KEGG   Pungitius pungitius (ninespine stickleback): 119197196
Entry
119197196         CDS       T07626                                 
Symbol
mdc1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppug03400]
    119197196 (mdc1)
DNA repair and recombination proteins [BR:ppug03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    119197196 (mdc1)
SSDB
Motif
Pfam: BRCT_2 RTT107_BRCT_5 FHA BRCT
Other DBs
NCBI-GeneID: 119197196
NCBI-ProteinID: XP_037309188
LinkDB
Position
11:complement(13475188..13486056)
AA seq 2084 aa
MDATQIISDSILESDEEENKDEIENKRGRPLAKLCILKNEHIPETELPLFLGDNVLGRDP
NTCTLPLPAPSISKQHATICISVYRRKGRHSEVETEALIWDHGSMNGTRKGHMKLTPNVR
YALSEGDGLAVADIPCQYVSCAIGRVSSKGDTMASVSKHSGVNDISLDGSGEKGGDTSTG
GKTCVNGDTKASVLLSDQEDRGKTSVRTSYLSFEQTPTQPHGTLVPESDSDSDDKKGDGR
RKALVSNSDFHESGPACSTFLSPTNKIVPESEDESPITPPSSAKNRPHGHVSFSKEDHGV
QQQLKNENTLGVVHNNEEEEEEERAALVRSKSEESEHCESGKHESNVSLTGENEFPKSSA
TFLTDPIPVFDMDSDTDVEGEEERGATAGPVTLNANQQADHPPNTAHFYIDSDTDVDEPV
HKSAPSSADHTKPLHVISVIQPEGITFDSDTDVDEDAVSEAAIVTASLRSTNAVVSSPSK
QRNNLHLDSDTDIEEEEEEENQWRKTSLCSKIDETPPLLDIKSTGPKSARDSETEDGAIP
APAISELSVVSAGTESVTTADLGGVLGFLSDSDTDVEDDSSLLMPVVASNWSINPSIMSG
ALQSDSDADRDVDESSMSPAGDGVDPADLRVDSDTDVEDEENQVPSLRRENTPGLLVPLQ
QNCSTPVQMSGGELENMETQAFLIPASSPFGHLRPMSLSPGSANPEDDLCVVAETQSFLL
PTRDCQGNPSKIHSEDPIQSSVSETCKQSTRGESFQLGLSESSYLEGHAQALATESTQAF
VSVVQGVNLEDTQAYADTTSLENDSNLQAHGDDQEPATCSKMSAKEGRVDFSLEATQAYI
SEPNSDSEVETDEDERIIAAAAETQPFFTSSTMALAETQPMFNMEEESLDHKNPIPSVLQ
VKSSSQHVTKEKEEPVEAAQPVTETQPMHVSEDEEIDGEELFLQKANQLRLEDQSQTLTK
SESSLAETQPIGQAETLPMATSGKEESDVSPDSIPGPRKRKVKQMWLEDVQIQTLANTEL
STVETQPVDTCTDSESDEEDSTPGPQKRRAKLLQLGDETEPLTSSAVVETELLATCMSEK
RKDEDTTPGPRKRKAKTLPLEEEETQPLTVSEVSAVESQPIVAGEERESDDEDSIPGPRK
RTAKPIQKEDSTEGSKAVTPPQRGKGRQTEAGSSGTTTGGGRKTTTRARLREEEEQAECS
EPPKRRRTRAMKALPNPTSTVSGGKARLDEEESVKEEEVEQAKQARGKTFTVDPKDSKQD
EETLETGRKNIENYILKKPKGREEQYKTLEMERKDEEEHHRRQAEDAEKLRLEQEGAEKE
RIERERKEEDEEEIADRAQKEREEHLKQKRNNEEENERHEKAAREEERIEKERAKEEKER
LECEKAKREENERTEKIRKEDQEKLQCEKAEREKKEMAEMDREEEEEKEKLMTAKREQEE
RLERERNEQEKEAKEKQTKEQQGNQKEENSPKTTATGRRTARRTRGAPRTTGPHQDSTTS
ANDDVPARRTRSRSNSSNSVSSERSVSSVSTQGSSGRGRGAKRQAAIATSSNRRTVAAEP
TQRDIHDLSPRGVRSRSNSEISSCSLSSHSRGRGGRQRGRGRKTESDSIPPAGSQSGQNL
ALEPTTRGRRGRNEVPPEEEKEEADSQPASTIRGRQRANANSPKPAAGDQKSPSSQRCAR
KDSPLPKSNVLGRGQKAVKSETVEVPPASAVSDGEEAKEKTKGTKRDSKANAEEDSSRSS
