Pungitius pungitius (ninespine stickleback): 119197249
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Entry
119197249 CDS
T07626
Symbol
tubb5
Name
(RefSeq) tubulin beta-5 chain
KO
K07375
tubulin beta
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04145
Phagosome
ppug04517
IgSF CAM signaling
ppug04540
Gap junction
ppug04814
Motor proteins
ppug05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119197249 (tubb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
119197249 (tubb5)
09144 Cellular community - eukaryotes
04540 Gap junction
119197249 (tubb5)
09142 Cell motility
04814 Motor proteins
119197249 (tubb5)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119197249 (tubb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119197249 (tubb5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119197249 (tubb5)
04147 Exosome [BR:
ppug04147
]
119197249 (tubb5)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
119197249 (tubb5)
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
119197249 (tubb5)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119197249 (tubb5)
Exosomal proteins of colorectal cancer cells
119197249 (tubb5)
Exosomal proteins of bladder cancer cells
119197249 (tubb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
DUF5008
Motif
Other DBs
NCBI-GeneID:
119197249
NCBI-ProteinID:
XP_037309307
LinkDB
All DBs
Position
11:complement(13486912..13491267)
Genome browser
AA seq
444 aa
AA seq
DB search
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEDDA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaatcgttcacatccaggccggccagtgcggtaaccagattggagccaagttc
tgggaagtcatcagcgatgaacatggcatcgaccccacagggacttaccacggagacagt
gacctgcagctggacaggatcagtgtctactacaatgaggccactggtggcaaatatgtg
cctcgagccattctggtagacttggaacctggcaccatggactctgtgaggtctggaccc
tttgggcagatcttcaggcctgacaattttgtatttggtcagagcggtgctggaaacaac
tgggccaaaggtcactacacagagggagccgagttggtggactcagtcctagatgtggtc
cgcaaagagtcagagagctgtgactgcctgcagggcttccagctcacccactctcttggt
ggaggaaccgggtccggcatgggaaccctgctcatcagcaagattcgtgaggagtaccct
gaccgtatcatgaacaccttcagtgtggtgccttcgcccaaggtttcagacacggtggtt
gagccctacaatgccaccctctcagtccaccagcttgtagagaacacagatgaaacatac
tgcattgacaatgaggccctgtacgacatctgcttccgtactctgaaactgaccacaccc
acctacggagaccttaaccacctggtgtcggccaccatgagtggggtcaccacctgcctg
cgcttccccgggcagctcaatgctgatcttcgcaaacttgcggtcaacatggtgcctttc
ccccgtttgcacttcttcatgcctggctttgcccccctgaccagccgaggcagtcagcag
tacagagccctcacagttcccgagctcacccagcaggtgttcgatgccaagaatatgatg
gccgcatgcgacccacgccacggacgctacctgaccgttgccgccgtgttccgtggacgc
atgtccatgaaggaagtcgacgagcagatgctgaacgtccagaacaagaacagcagctac
ttcgtcgaatggattcccaacaacgtgaagaccgccgtctgtgacattccaccccgtggc
ctcaagatggccgtcacttttattggcaacagcacagccatccaggagctgttcaagcgt
atctcagagcagttcacagccatgttccgccgtaaggccttcttgcattggtacacaggt
gaaggtatggatgagatggagttcaccgaagcagagagcaacatgaatgatctggtgtcg
gagtatcagcagtaccaggatgccactgctgaggaagagggtgaatttgaggaggaggct
gaagatgacgcttaa
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