Pungitius pungitius (ninespine stickleback): 119197195
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Entry
119197195 CDS
T07626
Symbol
cicb
Name
(RefSeq) protein capicua homolog
KO
K20225
capicua transcriptional repressor
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119197195 (cicb)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119197195 (cicb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
119197195
NCBI-ProteinID:
XP_037309187
LinkDB
All DBs
Position
11:complement(13140246..13171210)
Genome browser
AA seq
2719 aa
AA seq
DB search
MRPLKKHRGRSPPLTRGRGGRRRGSSQPLQEKDPKRAKRETLVKTTQHSPSAPTGKQISH
SIEEPITNSSSPKRAEPTELRKPVESLEEKAAEKTETEKIDGTNGNKAVSTNSKAFPTST
PTPLSTATPPPATNHSLGSVSSRKTATFKARVPKKKYTYEHFANNASSLTTIPTSSPALI
HSSYCNAHSKISDNLSIPNNNFKSSNSISQSSNKSIHSSINSSAKNTTSGIDIVTNHSSH
NTLIDSSNSRSNNCSGNQPSVLTVESKAPEGNRVVSVDDKTLRTAGSQDKDSQPGKYKSE
GARYSVRSSSTDTASDHSADLDGLEATGPCLPQKNPRCSAALHHSQHKEAGLSEGLAEAL
AKGMRNQRVLARRLKTTTESGVGSTGNRGLEERDSRPLSPVFRPGVVRRVSGGTVEVQLQ
GEETLVGYPFRGGTAMASPSGAESPAEFILDAPPPGMAPVAVRTRVCVPFGGEEGGPPLY
REGIVTQVDPHPGVSFPYQVLLSEDRESLHGTHVGEEKEKRKANADSQAVWVSRQSLRLL
TPPWEVPHLDGGRAQEREREREREERERREEMEVEREVCQLSIGMGVLGGGARVGHGFEG
VAGGHPYGNTHPPPRSSTVTSGAASGSGAGSEPNTPEEDVEVSRLNMALAVGAKANAGNS
QHRNVASKSLCYPTSSPHLPALQVLAPPHLSTLASPHPPRSPALIGSEINRTTPSLPPLK
STPTQTPTPTSGVGSSSTSSRSRTPLSLAQQKYKKGDVVCTPNGIRKKFNGKQWRRLCSR
EGCMKESQRRGYCSRHLSMRTKEMETAAGGGGGGSSSGTVTPDLRGRASSEFEWDDTSRE
SSETSSRGDSRPRLVLPSLLPHDLSSRFDFDECEAATMLVSLGSSHSGTPSFSPISTQSP
FSPAPSPSPSPLFGFRPANFSPITASPVLQPRRHRQPSGTGGGAAGGSKATAPAAGGERE
RHSSGMQPSFHSNLMFTVPMSPSKRKPDALAPPTLPSHHHDYTPKTEPEQGDLNGSFRVL
SPHVQASLSRTHTPTFSRPRGVGTLSSSRPPSSTAVSPPPLLVSPTPPSPLTPDGGPRRV
VPVSQQALRDSPVIVRNPEVPLAKFTACPSEKGGGGGGDLGGVDNTLFKDTGLEPLAPQP
IAGLQVPVPINAAVANGTVLLRGPGQTLVLVSPTSSSVPTAATPAPSLQPLSVVVGTTVA
AAAPSGADGPVEREENGGTGFGGEVQQPVPCHPSPTALLPLILPAESLHPVPRKDIIMGR
PGTVWTNVEPRSVPVFPWHSLVPFLAPTQSDASSQPGEGQHPVNHPQAASLKTECQGVAS
LSQQPAEAPPTVERGPPSRPSPSSDEQPPEEEKGDAERERPESETESDVDDLFLPGVVPE
QPLSTSPVKRRTQSLSALPKDGDKSCPGKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQ
DNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSDGRGVP
GGKDIRERSMSESTEPHSVELKSAGPSLVGVSERNTGEGLVGQLSRPRAFSQSAVHSLER
SDRGNTQVLAELTQMCGDGGSKFSGHVPNPQSQRGVSEDMTSDEERMVICEEEGDDDVIE
DPYPSTSIDLKCKERVTDSDSENGSGDESNRKRVFAPVICSSASSSSSHYTSHGRSVSLS
SYPSSKRYDDGRSGGGGGFSDHRRKDRGEGDTRDTFGGGGGGGVQATSLSLTSGQSVIST