KISEVKERAQTIEEAQDKSQVQVVRKGRASSAQAKKKANVSSAELVVKEESEEMEEGTVR
RRVRGRPSMVQKLKKEKQEEMDQDPPVEASEPQTPTSSVSRKRPALTDSSPAAKTTRSSS
ASPAAGGQWRAARQAYKVLFTGVVDEEGERVLARLGGSLAEGVADMNCLVTDKVRRTVKF
LCALAKGVPIVTTHWLERSGRAGSFLPPNAFVVKDPEQEKKFSFSLQDSLEIASNQRLLQ
GYRIHVTKSVKPEPVHMKDIISCSGATFLPKMPSSYKPQTVVISCEEDLRLCGTALSESV
PVVTAEFILTGILRQKVDLETHKLSAPANTPQPAGGRGRSRKKT
NT seq 6255 nt   +upstreamnt  +downstreamnt
atggatgccacgcaaataatcagcgactcaatcttggagtcagacgaggaagaaaataaa
gacgagatcgaaaacaagagggggcgacctttggctaagctgtgcatcttaaaaaatgaa
cacatccctgagacagagttgcccctctttttgggagataatgtgttgggccgtgacccc
aacacctgcaccttgcccctaccagcaccctcgatctccaagcagcacgccaccatctgc
atctccgtctacaggagaaaagggcgtcacagtgaagtggagacggaggctttgatttgg
gaccacgggagcatgaatgggacccgcaagggccacatgaagctgactcctaatgtacgc
tatgccctcagtgaaggtgacggtttggcggtggcagacatcccatgtcagtatgtcagc
tgcgctattggccgcgtctcttcgaaaggagacacgatggcctctgtgagcaaacattcg
ggagtgaatgacatttcgctggatggctcgggagaaaagggaggtgacacaagcacaggc
ggcaagacgtgtgtcaatggggatacaaaggctagtgtgttgttatctgatcaggaggac
agagggaagacttctgtcaggaccagttacctgtcctttgagcaaactccaacccagcca
catgggaccctggtcccagaatcggattcggactcggacgataaaaaaggagacggaagg
cgcaaggctctagtgtccaattctgacttccatgaatcaggtccagcctgttcaaccttc
ctgagtcccacaaacaaaattgtccctgaaagtgaggatgaaagtcccatcacaccgccg
tcctcggctaaaaacaggcctcacggacatgtcagcttcagtaaggaagaccacggcgtc
caacagcagctaaagaatgaaaacacacttggagtcgtgcacaacaatgaagaagaagag
gaggaagaaagagcagcactggtgaggagtaagtctgaggaaagtgaacactgtgagtca
gggaaacatgaaagcaatgtcagtcttactggagagaatgagtttcccaaatcttcagcg
acattcttgacagatccgatccctgtgtttgacatggacagtgacactgatgtggaggga
gaggaggaaagaggggcaactgctggcccggtgaccttgaatgcaaaccaacaagctgat
catccaccaaacacagcacatttttatatagacagtgataccgatgtcgatgagccagtt
cacaaatcagcaccttcctctgcggaccacacaaaaccacttcatgtgatttccgttatt
cagccagaaggcatcaccttcgacagtgacactgatgtggatgaggatgctgtgtcagag
gctgctattgttacagcgtcacttcgaagcaccaacgcagttgtgtcttccccttctaag
cagcgcaacaatttacacctagacagtgacacagatattgaggaggaggaggaagaagaa
aatcaatggcggaaaactagtttgtgctctaaaatagatgaaactccccctttattagat
atcaagtcaactgggccaaaatcagcgcgagacagcgagacggaggatggcgctattcct
gccccggccatcagtgaactctcggtggtgtctgctggcaccgagtccgtcaccactgca
gatttaggaggtgttttaggttttctgtctgacagcgacacagatgtagaagacgattct
tctctgctcatgcccgttgtggcctcaaactggtccatcaatccgagtataatgtcagga
gctcttcagtcagattctgatgcagacagggatgttgatgaatccagcatgtcccctgct
