggccccagtgtggaggtcggtcccagtgtagaggtaggc
tctaacgcagacgcgggtcaaaatggggagctgtcaaggtgccgggcctgtgatggccgc
atccccccagatgccctcttccagggcaaattctgttgctccgtttgtgctcagccctcc
agcggcagatcgtccccaggggaagcaagggagagtcaagcagctgatggtgaaaggctg
ggtaaacgtgtgcgcaaaaagaggaagatgtatatggattccggggatgaagaggaagac
aaccaagaggaaccagaggaaaaggccaagactaccaaagggaggagaggtgccaaaatt
gccaaactggtgaccggcccagcccataagaaacgggcatggagctggccttcttacttg
gaggaagagagggccatcgctgctcctgctaaactattcaaagagcaccagtcacttcct
caaagcaggaacagttttaaagtgggaatgaagctggaggggctggacccatcgcacccc
tccctgttctgtgttctcactgttgcagagatacaaggctatagggtgaggctccacttt
gatggttacccagaatgctacgacttctgggccaacgccgactcttgggatatgaaacca
gccggctggtgcgagaagaatgggcacaagttattgttacctaaaggttgtaaggatgga
gagtttaattggagcatgtacgtgaagaactgtaggggacagctggccccaaaacacctt
ttcaagagtctcaacacatctgtgactccgtctgggtttcgagcagggatgaagctggag
gcaattgacagaaaaaacccgtctttggtctgtgtcgcaaccattgctgctgttgttgac
aaccggctgctcattcattttgacaactgggatgatacatatgattattggtgtgacgct
agcagcccgtacatccatcctgtgggttactgcgaagatgctgagcttactctgactact
ccagctggtaagacacagaccaagacacaagtggaatataagcaacccaagagcttctca
tgggagaaatacctggaagagacaggcacacaggcagctcctgctcgtgctttcaaacca
cgacctccacatggcttccagattgggatgaaagtggaagctgtggataagagaaacccc
atgctcatccgtgttgcaacaatagccgacaccgaggaccaccgactaaagattcatttt
gatggctggagctcagaatatgactattgggtggagacagactacccggatttgcaccct
gtagggtggtgtcagaaaacgggacacccgctacaataccctaacggctccagtgattta
gtgactgccccaggtcaaggttgtcctaccccaggatgcaacggggtgggccacatcaga
ggaccccgctacgggacccactatactcaggtgagctgtccctattcggagaccaatctg
aacaaggagggcttgctgccagaccgcctaagtggagaacggcccctcgccctcagtgga
cctcatccacgcgggcgccgccccgatcctagtactaacaccacgacacagacctcctca
gcgccagaccaggcggaaggagctgaagactcccacaacaggaaaccgttgacagtggag
gctgagcgcttggcacgtaacactcagcctgagccaccgggcggagccagtgagcagagt
cagaatggaacaaggcctaaacggactgctccagttcccaaatacctgaaaatgcactac
gtcaaagaggagattgacgatggtaaagcctctccagacgccatctctctccagcaggcc
ctccacgagtctgtgttttcccctggcctctccgcctcccccccccaccgcgtgtctctc
tgctgggacaaacattgccagctgctgcctgaggtcctggggctgactgccaagcgagtg
gccacttggagcgcagaggaggtggccactttcgtcaaaggccttccaggatgtaaagaa
cacgccgctacatttaaaacagagcaaatagacggcgaggccttcctgctgctcacgcaa
ggggacattgtcaagatcctgtccatcaagttaggacccgccctgaagatctacaactcc
atcctcatgttgaagaatgcagacgaagagtaa
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