SSAGGYLSSSAGAPGGNPLLGIGAVRVASTVVTNVMRPVISTPLPIASKSRDGGTSSPHP
PERKPLTFHQQPQFLIGSGPGGGVPGTGGGYYSSSSPNPLGAGIGPGGVVTNLVLGGALP
AQPAVQLITPSHHHHPSQQQAFSSSAVSVSHSQTNGPLPLSLLQPQFLPTSSLASPGGKA
ITQVQYILPTLPANTNPNPNSPPQQLSQPTGIFNLPTAPPTHMSLANGRQQGIGSLTGYS
SSSAVGVVSPGTRVQTQSPVLQGKMIVPMATVRTAPAPAQQVPIMAPALPVQNGAQAGGK
IIQIAPMPVVQSQLSHGGTVHPVSPFPGTVGTTAVVSPGSAPSQAVLLPPAPTRITYVQS
TPGIPSTLPLVSTTAVSSIGQHGSAYVQSPLATLGFTAIGPPGQTLVQPLIAGQPPLLAT
APSPQPSISAPAPGPGGQTVTAIYPPSPNVTMATGVVSMTALPPSVVYSISGPSTVSSHI
LSKHTATPSTIAHPHPQPQPDRQADRHPPPDRPPDRQTDRPAERQTELMTHSDRHLERQT
SASVSSVAPSGGSGVSTRPCSPPPIQTPGSTPGTPKLTQLPVRTPQKVKATLANIPVGSY
EGGGRVKEREREKEREREKEKERVAAATSRFSFDAEPAGQTGSPSTHPAQDPPPSSSSDR
TLEGSCAADSFDAQHSESTTTKEAGWKESLPSSSPSPPSATEPPLPPPQADKDGPPAKKV
KARPPPLKKTFESVDKVLSEVYFEERFAELPEFRPEEVLPSPTLQSLATSPRAILGSYRR
KRKNSTDLDSATDEQVSPKRKSRRRSSCSSEPNTPKSAAKCEGDIFTFDRAATDGEDILT
DLEFDKVPYSSLRRTLDQRRALVMQLFQEQGFFPSAQATAAFQARYSDIFPTKVCLQLKI
REVRQKIMQTAAPSDVSAFGIPDSLGSLPGPSGSQSGEGALRGGGDLQDDDVEQGAEGSP
EDPRDSQESSRRGMLTNLN
NT seq
8160 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgctaaagaagcacagaggccgttctcccccgttgaccagaggtcgagggggg
agacggagaggaagctctcagccccttcaagagaaagaccccaaaagagccaagagggaa
acactcgtcaaaaccacacagcattcccccagtgctcccacaggcaaacagatctcgcac
tccatcgaagagccgatcacaaacagcagttctcccaagagagcggagcctacagagctg
aggaaacctgtggaatcgctcgaggaaaaagcagcagaaaagacagaaacggaaaagatt
gacggcacaaacggaaacaaggccgtgtccactaactctaaagcatttcctacctccacc
ccaacgccactctccacggccacgccccctccggccaccaatcacagcctaggctcagtc
tctagtaggaaaacagccacatttaaggctcgtgtgcccaagaagaaatacacatatgag
cactttgcaaacaatgcgagtagcctgactaccattcctacctccagccctgcacttata
cacagcagttactgcaatgctcacagcaaaatcagcgataatctgagtatacccaataac
aacttcaagagtagtaacagtattagtcaaagcagtaataaaagcattcattctagtatc
aatagtagtgctaaaaacactacaagtggtattgacattgtgactaaccatagtagccat
aatactcttatagatagcagtaatagtagaagtaataattgctcaggtaatcagccatca
gtgctaactgtggaaagcaaagcgccagaagggaaccgcgtcgtttccgtggatgataaa
accctcaggacggcaggatcccaggacaaagattcccaacccgggaagtataagtcggag
ggggcccgctactcggtgcgctcctcctccacggacactgcgagcgatcactccgctgac
ctggacgggctggaagcaacaggaccgtgcctgccccaaaagaacccccgctgctcagcc
gctctccaccactcgcagcacaaagaggccgggctttcagagggactggctgaagctctg
gccaagggcatgaggaaccagagagtccttgctcgccggttaaagacgaccacggagagc
ggggtcgggtccacgggcaaccgggggctggaggagcgcgactcacggcctctgtccccg
gtgttcaggccaggggtggtgcgcagggtgagtggagggactgtagaagtgcagctccaa