ggggatggggtcgatccagctgacctcagagtggacagtgacacagatgtggaagatgag
gagaaccaggttccaagcctgcgcagagaaaatactcctgggctgttggttcccctccag
cagaactgctctactcctgtgcagatgtcgggaggagagctggaaaatatggagacccag
gcgttcctgattcctgcatcaagtccatttgggcatttgagacctatgtcattgtctccc
ggctcagccaacccggaggatgacttgtgtgttgtggctgagacccagtcgttccttctt
cctaccagagactgtcagggaaacccttcaaagatccacagcgaggaccccattcagtcc
tctgttagtgaaacatgcaaacagtccactagaggagagtccttccagctgggattgtct
gaaagcagctacctggagggtcacgcccaagctctagccacagagagcacccaagccttt
gtgtctgtggtacagggtgtgaatctggaagatacccaagcatatgcagacacaacctcc
ttagagaacgattctaatctgcaggcacatggggatgatcaggaaccagccacatgttca
aaaatgtctgcaaaagagggtcgtgtagatttttccctggaagcaacacaggcttatatt
tcagagcccaacagtgattcagaggttgaaaccgatgaagatgagagaataatcgctgct
gctgctgagactcaacctttttttacctcatctactatggctttggctgaaacccaacca
atgtttaacatggaggaggagagtttggatcacaaaaatcctattccctctgtactacaa
gttaagtccagctcacagcatgtaaccaaagagaaagaagaaccggtggaggcagctcaa
cctgtgactgaaacccagcccatgcatgtcagtgaggacgaggaaattgatggtgaggaa
ttgtttctacaaaaagcaaatcaactgcggcttgaagaccagtcacaaacactcacaaaa
tctgagtcatcacttgctgaaacgcagccaattggtcaagctgaaactctgcccatggct
acaagtggaaaagaggaaagtgatgtttcaccggattcgattccaggtccacgaaaaaga
aaagtaaagcaaatgtggcttgaagatgtgcagatacaaacactggcaaacacagagctc
tctactgttgaaactcagccagtggatacatgtacagattcagaaagtgatgaagaggac
tcgactccaggtccacaaaaaaggagagcaaaactattgcaactcggagacgagacagag
cccctcacaagttctgcagttgttgaaactgagctattggctacatgcatgagtgaaaag
agaaaggatgaagacacaaccccaggtcctagaaaaagaaaagcaaagacactgccactt
gaagaagaggagacacagcccctcacagtgtctgaagtctctgctgttgagtctcagcct
atagtcgcgggggaagaaagagaaagtgatgatgaggactcaattccaggtccacggaaa
agaacagcaaagccaattcaaaaagaggactctactgaaggatctaaagctgtcaccccg
ccgcagaggggaaaaggtagacaaactgaagctggaagtagtggcacaactactggagga
ggaagaaaaacaacaacaagggcacgactaagagaagaagaggagcaggcagagtgttct
gagcctccaaagagacggagaaccagggcgatgaaggctttgccaaatcctacttctaca
gtaagtggaggaaaagcaaggcttgatgaggaggagagtgtaaaagaggaggaggtagag
caagctaaacaggccagagggaaaacatttacggtggatccaaaagatagcaagcaagat
gaggaaacgcttgaaacggggagaaaaaacattgaaaattatatcttgaagaaaccaaaa
gggagggaagaacaatataaaacattagaaatggaaagaaaagatgaagaagagcatcac
agacggcaggctgaagatgcagaaaagttaagacttgaacaagagggagcagaaaaagag
cgaatagagagagaaagaaaggaagaagatgaagaagaaatagccgatagggcacaaaag
gaaagagaagaacatttgaagcagaaaagaaacaacgaggaagaaaatgagagacatgaa
