Pungitius pungitius (ninespine stickleback): 119197222
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Entry
119197222 CDS
T07626
Symbol
pou2f2b
Name
(RefSeq) POU class 2 homeobox 2a isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119197222 (pou2f2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119197222 (pou2f2b)
03021 Transcription machinery [BR:
ppug03021
]
119197222 (pou2f2b)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
119197222 (pou2f2b)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
119197222 (pou2f2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
POU2F1_C
HTH_31
Com_YlbF
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
119197222
NCBI-ProteinID:
XP_037309246
LinkDB
All DBs
Position
11:complement(13231582..13267281)
Genome browser
AA seq
733 aa
AA seq
DB search
MFVPLPVPFVFQRTAPDLNAWRLKSPLTLRSNSDIRMSKPVEIEKIGADSPMEATDSERN
GPESNHQAQSMKVNPFPLSPSLSSNKNKMEECGEMSPALPLSHGPTPSQTALQHTQLMLT
GSQLAGLTALLPAQQQMLLQQAQAQLLAAAVQQSSAAHAAHAAHAAAQANQQAQAAAANQ
QAQQQHQQQQAGQTGQQAQSQGQGQGTQEQTGQSVPPPPPQLTLSQPIQLTAQDIQQLLQ
LQQLVLVPGHSLPPSAQFLLPQAQQGQQGLLSTPNLISLPQQNQGGLLSASNRMGLQAHR
DKCVEVSGVTTVPSVTSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGND
FSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSIDCTLPSPSSLSSSSMGFDGLPG
RRRKKRTSIETNVRVALERAFMTNQKPTSEEILLIAEQLNMEKEVIRVWFCNRRQKEKRI
NPSSATPPLPSQPPTAQPAHKPPCYSPHMMSSQLSQAVTSLSTTVTTMSPVCPLTSSLTS
THPSLSSAPSPVTPPPPPRSTASPATPSHSTLNLNTGLWRMGKKNGDVSNYITDFAANLR
NTVMGVNTGMNQALLGNNPLATIQALAASGGQLPLSSLEGASKMLLGSSGGQGGCLASSL
FLNHPAFLHMGQNPGAGLISAALAKASQASHFPSASSISPTPCSPSPCSSPASSCSSSEM
AHSPPSLGGAKIE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccttgccggtgccgttcgtgtttcagagaactgcccctgacctcaacgcc
tggcgtctcaagtcccctctgactctgcgctccaactccgatatcaggatgtcaaagcca
gtagaaatcgagaaaataggggctgactcaccgatggaggctacagattcagagcggaat
ggacctgaatcaaatcaccaggctcagtcgatgaaagtcaatccctttcccctttcaccg
tccctgagcagcaacaagaataagatggaggagtgcggtgagatgtccccggctcttcct
ctctctcacggcccgaccccctcacagacggccctgcagcacacacagctcatgctgacc
ggctcccaactagcagggttgacggctctgttgccagcacagcagcagatgttgctgcag
caggctcaggcgcagctcttggccgcagctgtgcagcagtccagtgcagcccacgccgct
catgctgcccacgcagccgcccaagccaatcagcaagctcaggcagccgcagcaaatcag
caagcccagcagcagcaccagcagcagcaggcgggacaaacagggcagcaggcacagtcc
cagggacagggacagggcacacaggaacagacaggccagagtgtcccgcctcctcctccg
cagctcaccctctcccagccaatccagctcaccgcccaggacatccagcagctgctgcag
cttcagcagttggtgttggtgcccggccactcgctcccgccctccgcccagttcctcctc
ccacaggcgcagcagggtcagcaaggactcttatcgacaccaaatctcatttcgctacct
cagcaaaaccaagggggcctgctgtctgcttcaaatagaatgggactccaagcacatcga
gataagtgcgtggaggtgagcggtgtgaccacggtgccctcggtgacctctcaccccgag
gagccaagtgacctggaggagctggaacagttcgcccgcactttcaaacagagacgcatc
aaactgggcttcacacagggagatgttggtttggcaatggggaagctgtatggcaacgac
ttcagtcagaccacaatctctcgctttgaagccctcaacctgagctttaagaacatgtgc
aagctgaagccactgctggagaagtggctcaatgatgcagagaccatgtccatagactgt
accttgcccagccccagctccctgtcctcttcctccatgggctttgacgggcttcctggt
cgccgcagaaagaagagaaccagcatcgaaacgaatgtacgcgttgccctggaacgcgca
ttcatgacgaaccagaagcctacctcagaggagatcctgctgatcgcagagcagctcaac
atggagaaggaggtgatccgagtctggttctgcaaccgccggcagaaggagaaacgcatc
aatccctccagtgccacccctcccctgcccagccagccccccactgcccaaccagcgcac
aaaccgccctgctacagccctcacatgatgtccagccagctgtcgcaggccgtgaccagt
ctcagcacaacagtgaccaccatgtcgcctgtctgccccctgacttccagcctcacctcc
acccacccctccctcagctccgcaccatccccagtgactcctcctcctcctccccgcagc
acggccagcccagccactcccagccacagcacactcaacctcaacacaggcttatggcgt
atgggtaaaaagaacggtgacgtgtctaactacatcaccgattttgctgcaaacttgagg
aacactgtgatgggagttaacacagggatgaaccaagccctcctcggtaataatcccctg
gccactatccaagccctagcagccagtggtggccagctgcctctttccagtcttgagggg
gccagtaagatgttactggggagctctgggggccagggagggtgcctcgcctcctccctc
ttcctcaaccaccccgccttcctccacatgggccagaaccccggtgctggactgatcagc
gctgccctggccaaggcctcccaggcctcccacttcccctctgctagcagcataagcccc
accccctgctccccctccccctgctctagccccgcctcttcctgctcctccagcgaaatg
gcacacagcccaccctctctgggcggagccaagattgagtga
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