ggagaggagaccctcgttgggtacccgttccgtggcgggaccgcgatggcatccccctct
ggagccgagagcccggcggagttcattttggacgcccccccgcccggcatggcgcccgta
gcagtgaggacccgggtgtgcgtgcccttcggtggagaggaggggggtcctccgttgtac
agagaaggcattgtcacccaggtggacccccaccctggcgtgtcctttccttaccaggtg
ctcttgagtgaagacagggagtctctgcacggcacccatgtgggggaggagaaagagaaa
aggaaagctaacgcagattctcaggctgtgtgggtgtcccgtcaaagtctgaggctgctc
acccctccctgggaggtcccacacctggatggtgggagggctcaggaaagagagcgcgag
agggagagggaggagagggagcgcagggaggagatggaggtggagagggaagtgtgccag
ctgagcattgggatgggggtgctgggagggggagcaagggtgggccatgggtttgaagga
gtggccggggggcatccttacggaaacacacatccgcccccccgttcctccactgtgacc
tctggtgcggcctccggctcgggcgcggggagcgagccgaacactccggaggaggatgtc
gaggtctctcgtttgaatatggccctcgccgtcggcgccaaggcgaacgccgggaactcc
cagcacagaaacgttgcttccaagtccctctgctaccccacctcctcaccccacctgcct
gcgttgcaggtcctggcgcccccgcatctctccaccctagcgagcccccatccgccccgc
tcccctgccttaatcgggtctgagattaacagaaccactccgagcctacctcctttaaag
tccactcccactcagacccctactcccacttccggtgtggggtcctcctctacctcctct
cgttccaggacccccctctcgttggctcagcagaaatacaagaagggcgacgtggtgtgc
acgcccaatggcatccgtaagaagttcaacggtaagcagtggaggaggctgtgctccagg
gagggctgcatgaaggagtcccagcgtcgaggatactgctcaagacacttgtccatgagg
accaaagagatggagacggcggcaggaggcggaggaggaggcagcagctcgggaaccgtc
acccccgacctgcgggggagggcgagcagtgagtttgagtgggacgacacgtcgagggag
agcagcgagactagtagcagaggagactccagaccccgcctggtcctcccttccctcctc
ccccacgacctgtcgtcgcgctttgactttgatgagtgcgaggccgccaccatgcttgtg
tcgctggggagctcgcactccggcaccccgtccttctctcccatctccacccagtcgccc
ttctcccccgccccgtctccctcgccttccccgctgttcggcttcaggcccgccaatttc
tccccgatcaccgcctccccggtcctgcaaccccgaaggcacaggcagcccagcgggact
gggggaggggcggccgggggcagcaaggcaacggccccggccgcaggaggggaaagggag
agacactcgtcgggcatgcagccctccttccacagcaacctgatgttcacggtgcccatg
agccccagcaaacgaaagcccgacgctcttgctccgccgaccctcccctcgcaccaccac
gactacacgcccaagacagagcccgagcagggcgacctgaacggctcttttagggtgctg
tccccccacgtgcaagcctcactctcccgcacgcacacgcccaccttctcccgaccgaga
ggagtcggcaccctctcgtccagtaggccgccgtcctccaccgccgtctcccctcctcct
ctgctggtctcgccgactcccccgtcccctctcactcccgatggagggcctcgccgcgtg
gtacccgtgtcccagcaggccttgcgggactcccctgtcattgtgaggaatccggaagtc
ccgctggcaaaattcacggcgtgtccctcagaaaaaggaggaggaggtggtggagacctg
gggggggtggataataccttgtttaaagacaccggcttagaacccctcgccccgcagcca
atcgctggcctccaggttcccgtccccattaacgccgcagtagccaatggcaccgtcctc
ttgcggggcccgggccaaacgttagtgcttgtgtccccgacttcgtcctctgtccccacc
gctgccacccctgccccctccctgcagcccctctcagttgtcgtcggcacgacggtcgca