aaagcagcaagagaagaggagagaatagaaaaggaaagagcaaaggaagaaaaagaaaga
ttagagtgtgaaaaagccaaaagagaagagaatgaaagaacagaaaaaataagaaaggag
gatcaggagaaattacaatgtgaaaaagcagagagagaaaagaaggaaatggcagaaatg
gatagagaggaagaggaggaaaaggagaaattgatgacagcaaagagggaacaagaagaa
agactcgagagggagaggaacgaacaagaaaaagaggccaaagaaaaacaaacaaaagag
caacaaggaaaccagaaggaagaaaacagccccaaaacaaccgcaacaggtcgaagaact
gccaggaggacacgtggtgcgccgcgtaccacagggccgcatcaagactcgaccacgtca
gccaatgatgacgtcccggcgaggagaacccggtcccgctccaactcttccaattctgta
agctcagagaggtcggtttcaagtgtgagcacccaggggagcagtgggagaggccgaggg
gcgaagaggcaggcagccatcgccacaagcagcaatagaaggactgtcgctgcagagcca
acacaacgggacattcatgatctttctccccggggagtccgttcaaggtccaactctgag
atttccagctgcagcttgagctctcacagcagaggaagaggaggtaggcagcgaggaaga
gggaggaaaacggagtccgactccatcccgcctgccggtagccaaagtggccagaatttg
gctctcgaacctacaaccagaggaaggagaggcaggaatgaagttcccccagaggaggag
aaagaggaggcagattctcagccggctagtaccatcagagggcgacagcgagctaatgca
aacagccctaaacccgcagcgggagatcagaagtccccttcgagtcaaaggtgtgccaga
aaagattcacctctgcctaaaagcaatgtcttgggcagaggccagaaagcagtcaagagt
gagactgtagaggtaccacctgcttctgcagtcagtgatggggaggaggctaaggagaaa
acaaaaggaacaaaaagagattcaaaggcgaatgcagaagaggattccagccggagctcc
aaaatatctgaagtgaaggagcgagcccaaacaatagaagaagcacaagataagagtcaa
gtccaagttgtgagaaaagggagagcatccagcgctcaagctaagaagaaagcaaacgtt
tcctctgctgaattggtggtgaaagaagagagtgaggaaatggaagaggggacagtgcgg
aggagagtcagaggtcgtccatcaatggtccagaaactgaagaaagagaagcaagaagaa
atggaccaggatcctcctgtggaggcatctgagccccagactccgaccagcagcgtatcc
cggaagagaccagcgctgacggactcctcacccgcggcaaagaccactcgctcctcttct
gcctcaccggccgccggtggtcaatggcgagctgccagacaggcctacaaggttctgttc
acaggcgtggtggatgaagaaggggagagagtgttggctcgtctgggaggcagcctggct
gaaggagtggcagacatgaactgtctggtgaccgataaggtgcgcaggactgtcaagttc
ctgtgtgcgttggccaaaggagtccccattgtcaccacgcactggctggaaaggagtggt
agggctgggagcttcctgcctcctaatgcgtttgttgtgaaggatccagagcaggaaaag
aagttcagtttctccttgcaggattccctggagattgccagcaatcagcgtctcctacag
ggctatcggatccatgtcactaagtcagtgaaaccagagccagttcacatgaaagacatc
atttcttgcagtggagctaccttccttcccaaaatgccctcttcttacaagcctcagact
gtggtgatttcctgtgaggaggacttgcggctctgtggcacggcgctctctgaatccgtc
ccagtggtcacagctgagtttattctcacagggatccttcggcagaaagttgaccttgag
acccacaaactttcggcccctgcaaatacgccacagcctgcaggcggcaggggaaggagc
aggaagaagacttag

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