Pungitius pungitius (ninespine stickleback): 119197213
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Entry
119197213 CDS
T07626
Symbol
clstn3
Name
(RefSeq) calsyntenin-3 isoform X1
KO
K22661
calsyntenin 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119197213 (clstn3)
Cell adhesion molecules [BR:
ppug04515
]
Cadherins
Cadherin related
119197213 (clstn3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
119197213
NCBI-ProteinID:
XP_037309226
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Position
11:complement(13647328..13663550)
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AA seq
959 aa
AA seq
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MDRMHFLSLFLLCLTSVADGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFRVHNGPSGSGSVQFEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDC
GEGPDGVNSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDRIVRVEALDADCS
PQYSQICFYDIITPNVPFAIDNDGNIKNTEPLDSKRQRVFTFWVTAFDCGKNRAQADAQV
VITVKPSCKPGWIGWTKRVEYTPGSGSIPLFPSLHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTSALPTLPSSDSSLVFSFNGSNHVAV
VPDSVVSALSGDHFTLQLWMRRGGANIQPSTTPTRGSRKEEETIVCSTVKNDDSFSHYSL
SVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTFDPAL
IHDNGAIPNPAPRQRMSIGACWEPEEKQKEILNNTIPEGKDSVKYVGGYHGLLSGVTVRP
GSVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAVQQVT
YRNSLRFATPGVRPLKLTTSLRCFNEESCLSLKQLEGYLVVLQPDAPQISLSGVGPHLAR
PAPEFEGPRGVPLFPELRIVCSLTHAVNTAAHGMEGGALMSDAVAHTLDGCEVQPLGEEL
NPEREELLVDMDVVRERGLEIINTTAYIAITGAESISVYEDVLRSVRYRLAKGSARFERR
FRLSCSEMNGRYTSNELTLEVNFLHSLDSLYQPSHLLASQQQFLHPSHHAGELSGHTLPN
PHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRVDGAGGEAKEGTSQWDDSALT
IIVNPMESYESRMGISADTEGEEEEEEEEEEVAESPENASDDQRIIIKKEGRDGNARRY
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgcattttctctccctcttcctcctttgcttgacttcggttgccgatggc
aacaaagccaataagcacaagccatggatcgagacagagtaccaggggatcgtcatggag
aacgacaacacggtgctgctcaacccccctctctttgccctggacaaagatgctccgctt
cactacgccggggaaatctgtggcttccgggttcataacggcccctcgggttccggctcc
gtccagtttgaagctgtggttctggaccgctccaccggcgagggcctggtccgctccaag
gagccgctggactgcgagagccagcgtgagcacagcttcaccatccaggcctacgactgc
ggagagggacccgatggagtcaacagcaagaaatcccacaaggccaccgtgcatgttcgt
gttaacgacgtcaatgagttctcccccgtgttcgtcgagcgtcgctacgaggcttcggtc
ccagaaggacgcctgtttgaccggattgtgcgcgtggaggctctggatgccgactgctcc
ccgcagtacagccagatctgcttctatgacatcatcactcctaatgtgccctttgctatc
gacaacgacggtaacatcaagaacaccgagccgctggactcaaagcgtcaacgcgttttt
acattctgggtgaccgcctttgactgtgggaagaaccgagctcaggctgatgcccaggtt
gtcatcaccgtcaagccgtcctgcaaacccggttggatcggatggacaaagcgtgtggag
tacacacccggctcaggcagcatccccttgttccccagcctgcatttggagacctgtgag
gagactgtgtggaacatccaggccaccgtagagcttcagaccggccacatcgggaagggc
tgcgaccgggacagctactccgacagatccgtgcgacggctgtgtggtgccgttaggggt
gaagtggatcttctccctcctccatcccccgctgccaactggacctccgctctgcccact
ctcccctcctctgattcctctctggtcttctccttcaatggatcgaaccacgtggccgtg
gtgccggattcggtcgtctctgcgttgtcgggcgaccacttcaccctgcagctgtggatg
cgaaggggcggcgccaacatccagccctcgaccactccgaccagaggcagccgcaaggag
gaggagactattgtgtgcagcactgtcaagaacgacgattccttctcccactattccctc
tccgtccacggctgccgcctctctctcttctactggcccgacgtctcagccgcacggcca
gtcaagttcttgtggaaactggagcaggtgtgtgacagtgagtggcatcatctttcactc
agtgtccagttcccctccgtgacactgtatgtcgacggtgtgacctttgaccctgctctc
atccacgacaacggcgccatccccaaccctgccccccgccagaggatgtccatcggagcc
tgctgggagcccgaagagaagcagaaggaaatcctaaacaacaccatcccggagggtaaa
gactcagtgaaatatgtgggaggttaccacggcctgttgtcgggggtgacggtgcgtccc
ggcagcgtggagcctcacagtgtggtggagtgtctgtacgcctgcagggaaggcttggac
ttcggggacctggagactctgggctccggcatgaaggtccatgtgaaccccagccagtca
gtgttggtgctggagggagacgacatcgagagctttaatcgtgcagtgcagcaggtcacc
taccgcaactctttacgcttcgccacccccggagtccgacccctcaaactaaccacctcg
ctcagatgtttcaacgaggagagctgcctgtccctcaagcagctggaaggatacctagtg
gttctccagcctgacgcccctcagatctctctctccggggtcggccctcatctggcccgt
cccgcccccgagtttgagggtccccgtggtgtcccccttttccccgagctccggatcgtc
tgttccttgactcatgctgtcaacacggctgcacatgggatggagggaggagccctgatg
tccgacgctgtggctcacactttggacggctgtgaggtccaaccactgggggaggagcta
aacccagagagggaggagcttctggtggacatggatgtagtgcgagagaggggactggaa
atcatcaatactactgcttatattgctatcacaggtgccgaatccatctctgtgtacgag
gacgtccttcgctcagtccgctaccgcctggccaaaggctcagcccgctttgagaggcgg
ttccgcctgtcctgctctgagatgaatggcagatacaccagcaatgagttgactctggag
gtgaacttcctccactctctggacagtttgtaccaaccatcccatttgttggcctcccag
cagcagtttctccatccatcccaccacgctggagagctgagtggacacaccctgcccaat
ccacaccgcaactcagtagtgccaggagcagccacagtcatcataatggtgtgtgtgggt
ttcctggttgtcatggtgatcctcggtgttttccgaattcgctccatccatcgccgcgtt
gacggtgccgggggcgaggccaaggagggtaccagccaatgggacgactctgccctcacc
atcattgtgaaccccatggagtcctatgagtcccgtatgggaatctctgcggacacagag
ggggaagaggaggaggaggaggaagaagaggaggtagcagagtcacccgaaaacgctagc
gatgaccagcgaatcattataaagaaggaggggagggacggcaacgcccgccgctactga
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