gctgccgctccgagtggcgcggacggacccgtggagcgggaggagaatggggggacgggg
ttcgggggtgaggtccagcagccggttccgtgtcacccgtctcccacagctctgctgccg
ctgatcctcccagccgaaagccttcaccccgtcccacggaaggacatcatcatgggacgt
cctggcacagtatggaccaacgtagagccccggtctgttccagtcttcccctggcattcg
ttggtccctttcctggcacccactcaatcggatgcttcttctcagccaggagagggtcag
cacccagtcaaccacccccaggcagccagtctgaagacagagtgtcagggggtggcttcg
ttgtcacagcagcctgcagaggcaccgcctactgtggagagaggtcctccatcccggcct
tctccctcttccgatgagcagcctccagaggaggagaagggcgacgcagagagggagagg
cctgaaagcgagacggagagtgatgttgatgacctcttcctcccaggagttgtaccggag
cagcccctctctacatcaccagtgaagagacgcacccagtccctcagcgcgttgcccaaa
gacggagataagagctgccctggaaagagggagaaggaccacatccgacgaccaatgaat
gcattcatgattttcagtaagcgccatcgagcattggtgcaccaacggcacccaaaccag
gacaacaggacagtcagcaagattctcggggagtggtggtatgctcttggaccaaaggaa
aaacagaagtaccatgatttggcgttccaggtaaaagaggctcactttaaagctcaccca
gactggaagtggtgtaacaaagacaggaagaagtccagctcagatggccgtggggtacca
gggggcaaagacatcagagagaggagcatgtccgagtccacagagccccactctgtggag
ctaaagagtgctggtcctagtctggtcggcgtgtctgagaggaacacaggagaaggtctt
gtaggccagcttagccgtcccagagccttctctcaaagtgccgtgcacagcctggagcgc
agtgacaggggaaacacacaggtcctggcagaactgacccagatgtgtggggatgggggc
agtaagttttcgggtcatgttcccaacccccaatcccagaggggggtaagcgaggacatg
accagtgacgaggagcgcatggtcatctgtgaagaggagggagatgatgatgtcatcgag
gacccttatccgagcacttccatagacctcaagtgtaaagagcgggtgacggacagcgat
agtgagaacggttctggagacgaaagcaaccggaagcgggtttttgcgccagtcatttgc
tcctccgcatcatcatcttcctcacactacacctctcatggcaggagtgtctctctgtcc
tcttacccaagcagcaagcgttacgatgatgggagatcaggaggaggaggaggattttca
gatcacaggagaaaggacaggggagagggagacactagagatacatttggaggaggagga
ggaggaggagtgcaagccacatctctctccctcacttctggccagtcagtcatctccact
tcctctgctggagggtatctgtcctcatcagcaggtgccccggggggaaaccccctcctg
gggattggtgctgtaagggtggcctcgacagtggtgaccaatgtaatgcgtcctgttatt
agcacgcccctcccaatcgccagcaaatccagagatggagggacatcgagcccgcatcca
ccagagaggaagcccctgactttccatcagcagccacaatttctgatcggttcaggacca
ggaggaggagttccggggacagggggtgggtactactcttcgtcatcacctaatccgtta
ggtgcaggcattgggcctggtggtgtagtgactaatttggtgttgggaggggctctgcct
gctcaaccggccgtacagctcatcacaccctcccaccaccatcatccctctcagcagcag
gccttttcctcctctgctgtgtcagtgtcgcatagtcaaaccaacgggcccctgcctctg
tccctgcttcagccccagttcctccccacctcttccttagcgtcccctgggggtaaggct
atcacacaagttcagtacatccttcccaccctacctgccaacaccaaccccaaccccaat
agtccacctcagcagctcagccagccaactggtatcttcaacctgcccacagctccaccc
acacacatgtccttggccaatgggaggcaacagggaataggttcactgacaggatattcg
tccagctcagcagtgggagtggttagccctggaacaagagtgcaaacacagtccccggtg
ctccagggcaaaatgattgttcccatggcaacagtacggacagcaccagcccctgcccag
caggttcccattatggctccagctcttccggtccagaacggtgctcaggctggaggcaag
atcattcaaatagctcccatgcctgtggtccagtcccagctgtctcatggtggaacggtc
catcctgtcagccccttccccggaacagtgggcacaactgctgtggtgtccccaggatcg
gccccctcccaggctgtactcctgccaccagctcctaccaggatcacttatgtccagtcc
acaccagggatcccgtcaactctgcctctggtctccacaacagcagtctcttccatcggt
cagcatggttctgcatatgtgcaatcgcccctggcaactctcggattcactgccattgga
ccacctggtcagaccctggtgcagccactgatcgcgggtcagccaccactcttagccaca
gctccgtctccacagccctccatctcagcccctgccccgggacccgggggccagacggtc
accgcaatctaccctccctcacctaacgtcaccatggcaacaggggtggtctccatgact
gcgttaccccccagcgtggtctactccatctccggcccttccactgtttcctcccacatc
ctgtccaaacacactgcgacccctagcacaatcgcacacccacatccgcagccccagccg
gacagacaggccgacaggcacccgcctccggaccgacccccagatcgacagaccgaccgg
ccggccgagaggcagacagaactcatgacgcattcggacagacatctggagaggcagacc
tccgccagtgtcagctcagtggccccttcagggggctcaggtgtgtccacgaggccctgc
agtcctcctccgattcagacacctggcagtacaccaggtacacctaaactcacccagctg
cccgtcaggacccctcaaaaggtgaaggcaacactggcgaacattcctgtaggcagctat
gaaggaggaggccgagtaaaggagagagaaagggagaaggagagagagcgagagaaggag
aaggagagagtggccgcagccaccagtcgcttctcttttgatgctgagccagcagggcag
acggggtctccatcaacacatcctgcccaggacccgcccccctcatcctcctctgaccga
accctggaggggagctgtgctgcggactcctttgatgcccaacatagtgaaagcacaacc
accaaagaggctggatggaaggagtccctcccctcctcatctccctcccctccatcagcc
acagaaccgcccctgccgcccccgcaggctgacaaagacggcccccccgccaaaaaagtg
aaagcacggccgcctccactgaagaagacttttgaatccgtcgacaaggtgctgtccgag
gtatatttcgaggagcgcttcgccgagctgcccgagtttcggcctgaggaggttttgcct
tcccccaccctgcagagtctggccacttcaccccgcgccatcctgggcagttatcgccgc
aagaggaagaactctacagatttggattcagccactgacgagcaagtctctcctaagaga
aagagccgtcggcgctcgagctgcagctcggagcccaacacgcctaaaagtgccgccaag
tgtgagggagacatcttcacctttgacagagcagccacggatggagaagacatcctgacg
gatctggagtttgataaggttccctactcatccctgagaagaacgctggaccagaggcga
gcgctggtcatgcagctgttccaggagcaaggcttcttcccttcagctcaggccactgcg
gccttccaggcgagatactccgatatattccccaccaaggtgtgcctgcagctcaagatc
agagaggtgcggcagaaaatcatgcagacggccgccccctccgacgtctctgccttcggc
atcccggactctctcggctccctccctggaccttctggctcccagtcgggagagggagct
ctgaggggaggtggggacctgcaggacgatgacgtagagcagggcgcagaggggagcccc
gaggatcctcgtgactcacaggagtcttctagacgagggatgctgaccaatttaaattga
DBGET
integrated database retrieval system
